RNA–Protein interactions for RNA: ENST00000482741.1

TVP23B-203, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 2

Gene TVP23B, Length 3,298 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-203ENST00000482741 WASHC4Q2M389 1173 aa9.63□□□□□ -0.87
TVP23B-203ENST00000482741 EAPPQ56P03 285 aaPredicted RBP9.63□□□□□ -0.87
TVP23B-203ENST00000482741 BEND3Q5T5X7 828 aa9.63□□□□□ -0.87
TVP23B-203ENST00000482741 DBF4Q9UBU7 674 aaPredicted RBP9.63□□□□□ -0.87
TVP23B-203ENST00000482741 WWC3Q9ULE0 1092 aa9.63□□□□□ -0.87
TVP23B-203ENST00000482741 PPFIA4O75335 1185 aa9.62□□□□□ -0.87
TVP23B-203ENST00000482741 LTBP3Q9NS15 1303 aa9.62□□□□□ -0.87
TVP23B-203ENST00000482741 ZBTB7BO15156 539 aaPredicted RBP9.62□□□□□ -0.87
TVP23B-203ENST00000482741 NAA30Q147X3 362 aaPredicted RBP9.62□□□□□ -0.87
TVP23B-203ENST00000482741 CRY2Q49AN0 593 aa9.62□□□□□ -0.87
TVP23B-203ENST00000482741 PIGBQ92521 554 aa9.62□□□□□ -0.87
TVP23B-203ENST00000482741 HDAC5Q9UQL6 1122 aa9.62□□□□□ -0.87
TVP23B-203ENST00000482741 P4HBP07237 508 aaKnown RBP9.62□□□□□ -0.87
TVP23B-203ENST00000482741 SMC5Q8IY18 1101 aa9.62□□□□□ -0.87
TVP23B-203ENST00000482741 FAM174AQ8TBP5 190 aa9.62□□□□□ -0.87
TVP23B-203ENST00000482741 USP17L15C9J2P7 530 aa9.61□□□□□ -0.87
TVP23B-203ENST00000482741 USP17L10C9JJH3 530 aa9.61□□□□□ -0.87
TVP23B-203ENST00000482741 USP17L13C9JLJ4 530 aa9.61□□□□□ -0.87
TVP23B-203ENST00000482741 USP17L12C9JPN9 530 aa9.61□□□□□ -0.87
TVP23B-203ENST00000482741 USP17L11C9JVI0 530 aa9.61□□□□□ -0.87
TVP23B-203ENST00000482741 USP17L21D6R901 530 aa9.61□□□□□ -0.87
TVP23B-203ENST00000482741 USP17L18D6R9N7 530 aa9.61□□□□□ -0.87
TVP23B-203ENST00000482741 USP17L22D6RA61 530 aa9.61□□□□□ -0.87
TVP23B-203ENST00000482741 USP17L17D6RBQ6 530 aa9.61□□□□□ -0.87
TVP23B-203ENST00000482741 USP17L19D6RCP7 530 aa9.61□□□□□ -0.87
TVP23B-203ENST00000482741 USP17L20D6RJB6 530 aa9.61□□□□□ -0.87
TVP23B-203ENST00000482741 TM4SF1P30408 202 aa9.61□□□□□ -0.87
TVP23B-203ENST00000482741 USP5P45974 858 aa9.61□□□□□ -0.87
TVP23B-203ENST00000482741 FKBP1AP62942 108 aaKnown RBP9.61□□□□□ -0.87
TVP23B-203ENST00000482741 USP17L24Q0WX57 530 aa9.61□□□□□ -0.87
TVP23B-203ENST00000482741 ZFYVE27Q5T4F4 411 aa9.61□□□□□ -0.87
TVP23B-203ENST00000482741 TMC4Q7Z404 712 aa9.61□□□□□ -0.87
TVP23B-203ENST00000482741 SLC16A10Q8TF71 515 aa9.61□□□□□ -0.87
TVP23B-203ENST00000482741 USP17L5A8MUK1 530 aa9.61□□□□□ -0.87
TVP23B-203ENST00000482741 EVI5O60447 810 aa9.61□□□□□ -0.87
TVP23B-203ENST00000482741 MVPQ14764 893 aaKnown RBP9.61□□□□□ -0.87
TVP23B-203ENST00000482741 ZNF530Q6P9A1 599 aaPredicted RBP9.61□□□□□ -0.87
TVP23B-203ENST00000482741 ATF7IPQ6VMQ6 1270 aa9.61□□□□□ -0.87
TVP23B-203ENST00000482741 DDX17Q92841 729 aaKnown RBP9.61□□□□□ -0.87
TVP23B-203ENST00000482741 ZMYM6O95789 1325 aa9.61□□□□□ -0.87
TVP23B-203ENST00000482741 MAP3K15Q6ZN16 1313 aa9.61□□□□□ -0.87
TVP23B-203ENST00000482741 RPS6KA4O75676 772 aa9.6□□□□□ -0.87
TVP23B-203ENST00000482741 HSP90AB3PQ58FF7 597 aa9.6□□□□□ -0.87
TVP23B-203ENST00000482741 PXYLP1Q8TE99 480 aa9.6□□□□□ -0.87
TVP23B-203ENST00000482741 SCAMP3O14828 347 aaKnown RBP9.6□□□□□ -0.87
TVP23B-203ENST00000482741 S100BP04271 92 aaPredicted RBP9.6□□□□□ -0.87
TVP23B-203ENST00000482741 DPYDQ12882 1025 aa9.6□□□□□ -0.87
TVP23B-203ENST00000482741 MYO5AQ9Y4I1 1855 aaKnown RBP9.6□□□□□ -0.87
TVP23B-203ENST00000482741 CCDC189A1A4V9 331 aa9.6□□□□□ -0.87
TVP23B-203ENST00000482741 EXOC5O00471 708 aa9.6□□□□□ -0.87
TVP23B-203ENST00000482741 LILRB3O75022 631 aa9.6□□□□□ -0.87
TVP23B-203ENST00000482741 CBLBQ13191 982 aa9.6□□□□□ -0.87
TVP23B-203ENST00000482741 C1orf141Q5JVX7 400 aa9.6□□□□□ -0.87
TVP23B-203ENST00000482741 METTL22Q9BUU2 404 aaPredicted RBP9.6□□□□□ -0.87
TVP23B-203ENST00000482741 RCAN3Q9UKA8 241 aa9.6□□□□□ -0.87
TVP23B-203ENST00000482741 IPO8O15397 1037 aaKnown RBP9.59□□□□□ -0.87
TVP23B-203ENST00000482741 CAMTA2O94983 1202 aa9.59□□□□□ -0.87
TVP23B-203ENST00000482741 HOXA10P31260 410 aaPredicted RBP9.59□□□□□ -0.87
TVP23B-203ENST00000482741 KSR2Q6VAB6 950 aa9.59□□□□□ -0.87
TVP23B-203ENST00000482741 STAP2Q9UGK3 403 aa9.59□□□□□ -0.87
TVP23B-203ENST00000482741 FRMPD3Q5JV73 1810 aa9.59□□□□□ -0.87
TVP23B-203ENST00000482741 DDB1Q16531 1140 aa9.59□□□□□ -0.87
TVP23B-203ENST00000482741 PARP10Q53GL7 1025 aa9.59□□□□□ -0.87
TVP23B-203ENST00000482741 METTL16Q86W50 562 aaKnown RBP9.59□□□□□ -0.87
TVP23B-203ENST00000482741 SSH3Q8TE77 659 aa9.59□□□□□ -0.87
TVP23B-203ENST00000482741 LRRC37A2A6NM11 1700 aa9.59□□□□□ -0.87
TVP23B-203ENST00000482741 RFX5P48382 616 aaPredicted RBP9.58□□□□□ -0.88
TVP23B-203ENST00000482741 CCDC191Q8NCU4 936 aa9.58□□□□□ -0.88
TVP23B-203ENST00000482741 ERCC3P19447 782 aa9.58□□□□□ -0.88
TVP23B-203ENST00000482741 SF3B3Q15393 1217 aaKnown RBP9.58□□□□□ -0.88
TVP23B-203ENST00000482741 RPUSD2Q8IZ73 545 aaKnown RBP9.58□□□□□ -0.88
TVP23B-203ENST00000482741 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.58□□□□□ -0.88
TVP23B-203ENST00000482741 C8orf58Q8NAV2 365 aa9.58□□□□□ -0.88
TVP23B-203ENST00000482741 KANSL2Q9H9L4 492 aa9.58□□□□□ -0.88
TVP23B-203ENST00000482741 NID2Q14112 1375 aa9.58□□□□□ -0.88
TVP23B-203ENST00000482741 F6X3S4 739 aa9.58□□□□□ -0.88
TVP23B-203ENST00000482741 WDHD1O75717 1129 aaPredicted RBP9.58□□□□□ -0.88
TVP23B-203ENST00000482741 RPAP2Q8IXW5 612 aaPredicted RBP9.58□□□□□ -0.88
TVP23B-203ENST00000482741 LGR6Q9HBX8 967 aa9.58□□□□□ -0.88
TVP23B-203ENST00000482741 VTI1BQ9UEU0 232 aa9.58□□□□□ -0.88
TVP23B-203ENST00000482741 OTOFQ9HC10 1997 aa9.58□□□□□ -0.88
TVP23B-203ENST00000482741 SLX4Q8IY92 1834 aa9.57□□□□□ -0.88
TVP23B-203ENST00000482741 PCCAP05165 728 aaPredicted RBP9.57□□□□□ -0.88
TVP23B-203ENST00000482741 TWISTNBQ3B726 338 aaPredicted RBP9.57□□□□□ -0.88
TVP23B-203ENST00000482741 NOP9Q86U38 636 aaKnown RBP9.57□□□□□ -0.88
TVP23B-203ENST00000482741 RTFDC1Q9BY42 306 aaPredicted RBP9.57□□□□□ -0.88
TVP23B-203ENST00000482741 DOCK1Q14185 1865 aa9.57□□□□□ -0.88
TVP23B-203ENST00000482741 SALL1Q9NSC2 1324 aa9.57□□□□□ -0.88
TVP23B-203ENST00000482741 NBPF26B4DH59 902 aa9.57□□□□□ -0.88
TVP23B-203ENST00000482741 BIRC2Q13490 618 aa9.57□□□□□ -0.88
TVP23B-203ENST00000482741 NBPF14Q5TI25 921 aa9.57□□□□□ -0.88
TVP23B-203ENST00000482741 NBPF10Q6P3W6 841 aaKnown RBP9.57□□□□□ -0.88
TVP23B-203ENST00000482741 NBPF15Q8N660 670 aa9.57□□□□□ -0.88
TVP23B-203ENST00000482741 PCDH12Q9NPG4 1184 aa9.57□□□□□ -0.88
TVP23B-203ENST00000482741 DDX19BQ9UMR2 479 aa9.57□□□□□ -0.88
TVP23B-203ENST00000482741 LINS1Q8NG48 757 aa9.57□□□□□ -0.88
TVP23B-203ENST00000482741 IRF2BPLQ9H1B7 796 aa9.57□□□□□ -0.88
TVP23B-203ENST00000482741 NARFQ9UHQ1 456 aa9.57□□□□□ -0.88
TVP23B-203ENST00000482741 MICALL2Q8IY33 904 aa9.56□□□□□ -0.88
TVP23B-203ENST00000482741 FAM200AQ8TCP9 573 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 92.3 ms