RNA–Protein interactions for RNA: ENST00000482590.1

CLK1-212, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 626 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-212ENST00000482590 ZNF777Q9ULD5 760 aaPredicted RBP9.94□□□□□ -0.82
CLK1-212ENST00000482590 RTCBQ9Y3I0 505 aaKnown RBP9.94□□□□□ -0.82
CLK1-212ENST00000482590 CCNB3Q8WWL7 1395 aa9.93□□□□□ -0.82
CLK1-212ENST00000482590 HYAL3O43820 417 aaPredicted RBP9.93□□□□□ -0.82
CLK1-212ENST00000482590 IGSF3O75054 1194 aa9.93□□□□□ -0.82
CLK1-212ENST00000482590 EGFRP00533 1210 aa9.93□□□□□ -0.82
CLK1-212ENST00000482590 NRLP54845 237 aa9.93□□□□□ -0.82
CLK1-212ENST00000482590 IGF2-ASQ6U949 168 aa9.93□□□□□ -0.82
CLK1-212ENST00000482590 TLR7Q9NYK1 1049 aaKnown RBP9.93□□□□□ -0.82
CLK1-212ENST00000482590 MEGF10Q96KG7 1140 aa9.92□□□□□ -0.82
CLK1-212ENST00000482590 POLR1AO95602 1720 aaPredicted RBP9.92□□□□□ -0.82
CLK1-212ENST00000482590 A2MP01023 1474 aa9.91□□□□□ -0.82
CLK1-212ENST00000482590 KIAA1107Q9UPP5 1409 aa9.91□□□□□ -0.82
CLK1-212ENST00000482590 SPAG9O60271 1321 aaKnown RBP9.91□□□□□ -0.82
CLK1-212ENST00000482590 XYLBO75191 536 aa9.91□□□□□ -0.82
CLK1-212ENST00000482590 HMGB1P09429 215 aaKnown RBP9.91□□□□□ -0.82
CLK1-212ENST00000482590 EIF2AK2P19525 551 aaKnown RBP9.91□□□□□ -0.82
CLK1-212ENST00000482590 CFAP70Q5T0N1 1121 aa9.91□□□□□ -0.82
CLK1-212ENST00000482590 FAM200AQ8TCP9 573 aa9.91□□□□□ -0.82
CLK1-212ENST00000482590 CAMSAP1Q5T5Y3 1602 aa9.91□□□□□ -0.82
CLK1-212ENST00000482590 CEP170BQ9Y4F5 1589 aaPredicted RBP9.9□□□□□ -0.82
CLK1-212ENST00000482590 DLL1O00548 723 aa9.9□□□□□ -0.82
CLK1-212ENST00000482590 ARID4AP29374 1257 aaPredicted RBP9.9□□□□□ -0.82
CLK1-212ENST00000482590 TREML1Q86YW5 311 aa9.9□□□□□ -0.82
CLK1-212ENST00000482590 RGL4Q8IZJ4 473 aa9.9□□□□□ -0.82
CLK1-212ENST00000482590 CEP162Q5TB80 1403 aa9.9□□□□□ -0.83
CLK1-212ENST00000482590 J3QW42 95 aa9.89□□□□□ -0.83
CLK1-212ENST00000482590 CMTR1Q8N1G2 835 aaKnown RBP9.89□□□□□ -0.83
CLK1-212ENST00000482590 CFDP1Q9UEE9 299 aaPredicted RBP9.89□□□□□ -0.83
CLK1-212ENST00000482590 KCNMB2Q9Y691 235 aa9.89□□□□□ -0.83
CLK1-212ENST00000482590 PTPRTO14522 1441 aa9.89□□□□□ -0.83
CLK1-212ENST00000482590 NPATQ14207 1427 aa9.89□□□□□ -0.83
CLK1-212ENST00000482590 FKBP5Q13451 457 aaPredicted RBP9.88□□□□□ -0.83
CLK1-212ENST00000482590 COX20Q5RI15 118 aa9.88□□□□□ -0.83
CLK1-212ENST00000482590 PLD4Q96BZ4 506 aa9.88□□□□□ -0.83
CLK1-212ENST00000482590 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.88□□□□□ -0.833e-7■■■■■ 35.5
CLK1-212ENST00000482590 NCOA1Q15788 1441 aa9.88□□□□□ -0.83
CLK1-212ENST00000482590 CAMSAP2Q08AD1 1489 aa9.87□□□□□ -0.83
CLK1-212ENST00000482590 CCDC141Q6ZP82 1450 aa9.87□□□□□ -0.83
CLK1-212ENST00000482590 LOC102724428A0A0B4J2F2 783 aa9.87□□□□□ -0.83
CLK1-212ENST00000482590 MMP20O60882 483 aa9.87□□□□□ -0.83
CLK1-212ENST00000482590 HNRNPMP52272 730 aaKnown RBP eCLIP9.87□□□□□ -0.831e-7■■■■□ 21.9
CLK1-212ENST00000482590 SIK1P57059 783 aa9.87□□□□□ -0.83
CLK1-212ENST00000482590 CDCA8Q53HL2 280 aa9.87□□□□□ -0.83
CLK1-212ENST00000482590 RGS22Q8NE09 1264 aa9.87□□□□□ -0.83
CLK1-212ENST00000482590 FAM135AQ9P2D6 1515 aa9.87□□□□□ -0.83
CLK1-212ENST00000482590 ZC3H13Q5T200 1668 aaKnown RBP9.87□□□□□ -0.83
CLK1-212ENST00000482590 PSAPP07602 524 aa9.86□□□□□ -0.83
CLK1-212ENST00000482590 PRR23CQ6ZRP0 262 aa9.86□□□□□ -0.83
CLK1-212ENST00000482590 NSUN5Q96P11 429 aaKnown RBP9.86□□□□□ -0.83
CLK1-212ENST00000482590 TRAIPQ9BWF2 469 aa9.86□□□□□ -0.83
CLK1-212ENST00000482590 RNF112Q9ULX5 631 aa9.86□□□□□ -0.83
CLK1-212ENST00000482590 LTBP4Q8N2S1 1624 aa9.85□□□□□ -0.83
CLK1-212ENST00000482590 NCOA2Q15596 1464 aa9.85□□□□□ -0.83
CLK1-212ENST00000482590 IQSEC2Q5JU85 1478 aa9.85□□□□□ -0.83
CLK1-212ENST00000482590 ARHGEF5Q12774 1597 aa9.85□□□□□ -0.83
CLK1-212ENST00000482590 HOXD8P13378 290 aaPredicted RBP9.85□□□□□ -0.83
CLK1-212ENST00000482590 GDF6Q6KF10 455 aaPredicted RBP9.85□□□□□ -0.83
CLK1-212ENST00000482590 DZIP1LQ8IYY4 767 aaKnown RBP9.85□□□□□ -0.83
CLK1-212ENST00000482590 PRIMPOLQ96LW4 560 aa9.85□□□□□ -0.83
CLK1-212ENST00000482590 AKTIPQ9H8T0 292 aa9.85□□□□□ -0.83
CLK1-212ENST00000482590 KDM5DQ9BY66 1539 aa9.85□□□□□ -0.83
CLK1-212ENST00000482590 ZMYM3Q14202 1370 aa9.85□□□□□ -0.83
CLK1-212ENST00000482590 PLA2R1Q13018 1463 aa9.85□□□□□ -0.83
CLK1-212ENST00000482590 SPATA31D1Q6ZQQ2 1576 aa9.84□□□□□ -0.83
CLK1-212ENST00000482590 ALX3O95076 343 aa9.84□□□□□ -0.83
CLK1-212ENST00000482590 RFX1P22670 979 aa9.84□□□□□ -0.83
CLK1-212ENST00000482590 SOX18P35713 384 aa9.84□□□□□ -0.83
CLK1-212ENST00000482590 ETFBKMTQ8IXQ9 262 aa9.84□□□□□ -0.83
CLK1-212ENST00000482590 IL22RA1Q8N6P7 574 aa9.84□□□□□ -0.83
CLK1-212ENST00000482590 NOVA2Q9UNW9 492 aaKnown RBP9.84□□□□□ -0.83
CLK1-212ENST00000482590 DNMT1P26358 1616 aaKnown RBP9.84□□□□□ -0.83
CLK1-212ENST00000482590 MBD5Q9P267 1494 aa9.84□□□□□ -0.83
CLK1-212ENST00000482590 RTEL1-TNFRSF6BF6WH68 1400 aa9.83□□□□□ -0.84
CLK1-212ENST00000482590 EIF2AK4Q9P2K8 1649 aaKnown RBP9.83□□□□□ -0.84
CLK1-212ENST00000482590 CEP152O94986 1710 aa9.83□□□□□ -0.84
CLK1-212ENST00000482590 GHRHP01286 108 aa9.83□□□□□ -0.84
CLK1-212ENST00000482590 GGT6Q6P531 493 aa9.83□□□□□ -0.84
CLK1-212ENST00000482590 TMEM130Q8N3G9 435 aa9.83□□□□□ -0.84
CLK1-212ENST00000482590 SAP130Q9H0E3 1048 aa9.83□□□□□ -0.84
CLK1-212ENST00000482590 CROCC2H7BZ55 1655 aa9.83□□□□□ -0.84
CLK1-212ENST00000482590 PTPRKQ15262 1439 aa9.82□□□□□ -0.84
CLK1-212ENST00000482590 CFAP65Q6ZU64 1925 aaKnown RBP9.82□□□□□ -0.84
CLK1-212ENST00000482590 F8W735 103 aaPredicted RBP9.82□□□□□ -0.84
CLK1-212ENST00000482590 TRIP4Q15650 581 aaPredicted RBP9.82□□□□□ -0.84
CLK1-212ENST00000482590 MRPL18Q9H0U6 180 aaKnown RBP9.82□□□□□ -0.84
CLK1-212ENST00000482590 RNF17Q9BXT8 1623 aaKnown RBP9.82□□□□□ -0.84
CLK1-212ENST00000482590 MAST1Q9Y2H9 1570 aa9.81□□□□□ -0.84
CLK1-212ENST00000482590 A2ML1A8K2U0 1454 aa9.81□□□□□ -0.84
CLK1-212ENST00000482590 HSP90B1P14625 803 aaKnown RBP9.81□□□□□ -0.84
CLK1-212ENST00000482590 SETDB1Q15047 1291 aa9.81□□□□□ -0.84
CLK1-212ENST00000482590 OCLNQ16625 522 aa9.81□□□□□ -0.84
CLK1-212ENST00000482590 FAM26DQ5JW98 314 aa9.81□□□□□ -0.84
CLK1-212ENST00000482590 TRIM33Q9UPN9 1127 aa9.81□□□□□ -0.84
CLK1-212ENST00000482590 ZNF644Q9H582 1327 aaPredicted RBP9.81□□□□□ -0.84
CLK1-212ENST00000482590 TCOF1Q13428 1488 aaKnown RBP9.8□□□□□ -0.84
CLK1-212ENST00000482590 PRMT3O60678 531 aa9.8□□□□□ -0.84
CLK1-212ENST00000482590 CDK11BP21127 795 aaKnown RBP9.8□□□□□ -0.84
CLK1-212ENST00000482590 SWI5Q1ZZU3 235 aa9.8□□□□□ -0.84
CLK1-212ENST00000482590 NLRP13Q86W25 1043 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms