RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 ADD1P35611 737 aaKnown RBP14.69□□□□□ -0.06
VPS52-218ENST00000482399 GYS2P54840 703 aa14.69□□□□□ -0.06
VPS52-218ENST00000482399 EVCP57679 992 aa14.69□□□□□ -0.06
VPS52-218ENST00000482399 NAA16Q6N069 864 aaPredicted RBP14.69□□□□□ -0.06
VPS52-218ENST00000482399 PI16Q6UXB8 463 aa14.69□□□□□ -0.06
VPS52-218ENST00000482399 KCNG4Q8TDN1 519 aa14.69□□□□□ -0.06
VPS52-218ENST00000482399 METTL22Q9BUU2 404 aaPredicted RBP14.69□□□□□ -0.06
VPS52-218ENST00000482399 USP31Q70CQ4 1352 aa14.69□□□□□ -0.06
VPS52-218ENST00000482399 ADKP55263 362 aaKnown RBP14.68□□□□□ -0.06
VPS52-218ENST00000482399 PUF60Q9UHX1 559 aaKnown RBP14.68□□□□□ -0.06
VPS52-218ENST00000482399 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.68□□□□□ -0.065e-7■■■■□ 20.9
VPS52-218ENST00000482399 DLC1Q96QB1 1528 aa14.68□□□□□ -0.06
VPS52-218ENST00000482399 A0A1B0GUL7 405 aa14.68□□□□□ -0.06
VPS52-218ENST00000482399 PFKFB1P16118 471 aa14.68□□□□□ -0.06
VPS52-218ENST00000482399 CASQ1P31415 396 aa14.68□□□□□ -0.06
VPS52-218ENST00000482399 CLCN6P51797 869 aa14.68□□□□□ -0.06
VPS52-218ENST00000482399 CTDNEP1O95476 244 aa14.68□□□□□ -0.06
VPS52-218ENST00000482399 STX17P56962 302 aa14.68□□□□□ -0.06
VPS52-218ENST00000482399 E4F1Q66K89 784 aaPredicted RBP14.68□□□□□ -0.06
VPS52-218ENST00000482399 CCDC12Q8WUD4 166 aaPredicted RBP14.68□□□□□ -0.06
VPS52-218ENST00000482399 PUS3Q9BZE2 481 aaKnown RBP14.68□□□□□ -0.06
VPS52-218ENST00000482399 PHACTR2O75167 634 aa14.67□□□□□ -0.06
VPS52-218ENST00000482399 LMAN1P49257 510 aa14.67□□□□□ -0.06
VPS52-218ENST00000482399 ARMCX5Q6P1M9 558 aa14.67□□□□□ -0.06
VPS52-218ENST00000482399 DDX17Q92841 729 aaKnown RBP14.67□□□□□ -0.06
VPS52-218ENST00000482399 MYSM1Q5VVJ2 828 aa14.67□□□□□ -0.06
VPS52-218ENST00000482399 ADALQ6DHV7 355 aa14.67□□□□□ -0.06
VPS52-218ENST00000482399 PREX1Q8TCU6 1659 aa14.66□□□□□ -0.06
VPS52-218ENST00000482399 GPS2Q13227 327 aa14.66□□□□□ -0.06
VPS52-218ENST00000482399 ANO1Q5XXA6 986 aa14.66□□□□□ -0.06
VPS52-218ENST00000482399 SLC26A6Q9BXS9 759 aa14.66□□□□□ -0.06
VPS52-218ENST00000482399 FANCLQ9NW38 375 aa14.66□□□□□ -0.06
VPS52-218ENST00000482399 ANKRD26Q9UPS8 1709 aa14.66□□□□□ -0.06
VPS52-218ENST00000482399 SNRPA1P09661 255 aaKnown RBP14.66□□□□□ -0.06
VPS52-218ENST00000482399 SLFN14P0C7P3 912 aa14.66□□□□□ -0.06
VPS52-218ENST00000482399 GPTP24298 496 aa14.66□□□□□ -0.06
VPS52-218ENST00000482399 METAP2P50579 478 aaKnown RBP eCLIP14.66□□□□□ -0.06
VPS52-218ENST00000482399 JMYQ8N9B5 988 aa14.66□□□□□ -0.06
VPS52-218ENST00000482399 NRKQ7Z2Y5 1582 aa14.66□□□□□ -0.06
VPS52-218ENST00000482399 USP42Q9H9J4 1324 aaKnown RBP14.66□□□□□ -0.06
VPS52-218ENST00000482399 RNF113AO15541 343 aaKnown RBP14.66□□□□□ -0.06
VPS52-218ENST00000482399 HAUS7Q99871 368 aa14.66□□□□□ -0.06
VPS52-218ENST00000482399 LLPHQ9BRT6 129 aaKnown RBP14.66□□□□□ -0.06
VPS52-218ENST00000482399 CARMIL3Q8ND23 1372 aa14.65□□□□□ -0.06
VPS52-218ENST00000482399 TMEM232C9JQI7 657 aa14.65□□□□□ -0.06
VPS52-218ENST00000482399 ETF1P62495 437 aaKnown RBP14.65□□□□□ -0.06
VPS52-218ENST00000482399 RBM6P78332 1123 aaKnown RBP14.65□□□□□ -0.06
VPS52-218ENST00000482399 SAFBQ15424 915 aaKnown RBP eCLIP14.65□□□□□ -0.06
VPS52-218ENST00000482399 CMTR1Q8N1G2 835 aaKnown RBP14.65□□□□□ -0.06
VPS52-218ENST00000482399 LINC00301Q8NCQ3 95 aa14.65□□□□□ -0.06
VPS52-218ENST00000482399 DPF2Q92785 391 aa14.65□□□□□ -0.06
VPS52-218ENST00000482399 ZKSCAN3Q9BRR0 538 aa14.65□□□□□ -0.06
VPS52-218ENST00000482399 CALCOCO1Q9P1Z2 691 aa14.65□□□□□ -0.06
VPS52-218ENST00000482399 AXIN2Q9Y2T1 843 aa14.65□□□□□ -0.06
VPS52-218ENST00000482399 CBFA2T2O43439 604 aa14.65□□□□□ -0.06
VPS52-218ENST00000482399 A1BGP04217 495 aa14.65□□□□□ -0.06
VPS52-218ENST00000482399 RASSF8Q8NHQ8 419 aa14.65□□□□□ -0.06
VPS52-218ENST00000482399 COBLO75128 1261 aa14.64□□□□□ -0.07
VPS52-218ENST00000482399 AFMP43652 599 aa14.64□□□□□ -0.07
VPS52-218ENST00000482399 NCOA7Q8NI08 942 aa14.64□□□□□ -0.07
VPS52-218ENST00000482399 CNNM1Q9NRU3 951 aa14.64□□□□□ -0.07
VPS52-218ENST00000482399 MORC2Q9Y6X9 1032 aaPredicted RBP14.64□□□□□ -0.07
VPS52-218ENST00000482399 TSPOAP1O95153 1857 aa14.64□□□□□ -0.07
VPS52-218ENST00000482399 CDC25BP30305 580 aa14.64□□□□□ -0.07
VPS52-218ENST00000482399 MYL5Q02045 173 aa14.64□□□□□ -0.07
VPS52-218ENST00000482399 LRRFIP1Q32MZ4 808 aaKnown RBP14.64□□□□□ -0.07
VPS52-218ENST00000482399 CCDC102BQ68D86 513 aa14.64□□□□□ -0.07
VPS52-218ENST00000482399 SARM1Q6SZW1 724 aa14.64□□□□□ -0.07
VPS52-218ENST00000482399 TTLL7Q6ZT98 887 aa14.64□□□□□ -0.07
VPS52-218ENST00000482399 FMR1NBQ8N0W7 255 aaPredicted RBP14.64□□□□□ -0.07
VPS52-218ENST00000482399 OSBP2Q969R2 916 aa14.64□□□□□ -0.07
VPS52-218ENST00000482399 MTMR7Q9Y216 660 aa14.64□□□□□ -0.07
VPS52-218ENST00000482399 TBX22Q9Y458 520 aa14.64□□□□□ -0.07
VPS52-218ENST00000482399 ZNF609O15014 1411 aa14.64□□□□□ -0.07
VPS52-218ENST00000482399 MAST3O60307 1309 aa14.64□□□□□ -0.07
VPS52-218ENST00000482399 M0R2C6 588 aa14.64□□□□□ -0.07
VPS52-218ENST00000482399 ZSCAN12O43309 604 aa14.64□□□□□ -0.07
VPS52-218ENST00000482399 ADORA1P30542 326 aa14.64□□□□□ -0.07
VPS52-218ENST00000482399 METTL24Q5JXM2 366 aa14.64□□□□□ -0.07
VPS52-218ENST00000482399 TAF3Q5VWG9 929 aa14.64□□□□□ -0.07
VPS52-218ENST00000482399 B4E1Z4 1266 aa14.63□□□□□ -0.07
VPS52-218ENST00000482399 FGAP02671 866 aa14.63□□□□□ -0.07
VPS52-218ENST00000482399 NLRP12P59046 1061 aa14.63□□□□□ -0.07
VPS52-218ENST00000482399 KIF4BQ2VIQ3 1234 aa14.63□□□□□ -0.07
VPS52-218ENST00000482399 CCDC102AQ96A19 550 aa14.63□□□□□ -0.07
VPS52-218ENST00000482399 COPRSQ9NQ92 184 aa14.63□□□□□ -0.07
VPS52-218ENST00000482399 KAT6BQ8WYB5 2073 aa14.63□□□□□ -0.07
VPS52-218ENST00000482399 CCP110O43303 1012 aa14.63□□□□□ -0.07
VPS52-218ENST00000482399 IARSP41252 1262 aaKnown RBP14.63□□□□□ -0.07
VPS52-218ENST00000482399 NYAP1Q6ZVC0 841 aa14.63□□□□□ -0.07
VPS52-218ENST00000482399 GRAMD1CQ8IYS0 662 aa14.63□□□□□ -0.07
VPS52-218ENST00000482399 KCNB2Q92953 911 aa14.63□□□□□ -0.07
VPS52-218ENST00000482399 CWC25Q9NXE8 425 aaPredicted RBP14.63□□□□□ -0.07
VPS52-218ENST00000482399 MED23Q9ULK4 1368 aa14.63□□□□□ -0.07
VPS52-218ENST00000482399 GOLGA8AA7E2F4 631 aa14.63□□□□□ -0.07
VPS52-218ENST00000482399 PNMA6AP0CW24 399 aaPredicted RBP14.63□□□□□ -0.07
VPS52-218ENST00000482399 VPS37DQ86XT2 251 aa14.63□□□□□ -0.07
VPS52-218ENST00000482399 FBXO18Q8NFZ0 1043 aa14.63□□□□□ -0.07
VPS52-218ENST00000482399 HELBQ8NG08 1087 aaPredicted RBP14.63□□□□□ -0.07
VPS52-218ENST00000482399 IL17RAQ96F46 866 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms