RNA–Protein interactions for RNA: ENST00000482771.1

TMEM54-206, Transcript of transmembrane protein 54, humanhuman

TSL 2

Gene TMEM54, Length 569 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-206ENST00000482771 ZBTB48P10074 688 aaPredicted RBP16.37■□□□□ 0.21
TMEM54-206ENST00000482771 CFAP100Q494V2 611 aa16.37■□□□□ 0.21
TMEM54-206ENST00000482771 NBPF12Q5TAG4 269 aaPredicted RBP16.37■□□□□ 0.21
TMEM54-206ENST00000482771 OTOP1Q7RTM1 612 aa16.37■□□□□ 0.21
TMEM54-206ENST00000482771 MYH16Q9H6N6 1097 aa16.37■□□□□ 0.21
TMEM54-206ENST00000482771 KIAA0100Q14667 2235 aaKnown RBP16.37■□□□□ 0.21
TMEM54-206ENST00000482771 MYO1BO43795 1136 aa16.36■□□□□ 0.21
TMEM54-206ENST00000482771 USP2O75604 605 aaPredicted RBP16.36■□□□□ 0.21
TMEM54-206ENST00000482771 FLIIQ13045 1269 aa16.36■□□□□ 0.21
TMEM54-206ENST00000482771 FKBP5Q13451 457 aaPredicted RBP16.36■□□□□ 0.21
TMEM54-206ENST00000482771 INTS3Q68E01 1043 aaKnown RBP16.36■□□□□ 0.21
TMEM54-206ENST00000482771 DNAAF4Q8WXU2 420 aa16.36■□□□□ 0.21
TMEM54-206ENST00000482771 VEZTQ9HBM0 779 aa16.36■□□□□ 0.21
TMEM54-206ENST00000482771 JAG2Q9Y219 1238 aa16.36■□□□□ 0.21
TMEM54-206ENST00000482771 PPP2R3BQ9Y5P8 575 aa16.36■□□□□ 0.21
TMEM54-206ENST00000482771 POTEFA5A3E0 1075 aa16.35■□□□□ 0.21
TMEM54-206ENST00000482771 SPDYE2BA6NHP3 402 aa16.35■□□□□ 0.21
TMEM54-206ENST00000482771 PLIN1O60240 522 aa16.35■□□□□ 0.21
TMEM54-206ENST00000482771 SPDYE6P0CI01 402 aa16.35■□□□□ 0.21
TMEM54-206ENST00000482771 IL1R1P14778 569 aa16.35■□□□□ 0.21
TMEM54-206ENST00000482771 RBM5P52756 815 aaKnown RBP eCLIP16.35■□□□□ 0.21
TMEM54-206ENST00000482771 IFIT5Q13325 482 aaKnown RBP16.35■□□□□ 0.21
TMEM54-206ENST00000482771 OTUD7BQ6GQQ9 843 aa16.35■□□□□ 0.21
TMEM54-206ENST00000482771 C15orf52Q6ZUT6 534 aaKnown RBP16.35■□□□□ 0.21
TMEM54-206ENST00000482771 WWC1Q8IX03 1113 aa16.35■□□□□ 0.21
TMEM54-206ENST00000482771 LINS1Q8NG48 757 aa16.35■□□□□ 0.21
TMEM54-206ENST00000482771 CHMP3Q9Y3E7 222 aa16.35■□□□□ 0.21
TMEM54-206ENST00000482771 IRS2Q9Y4H2 1338 aa16.35■□□□□ 0.21
TMEM54-206ENST00000482771 UNCXA6NJT0 531 aa16.34■□□□□ 0.21
TMEM54-206ENST00000482771 IREB2P48200 963 aaKnown RBP16.34■□□□□ 0.21
TMEM54-206ENST00000482771 RASA3Q14644 834 aa16.34■□□□□ 0.21
TMEM54-206ENST00000482771 ZNF804AQ7Z570 1209 aa16.34■□□□□ 0.21
TMEM54-206ENST00000482771 GCC1Q96CN9 775 aa16.34■□□□□ 0.21
TMEM54-206ENST00000482771 ERO1AQ96HE7 468 aa16.34■□□□□ 0.21
TMEM54-206ENST00000482771 PTPN22Q9Y2R2 807 aa16.34■□□□□ 0.21
TMEM54-206ENST00000482771 GJA5P36382 358 aa16.33■□□□□ 0.2
TMEM54-206ENST00000482771 FOXO4P98177 505 aa16.33■□□□□ 0.2
TMEM54-206ENST00000482771 CRHR2Q13324 411 aa16.33■□□□□ 0.2
TMEM54-206ENST00000482771 CD99L2Q8TCZ2 262 aa16.33■□□□□ 0.2
TMEM54-206ENST00000482771 PTPN18Q99952 460 aa16.33■□□□□ 0.2
TMEM54-206ENST00000482771 AOX1Q06278 1338 aa16.33■□□□□ 0.2
TMEM54-206ENST00000482771 MYH3P11055 1940 aa16.32■□□□□ 0.2
TMEM54-206ENST00000482771 FKBP1AP62942 108 aaKnown RBP16.32■□□□□ 0.2
TMEM54-206ENST00000482771 CCDC27Q2M243 656 aa16.32■□□□□ 0.2
TMEM54-206ENST00000482771 ANKRD13AQ8IZ07 590 aa16.32■□□□□ 0.2
TMEM54-206ENST00000482771 ZNF594Q96JF6 807 aaPredicted RBP16.32■□□□□ 0.2
TMEM54-206ENST00000482771 SPEF2Q9C093 1822 aa16.32■□□□□ 0.2
TMEM54-206ENST00000482771 EFCC1Q9HA90 598 aa16.32■□□□□ 0.2
TMEM54-206ENST00000482771 COL1A1P02452 1464 aaPredicted RBP16.31■□□□□ 0.2
TMEM54-206ENST00000482771 EN2P19622 333 aaPredicted RBP16.31■□□□□ 0.2
TMEM54-206ENST00000482771 SP3Q02447 781 aa16.31■□□□□ 0.2
TMEM54-206ENST00000482771 CCDC184Q52MB2 194 aa16.31■□□□□ 0.2
TMEM54-206ENST00000482771 LMBR1LQ6UX01 489 aa16.31■□□□□ 0.2
TMEM54-206ENST00000482771 LDHAL6AQ6ZMR3 332 aa16.31■□□□□ 0.2
TMEM54-206ENST00000482771 TESPA1A2RU30 521 aaPredicted RBP16.3■□□□□ 0.2
TMEM54-206ENST00000482771 F6X3S4 739 aa16.3■□□□□ 0.2
TMEM54-206ENST00000482771 VAMP4O75379 141 aa16.3■□□□□ 0.2
TMEM54-206ENST00000482771 HABP4Q5JVS0 413 aaKnown RBP16.3■□□□□ 0.2
TMEM54-206ENST00000482771 EPHA10Q5JZY3 1008 aa16.3■□□□□ 0.2
TMEM54-206ENST00000482771 ELP3Q9H9T3 547 aa16.3■□□□□ 0.2
TMEM54-206ENST00000482771 CNNM1Q9NRU3 951 aa16.3■□□□□ 0.2
TMEM54-206ENST00000482771 ZNF70Q9UC06 446 aaPredicted RBP16.3■□□□□ 0.2
TMEM54-206ENST00000482771 ZNF646O15015 1829 aaPredicted RBP16.3■□□□□ 0.2
TMEM54-206ENST00000482771 SSC5DA1L4H1 1573 aa16.3■□□□□ 0.2
TMEM54-206ENST00000482771 CAP1Q01518 475 aa16.29■□□□□ 0.2
TMEM54-206ENST00000482771 CCDC57Q2TAC2 916 aa16.29■□□□□ 0.2
TMEM54-206ENST00000482771 TAF7LQ5H9L4 462 aa16.29■□□□□ 0.2
TMEM54-206ENST00000482771 OPTNQ96CV9 577 aa16.29■□□□□ 0.2
TMEM54-206ENST00000482771 TDRD3Q9H7E2 651 aaKnown RBP16.29■□□□□ 0.2
TMEM54-206ENST00000482771 IL16Q14005 1332 aa16.28■□□□□ 0.2
TMEM54-206ENST00000482771 SPDYE2Q495Y8 402 aa16.28■□□□□ 0.2
TMEM54-206ENST00000482771 MFSD14BQ5SR56 506 aa16.28■□□□□ 0.2
TMEM54-206ENST00000482771 BEND3Q5T5X7 828 aa16.28■□□□□ 0.2
TMEM54-206ENST00000482771 TDRD7Q8NHU6 1098 aaKnown RBP16.28■□□□□ 0.2
TMEM54-206ENST00000482771 ARMC5Q96C12 935 aa16.28■□□□□ 0.2
TMEM54-206ENST00000482771 MS4A4AQ96JQ5 239 aa16.28■□□□□ 0.2
TMEM54-206ENST00000482771 TMEM106CQ9BVX2 250 aa16.28■□□□□ 0.2
TMEM54-206ENST00000482771 TTF2Q9UNY4 1162 aaKnown RBP16.28■□□□□ 0.2
TMEM54-206ENST00000482771 FAM205AQ6ZU69 1335 aa16.27■□□□□ 0.2
TMEM54-206ENST00000482771 HIBADHP31937 336 aaKnown RBP16.27■□□□□ 0.2
TMEM54-206ENST00000482771 GYG1P46976 350 aa16.27■□□□□ 0.2
TMEM54-206ENST00000482771 MAP3K9P80192 1104 aa16.27■□□□□ 0.2
TMEM54-206ENST00000482771 TNFAIP1Q13829 316 aa16.27■□□□□ 0.2
TMEM54-206ENST00000482771 PPP1R3FQ6ZSY5 799 aaPredicted RBP16.27■□□□□ 0.2
TMEM54-206ENST00000482771 DZIP1LQ8IYY4 767 aaKnown RBP16.27■□□□□ 0.2
TMEM54-206ENST00000482771 CNKSR2Q8WXI2 1034 aa16.27■□□□□ 0.2
TMEM54-206ENST00000482771 FAM84BQ96KN1 310 aaPredicted RBP16.27■□□□□ 0.2
TMEM54-206ENST00000482771 SERPINA10Q9UK55 444 aa16.27■□□□□ 0.2
TMEM54-206ENST00000482771 SALL2Q9Y467 1007 aaPredicted RBP16.27■□□□□ 0.2
TMEM54-206ENST00000482771 MKI67P46013 3256 aaKnown RBP16.26■□□□□ 0.19
TMEM54-206ENST00000482771 TCP10L2B9ZVM9 353 aa16.26■□□□□ 0.19
TMEM54-206ENST00000482771 EXOSC9Q06265 439 aaKnown RBP16.26■□□□□ 0.19
TMEM54-206ENST00000482771 CDAN1Q8IWY9 1227 aa16.26■□□□□ 0.19
TMEM54-206ENST00000482771 BRI3BPQ8WY22 251 aa16.26■□□□□ 0.19
TMEM54-206ENST00000482771 TEPSINQ96N21 525 aa16.26■□□□□ 0.19
TMEM54-206ENST00000482771 ZFYVE28Q9HCC9 887 aa16.26■□□□□ 0.19
TMEM54-206ENST00000482771 FANCIQ9NVI1 1328 aa16.25■□□□□ 0.19
TMEM54-206ENST00000482771 GTF2A2P52657 109 aa16.25■□□□□ 0.19
TMEM54-206ENST00000482771 UBE4AQ14139 1066 aa16.25■□□□□ 0.19
TMEM54-206ENST00000482771 ARHGEF6Q15052 776 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms