RNA–Protein interactions for RNA: ENST00000482965.1

SNX4-205, Transcript of sorting nexin 4, humanhuman

TSL 3

Gene SNX4, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-205ENST00000482965 CHADLQ6NUI6 762 aa10.86□□□□□ -0.67
SNX4-205ENST00000482965 USP50Q70EL3 339 aaPredicted RBP10.86□□□□□ -0.67
SNX4-205ENST00000482965 ARAP2Q8WZ64 1704 aa10.86□□□□□ -0.67
SNX4-205ENST00000482965 MYO3BQ8WXR4 1341 aa10.85□□□□□ -0.67
SNX4-205ENST00000482965 HMMRO75330 724 aa10.85□□□□□ -0.67
SNX4-205ENST00000482965 FRAT2O75474 233 aaPredicted RBP10.85□□□□□ -0.67
SNX4-205ENST00000482965 BCAMP50895 628 aa10.85□□□□□ -0.67
SNX4-205ENST00000482965 FBXO33Q7Z6M2 555 aa10.85□□□□□ -0.67
SNX4-205ENST00000482965 RPAP2Q8IXW5 612 aaPredicted RBP10.85□□□□□ -0.67
SNX4-205ENST00000482965 TDRD7Q8NHU6 1098 aaKnown RBP10.85□□□□□ -0.67
SNX4-205ENST00000482965 TRPM4Q8TD43 1214 aa10.85□□□□□ -0.67
SNX4-205ENST00000482965 GMLQ99445 158 aa10.85□□□□□ -0.67
SNX4-205ENST00000482965 MXD3Q9BW11 206 aa10.85□□□□□ -0.67
SNX4-205ENST00000482965 IQSEC3Q9UPP2 1182 aaPredicted RBP10.85□□□□□ -0.67
SNX4-205ENST00000482965 JAG2Q9Y219 1238 aa10.85□□□□□ -0.67
SNX4-205ENST00000482965 AKAP2Q9Y2D5 859 aa10.85□□□□□ -0.67
SNX4-205ENST00000482965 POLR2AP24928 1970 aaKnown RBP10.85□□□□□ -0.67
SNX4-205ENST00000482965 SASH1O94885 1247 aa10.84□□□□□ -0.67
SNX4-205ENST00000482965 USP17L8P0C7I0 530 aa10.84□□□□□ -0.67
SNX4-205ENST00000482965 CHAF1AQ13111 956 aaPredicted RBP10.84□□□□□ -0.67
SNX4-205ENST00000482965 TBC1D10BQ4KMP7 808 aaPredicted RBP10.84□□□□□ -0.67
SNX4-205ENST00000482965 RBM26Q5T8P6 1007 aaKnown RBP10.84□□□□□ -0.67
SNX4-205ENST00000482965 SAMD7Q7Z3H4 446 aa10.84□□□□□ -0.67
SNX4-205ENST00000482965 FAM205AQ6ZU69 1335 aa10.84□□□□□ -0.67
SNX4-205ENST00000482965 A0A1B0GUL7 405 aa10.83□□□□□ -0.68
SNX4-205ENST00000482965 ADORA1P30542 326 aa10.83□□□□□ -0.68
SNX4-205ENST00000482965 ZNF280AP59817 542 aaPredicted RBP10.83□□□□□ -0.68
SNX4-205ENST00000482965 TIMM10P62072 90 aa10.83□□□□□ -0.68
SNX4-205ENST00000482965 FKBP1AP62942 108 aaKnown RBP10.83□□□□□ -0.68
SNX4-205ENST00000482965 KIF4BQ2VIQ3 1234 aa10.83□□□□□ -0.68
SNX4-205ENST00000482965 MAP1SQ66K74 1059 aaPredicted RBP10.83□□□□□ -0.68
SNX4-205ENST00000482965 KIAA0825Q8IV33 1275 aa10.83□□□□□ -0.68
SNX4-205ENST00000482965 OGFOD1Q8N543 542 aa10.83□□□□□ -0.68
SNX4-205ENST00000482965 NEUROD6Q96NK8 337 aa10.83□□□□□ -0.68
SNX4-205ENST00000482965 GNL3LQ9NVN8 582 aaKnown RBP10.83□□□□□ -0.68
SNX4-205ENST00000482965 HDAC9Q9UKV0 1011 aa10.83□□□□□ -0.68
SNX4-205ENST00000482965 NOP58Q9Y2X3 529 aaKnown RBP10.83□□□□□ -0.68
SNX4-205ENST00000482965 HSPA6P17066 643 aa10.82□□□□□ -0.68
SNX4-205ENST00000482965 HIRAP54198 1017 aaPredicted RBP10.82□□□□□ -0.68
SNX4-205ENST00000482965 HSP90AB4PQ58FF6 505 aa10.82□□□□□ -0.68
SNX4-205ENST00000482965 MFSD14BQ5SR56 506 aa10.82□□□□□ -0.68
SNX4-205ENST00000482965 GORABQ5T7V8 394 aa10.82□□□□□ -0.68
SNX4-205ENST00000482965 ERC1Q8IUD2 1116 aa10.82□□□□□ -0.68
SNX4-205ENST00000482965 CNTROBQ8N137 903 aa10.82□□□□□ -0.68
SNX4-205ENST00000482965 CERS5Q8N5B7 392 aa10.82□□□□□ -0.68
SNX4-205ENST00000482965 XAGE2Q96GT9 111 aa10.82□□□□□ -0.68
SNX4-205ENST00000482965 CRBNQ96SW2 442 aa10.82□□□□□ -0.68
SNX4-205ENST00000482965 MYOZ2Q9NPC6 264 aa10.82□□□□□ -0.68
SNX4-205ENST00000482965 EXOC6BQ9Y2D4 811 aa10.82□□□□□ -0.68
SNX4-205ENST00000482965 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.82□□□□□ -0.68
SNX4-205ENST00000482965 TRPM7Q96QT4 1865 aa10.81□□□□□ -0.68
SNX4-205ENST00000482965 F8W031 263 aaPredicted RBP10.81□□□□□ -0.68
SNX4-205ENST00000482965 EGFRP00533 1210 aa10.81□□□□□ -0.68
SNX4-205ENST00000482965 PHKA1P46020 1223 aa10.81□□□□□ -0.68
SNX4-205ENST00000482965 MMP14P50281 582 aa10.81□□□□□ -0.68
SNX4-205ENST00000482965 CCDC102BQ68D86 513 aa10.81□□□□□ -0.68
SNX4-205ENST00000482965 SIRT2Q8IXJ6 389 aa10.81□□□□□ -0.68
SNX4-205ENST00000482965 ZC3H15Q8WU90 426 aaKnown RBP10.81□□□□□ -0.68
SNX4-205ENST00000482965 TBC1D22AQ8WUA7 517 aa10.81□□□□□ -0.68
SNX4-205ENST00000482965 GPR108Q9NPR9 543 aa10.81□□□□□ -0.68
SNX4-205ENST00000482965 TNNI3KQ59H18 835 aa10.8□□□□□ -0.68
SNX4-205ENST00000482965 WDR66Q8TBY9 1149 aa10.8□□□□□ -0.68
SNX4-205ENST00000482965 DENND2AQ9ULE3 1009 aa10.8□□□□□ -0.68
SNX4-205ENST00000482965 SUPT16HQ9Y5B9 1047 aaKnown RBP10.8□□□□□ -0.68
SNX4-205ENST00000482965 FPGT-TNNI3KV9GXZ4 949 aa10.8□□□□□ -0.68
SNX4-205ENST00000482965 ECM29Q5VYK3 1845 aa10.79□□□□□ -0.68
SNX4-205ENST00000482965 APBB1O00213 710 aa10.79□□□□□ -0.68
SNX4-205ENST00000482965 SEMA3EO15041 775 aa10.79□□□□□ -0.68
SNX4-205ENST00000482965 ITGBL1O95965 494 aaPredicted RBP10.79□□□□□ -0.68
SNX4-205ENST00000482965 APLP1P51693 650 aa10.79□□□□□ -0.68
SNX4-205ENST00000482965 SCARF1Q14162 830 aa10.79□□□□□ -0.68
SNX4-205ENST00000482965 DCPSQ96C86 337 aaKnown RBP10.79□□□□□ -0.68
SNX4-205ENST00000482965 GGA3Q9NZ52 723 aa10.79□□□□□ -0.68
SNX4-205ENST00000482965 PGAP2Q9UHJ9 254 aa10.79□□□□□ -0.68
SNX4-205ENST00000482965 TTF2Q9UNY4 1162 aaKnown RBP10.79□□□□□ -0.68
SNX4-205ENST00000482965 COL1A1P02452 1464 aaPredicted RBP10.79□□□□□ -0.68
SNX4-205ENST00000482965 RAB11FIP3O75154 756 aa10.78□□□□□ -0.68
SNX4-205ENST00000482965 RBM5P52756 815 aaKnown RBP eCLIP10.78□□□□□ -0.68
SNX4-205ENST00000482965 DLGAP5Q15398 846 aa10.78□□□□□ -0.68
SNX4-205ENST00000482965 CFAP100Q494V2 611 aa10.78□□□□□ -0.68
SNX4-205ENST00000482965 ANGEL2Q5VTE6 544 aaKnown RBP10.78□□□□□ -0.68
SNX4-205ENST00000482965 CDC37L1Q7L3B6 337 aa10.78□□□□□ -0.68
SNX4-205ENST00000482965 KRT26Q7Z3Y9 468 aa10.78□□□□□ -0.68
SNX4-205ENST00000482965 RHPN1Q8TCX5 695 aa10.78□□□□□ -0.68
SNX4-205ENST00000482965 KIF1BPQ96EK5 621 aa10.78□□□□□ -0.68
SNX4-205ENST00000482965 DBNDD2Q9BQY9 259 aa10.78□□□□□ -0.68
SNX4-205ENST00000482965 GLIS2Q9BZE0 524 aaPredicted RBP10.78□□□□□ -0.68
SNX4-205ENST00000482965 CCDC8Q9H0W5 538 aaPredicted RBP10.78□□□□□ -0.68
SNX4-205ENST00000482965 ASTN2O75129 1339 aaPredicted RBP10.78□□□□□ -0.68
SNX4-205ENST00000482965 PASKQ96RG2 1323 aa10.78□□□□□ -0.68
SNX4-205ENST00000482965 TRAF5O00463 557 aa10.77□□□□□ -0.69
SNX4-205ENST00000482965 WNT10BO00744 389 aa10.77□□□□□ -0.69
SNX4-205ENST00000482965 UQCRFS1P1P0C7P4 283 aa10.77□□□□□ -0.69
SNX4-205ENST00000482965 RASGRF1Q13972 1273 aa10.77□□□□□ -0.69
SNX4-205ENST00000482965 GRIK5Q16478 980 aa10.77□□□□□ -0.69
SNX4-205ENST00000482965 NBPF9Q3BBW0 867 aa10.77□□□□□ -0.69
SNX4-205ENST00000482965 CCDC158Q5M9N0 1113 aa10.77□□□□□ -0.69
SNX4-205ENST00000482965 TTC39AQ5SRH9 613 aa10.77□□□□□ -0.69
SNX4-205ENST00000482965 USP48Q86UV5 1035 aa10.77□□□□□ -0.69
SNX4-205ENST00000482965 AACSQ86V21 672 aa10.77□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms