RNA–Protein interactions for RNA: ENST00000482152.1

CCDC78-212, Transcript of coiled-coil domain containing 78, humanhuman

TSL 5

Gene CCDC78, Length 899 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-212ENST00000482152 PSME4Q14997 1843 aa20.18■□□□□ 0.82
CCDC78-212ENST00000482152 APLP1P51693 650 aa20.18■□□□□ 0.82
CCDC78-212ENST00000482152 OS9Q13438 667 aaPredicted RBP20.18■□□□□ 0.82
CCDC78-212ENST00000482152 ERC1Q8IUD2 1116 aa20.18■□□□□ 0.82
CCDC78-212ENST00000482152 CNTROBQ8N137 903 aa20.18■□□□□ 0.82
CCDC78-212ENST00000482152 SEMA3EO15041 775 aa20.17■□□□□ 0.82
CCDC78-212ENST00000482152 HIRAP54198 1017 aaPredicted RBP20.17■□□□□ 0.82
CCDC78-212ENST00000482152 KIF4BQ2VIQ3 1234 aa20.17■□□□□ 0.82
CCDC78-212ENST00000482152 SAMD7Q7Z3H4 446 aa20.17■□□□□ 0.82
CCDC78-212ENST00000482152 MYOZ2Q9NPC6 264 aa20.17■□□□□ 0.82
CCDC78-212ENST00000482152 ADAMTSL1Q8N6G6 1762 aa20.16■□□□□ 0.82
CCDC78-212ENST00000482152 A0A1B0GUL7 405 aa20.16■□□□□ 0.82
CCDC78-212ENST00000482152 ITGBL1O95965 494 aaPredicted RBP20.16■□□□□ 0.82
CCDC78-212ENST00000482152 TIMM10P62072 90 aa20.16■□□□□ 0.82
CCDC78-212ENST00000482152 TBC1D10BQ4KMP7 808 aaPredicted RBP20.16■□□□□ 0.82
CCDC78-212ENST00000482152 TRPM4Q8TD43 1214 aa20.16■□□□□ 0.82
CCDC78-212ENST00000482152 SUGT1Q9Y2Z0 365 aa20.16■□□□□ 0.82
CCDC78-212ENST00000482152 SHTN1A0MZ66 631 aa20.15■□□□□ 0.82
CCDC78-212ENST00000482152 AAMPQ13685 434 aa20.15■□□□□ 0.82
CCDC78-212ENST00000482152 MFSD14BQ5SR56 506 aa20.15■□□□□ 0.82
CCDC78-212ENST00000482152 MAP1SQ66K74 1059 aaPredicted RBP20.15■□□□□ 0.82
CCDC78-212ENST00000482152 CDC37L1Q7L3B6 337 aa20.15■□□□□ 0.82
CCDC78-212ENST00000482152 WDR66Q8TBY9 1149 aa20.15■□□□□ 0.82
CCDC78-212ENST00000482152 MXD3Q9BW11 206 aa20.15■□□□□ 0.82
CCDC78-212ENST00000482152 RBM26Q5T8P6 1007 aaKnown RBP20.14■□□□□ 0.81
CCDC78-212ENST00000482152 KIAA0825Q8IV33 1275 aa20.14■□□□□ 0.81
CCDC78-212ENST00000482152 CERS5Q8N5B7 392 aa20.14■□□□□ 0.81
CCDC78-212ENST00000482152 MTMR14Q8NCE2 650 aa20.14■□□□□ 0.81
CCDC78-212ENST00000482152 DCPSQ96C86 337 aaKnown RBP20.14■□□□□ 0.81
CCDC78-212ENST00000482152 XAGE2Q96GT9 111 aa20.14■□□□□ 0.81
CCDC78-212ENST00000482152 NEUROD6Q96NK8 337 aa20.14■□□□□ 0.81
CCDC78-212ENST00000482152 DENND2AQ9ULE3 1009 aa20.14■□□□□ 0.81
CCDC78-212ENST00000482152 PASKQ96RG2 1323 aa20.13■□□□□ 0.81
CCDC78-212ENST00000482152 CCDC102BQ68D86 513 aa20.13■□□□□ 0.81
CCDC78-212ENST00000482152 MRIQ9BWK5 157 aa20.13■□□□□ 0.81
CCDC78-212ENST00000482152 PDS5AQ29RF7 1337 aaKnown RBP20.12■□□□□ 0.81
CCDC78-212ENST00000482152 PITPNM2Q9BZ72 1349 aa20.12■□□□□ 0.81
CCDC78-212ENST00000482152 RAB11FIP3O75154 756 aa20.12■□□□□ 0.81
CCDC78-212ENST00000482152 HDLBPQ00341 1268 aaKnown RBP20.12■□□□□ 0.81
CCDC78-212ENST00000482152 SCARF1Q14162 830 aa20.12■□□□□ 0.81
CCDC78-212ENST00000482152 GORABQ5T7V8 394 aa20.12■□□□□ 0.81
CCDC78-212ENST00000482152 SIRT2Q8IXJ6 389 aa20.12■□□□□ 0.81
CCDC78-212ENST00000482152 EGFRP00533 1210 aa20.11■□□□□ 0.81
CCDC78-212ENST00000482152 CHAF1AQ13111 956 aaPredicted RBP20.11■□□□□ 0.81
CCDC78-212ENST00000482152 DLGAP5Q15398 846 aa20.11■□□□□ 0.81
CCDC78-212ENST00000482152 TNNI3KQ59H18 835 aa20.11■□□□□ 0.81
CCDC78-212ENST00000482152 SERPINA10Q9UK55 444 aa20.11■□□□□ 0.81
CCDC78-212ENST00000482152 IQSEC3Q9UPP2 1182 aaPredicted RBP20.11■□□□□ 0.81
CCDC78-212ENST00000482152 FPGT-TNNI3KV9GXZ4 949 aa20.11■□□□□ 0.81
CCDC78-212ENST00000482152 MAST3O60307 1309 aa20.1■□□□□ 0.81
CCDC78-212ENST00000482152 PHKA1P46020 1223 aa20.1■□□□□ 0.81
CCDC78-212ENST00000482152 ZGPATQ8N5A5 531 aaKnown RBP20.1■□□□□ 0.81
CCDC78-212ENST00000482152 SALL1Q9NSC2 1324 aa20.09■□□□□ 0.81
CCDC78-212ENST00000482152 WNT10BO00744 389 aa20.09■□□□□ 0.81
CCDC78-212ENST00000482152 UQCRFS1P1P0C7P4 283 aa20.09■□□□□ 0.81
CCDC78-212ENST00000482152 ADORA1P30542 326 aa20.09■□□□□ 0.81
CCDC78-212ENST00000482152 CCDC158Q5M9N0 1113 aa20.09■□□□□ 0.81
CCDC78-212ENST00000482152 SULF1Q8IWU6 871 aa20.09■□□□□ 0.81
CCDC78-212ENST00000482152 KIF1BPQ96EK5 621 aa20.09■□□□□ 0.81
CCDC78-212ENST00000482152 ZBED3Q96IU2 234 aaPredicted RBP20.09■□□□□ 0.81
CCDC78-212ENST00000482152 CREBZFQ9NS37 354 aa20.09■□□□□ 0.81
CCDC78-212ENST00000482152 TTF2Q9UNY4 1162 aaKnown RBP20.09■□□□□ 0.81
CCDC78-212ENST00000482152 EXOC6BQ9Y2D4 811 aa20.09■□□□□ 0.81
CCDC78-212ENST00000482152 TMEM88BA6NKF7 163 aa20.08■□□□□ 0.81
CCDC78-212ENST00000482152 MYO1BO43795 1136 aa20.08■□□□□ 0.81
CCDC78-212ENST00000482152 KRT26Q7Z3Y9 468 aa20.08■□□□□ 0.81
CCDC78-212ENST00000482152 JAG2Q9Y219 1238 aa20.08■□□□□ 0.81
CCDC78-212ENST00000482152 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.08■□□□□ 0.81
CCDC78-212ENST00000482152 ZNF646O15015 1829 aaPredicted RBP20.08■□□□□ 0.8
CCDC78-212ENST00000482152 F8W031 263 aaPredicted RBP20.07■□□□□ 0.8
CCDC78-212ENST00000482152 RHPN1Q8TCX5 695 aa20.07■□□□□ 0.8
CCDC78-212ENST00000482152 ZNF512BQ96KM6 892 aaPredicted RBP20.07■□□□□ 0.8
CCDC78-212ENST00000482152 GGA3Q9NZ52 723 aa20.07■□□□□ 0.8
CCDC78-212ENST00000482152 IGSF3O75054 1194 aa20.06■□□□□ 0.8
CCDC78-212ENST00000482152 ARID4AP29374 1257 aaPredicted RBP20.06■□□□□ 0.8
CCDC78-212ENST00000482152 NBPF9Q3BBW0 867 aa20.06■□□□□ 0.8
CCDC78-212ENST00000482152 CFAP100Q494V2 611 aa20.06■□□□□ 0.8
CCDC78-212ENST00000482152 ANGEL2Q5VTE6 544 aaKnown RBP20.06■□□□□ 0.8
CCDC78-212ENST00000482152 SPTY2D1Q68D10 685 aaPredicted RBP20.06■□□□□ 0.8
CCDC78-212ENST00000482152 USP48Q86UV5 1035 aa20.06■□□□□ 0.8
CCDC78-212ENST00000482152 CLASRPQ8N2M8 674 aaKnown RBP20.06■□□□□ 0.8
CCDC78-212ENST00000482152 SPDYE2BA6NHP3 402 aa20.05■□□□□ 0.8
CCDC78-212ENST00000482152 SPDYE6P0CI01 402 aa20.05■□□□□ 0.8
CCDC78-212ENST00000482152 RBM5P52756 815 aaKnown RBP eCLIP20.05■□□□□ 0.8
CCDC78-212ENST00000482152 RASGRF1Q13972 1273 aa20.05■□□□□ 0.8
CCDC78-212ENST00000482152 APOBEC3FQ8IUX4 373 aaKnown RBP20.05■□□□□ 0.8
CCDC78-212ENST00000482152 TEKT1Q969V4 418 aa20.05■□□□□ 0.8
CCDC78-212ENST00000482152 CRBNQ96SW2 442 aa20.05■□□□□ 0.8
CCDC78-212ENST00000482152 GLIS2Q9BZE0 524 aaPredicted RBP20.05■□□□□ 0.8
CCDC78-212ENST00000482152 ARAP2Q8WZ64 1704 aa20.05■□□□□ 0.8
CCDC78-212ENST00000482152 LDHBP07195 334 aaKnown RBP20.04■□□□□ 0.8
CCDC78-212ENST00000482152 CRKP46108 304 aa20.04■□□□□ 0.8
CCDC78-212ENST00000482152 TTC39AQ5SRH9 613 aa20.04■□□□□ 0.8
CCDC78-212ENST00000482152 HHIPL2Q6UWX4 724 aa20.04■□□□□ 0.8
CCDC78-212ENST00000482152 SPATA5Q8NB90 893 aa20.04■□□□□ 0.8
CCDC78-212ENST00000482152 EAF2Q96CJ1 260 aaPredicted RBP20.04■□□□□ 0.8
CCDC78-212ENST00000482152 SUPT16HQ9Y5B9 1047 aaKnown RBP20.04■□□□□ 0.8
CCDC78-212ENST00000482152 SLF2Q8IX21 1173 aa20.03■□□□□ 0.8
CCDC78-212ENST00000482152 PRMT6Q96LA8 375 aaPredicted RBP20.03■□□□□ 0.8
CCDC78-212ENST00000482152 ZDHHC15Q96MV8 337 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms