RNA–Protein interactions for RNA: ENST00000481786.1

USH2A-204, Transcript of usherin, humanhuman

TSL 2

Gene USH2A, Length 626 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-204ENST00000481786 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.44□□□□□ -1.7
USH2A-204ENST00000481786 FAM95CA0A1B0GW59 222 aa4.44□□□□□ -1.7
USH2A-204ENST00000481786 FARP2O94887 1054 aaPredicted RBP4.44□□□□□ -1.7
USH2A-204ENST00000481786 DLGAP3O95886 979 aa4.44□□□□□ -1.7
USH2A-204ENST00000481786 ACPPP15309 386 aa4.44□□□□□ -1.7
USH2A-204ENST00000481786 ZNF792Q3KQV3 632 aa4.44□□□□□ -1.7
USH2A-204ENST00000481786 FAM117BQ6P1L5 589 aa4.44□□□□□ -1.7
USH2A-204ENST00000481786 SPRED2Q7Z698 418 aa4.44□□□□□ -1.7
USH2A-204ENST00000481786 GIMAP7Q8NHV1 300 aa4.44□□□□□ -1.7
USH2A-204ENST00000481786 FAM200AQ8TCP9 573 aa4.44□□□□□ -1.7
USH2A-204ENST00000481786 SLC7A3Q8WY07 619 aa4.44□□□□□ -1.7
USH2A-204ENST00000481786 CCDC97Q96F63 343 aaPredicted RBP4.44□□□□□ -1.7
USH2A-204ENST00000481786 TBC1D32Q96NH3 1257 aa4.44□□□□□ -1.7
USH2A-204ENST00000481786 PBX4Q9BYU1 374 aa4.44□□□□□ -1.7
USH2A-204ENST00000481786 LRRC4CQ9HCJ2 640 aa4.44□□□□□ -1.7
USH2A-204ENST00000481786 SERPINA10Q9UK55 444 aa4.44□□□□□ -1.7
USH2A-204ENST00000481786 EIF4G1Q04637 1599 aaKnown RBP4.44□□□□□ -1.7
USH2A-204ENST00000481786 NCANO14594 1321 aa4.44□□□□□ -1.7
USH2A-204ENST00000481786 TRPA1O75762 1119 aa4.43□□□□□ -1.7
USH2A-204ENST00000481786 HYAL2Q12891 473 aa4.43□□□□□ -1.7
USH2A-204ENST00000481786 ELOAQ14241 798 aaKnown RBP4.43□□□□□ -1.7
USH2A-204ENST00000481786 COX20Q5RI15 118 aa4.43□□□□□ -1.7
USH2A-204ENST00000481786 LILRA6Q6PI73 481 aa4.43□□□□□ -1.7
USH2A-204ENST00000481786 C12orf50Q8NA57 414 aaPredicted RBP4.43□□□□□ -1.7
USH2A-204ENST00000481786 AGBL5Q8NDL9 886 aa4.43□□□□□ -1.7
USH2A-204ENST00000481786 PRKAG2Q9UGJ0 569 aa4.43□□□□□ -1.7
USH2A-204ENST00000481786 ZMIZ1Q9ULJ6 1067 aa4.43□□□□□ -1.7
USH2A-204ENST00000481786 NOVA2Q9UNW9 492 aaKnown RBP4.43□□□□□ -1.7
USH2A-204ENST00000481786 UBAP1LF5GYI3 381 aa4.42□□□□□ -1.7
USH2A-204ENST00000481786 H3BRJ5 948 aa4.42□□□□□ -1.7
USH2A-204ENST00000481786 PRRG2O14669 202 aa4.42□□□□□ -1.7
USH2A-204ENST00000481786 ATG7O95352 703 aa4.42□□□□□ -1.7
USH2A-204ENST00000481786 TIAF1O95411 115 aa4.42□□□□□ -1.7
USH2A-204ENST00000481786 WEE1P30291 646 aa4.42□□□□□ -1.7
USH2A-204ENST00000481786 SCNN1AP37088 669 aa4.42□□□□□ -1.7
USH2A-204ENST00000481786 BNIP3Q12983 259 aa4.42□□□□□ -1.7
USH2A-204ENST00000481786 PLCL1Q15111 1095 aa4.42□□□□□ -1.7
USH2A-204ENST00000481786 ZAR1Q86SH2 424 aa4.42□□□□□ -1.7
USH2A-204ENST00000481786 KSR1Q8IVT5 923 aa4.42□□□□□ -1.7
USH2A-204ENST00000481786 CEP120Q8N960 986 aa4.42□□□□□ -1.7
USH2A-204ENST00000481786 BCL7CQ8WUZ0 217 aaPredicted RBP4.42□□□□□ -1.7
USH2A-204ENST00000481786 FAM168AQ92567 244 aa4.42□□□□□ -1.7
USH2A-204ENST00000481786 PBXIP1Q96AQ6 731 aa4.42□□□□□ -1.7
USH2A-204ENST00000481786 SPACA7Q96KW9 195 aa4.42□□□□□ -1.7
USH2A-204ENST00000481786 HHIPQ96QV1 700 aa4.42□□□□□ -1.7
USH2A-204ENST00000481786 ADAM19Q9H013 955 aa4.42□□□□□ -1.7
USH2A-204ENST00000481786 UNC13AQ9UPW8 1703 aa4.42□□□□□ -1.7
USH2A-204ENST00000481786 MEGF11A6BM72 1044 aa4.41□□□□□ -1.7
USH2A-204ENST00000481786 KIF4AO95239 1232 aa4.41□□□□□ -1.7
USH2A-204ENST00000481786 PTPRAP18433 802 aa4.41□□□□□ -1.7
USH2A-204ENST00000481786 CFPP27918 469 aa4.41□□□□□ -1.7
USH2A-204ENST00000481786 FAM69CQ0P6D2 419 aa4.41□□□□□ -1.7
USH2A-204ENST00000481786 MESP2Q0VG99 397 aa4.41□□□□□ -1.7
USH2A-204ENST00000481786 PKN1Q16512 942 aa4.41□□□□□ -1.7
USH2A-204ENST00000481786 NUTM2GQ5VZR2 741 aa4.41□□□□□ -1.7
USH2A-204ENST00000481786 LCNL1Q6ZST4 164 aa4.41□□□□□ -1.7
USH2A-204ENST00000481786 CCDC82Q8N4S0 544 aa4.41□□□□□ -1.7
USH2A-204ENST00000481786 STK32AQ8WU08 396 aa4.41□□□□□ -1.7
USH2A-204ENST00000481786 SAP130Q9H0E3 1048 aa4.41□□□□□ -1.7
USH2A-204ENST00000481786 ACIN1Q9UKV3 1341 aaKnown RBP4.41□□□□□ -1.7
USH2A-204ENST00000481786 B8ZZF3 427 aa4.4□□□□□ -1.71
USH2A-204ENST00000481786 PIP4K2BP78356 416 aa4.4□□□□□ -1.71
USH2A-204ENST00000481786 CPSF6Q16630 551 aaKnown RBP eCLIP4.4□□□□□ -1.71
USH2A-204ENST00000481786 PAOXQ6QHF9 649 aa4.4□□□□□ -1.71
USH2A-204ENST00000481786 ZNF765Q7L2R6 523 aa4.4□□□□□ -1.71
USH2A-204ENST00000481786 C1QL4Q86Z23 238 aa4.4□□□□□ -1.71
USH2A-204ENST00000481786 GLIS3Q8NEA6 775 aa4.4□□□□□ -1.71
USH2A-204ENST00000481786 VTI1AQ96AJ9 217 aa4.4□□□□□ -1.71
USH2A-204ENST00000481786 METTL22Q9BUU2 404 aaPredicted RBP4.4□□□□□ -1.71
USH2A-204ENST00000481786 TMPRSS13Q9BYE2 586 aa4.4□□□□□ -1.71
USH2A-204ENST00000481786 OSGEPQ9NPF4 335 aa4.4□□□□□ -1.71
USH2A-204ENST00000481786 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP4.4□□□□□ -1.71
USH2A-204ENST00000481786 KANSL3Q9P2N6 904 aa4.4□□□□□ -1.71
USH2A-204ENST00000481786 ADAMTS6Q9UKP5 1117 aa4.4□□□□□ -1.71
USH2A-204ENST00000481786 ERCC6Q03468 1493 aa4.4□□□□□ -1.71
USH2A-204ENST00000481786 NFKBIEO00221 500 aa4.39□□□□□ -1.71
USH2A-204ENST00000481786 SOX1O00570 391 aaPredicted RBP4.39□□□□□ -1.71
USH2A-204ENST00000481786 FOXO3O43524 673 aa4.39□□□□□ -1.71
USH2A-204ENST00000481786 CD96P40200 585 aa4.39□□□□□ -1.71
USH2A-204ENST00000481786 USP11P51784 963 aa4.39□□□□□ -1.71
USH2A-204ENST00000481786 SWI5Q1ZZU3 235 aa4.39□□□□□ -1.71
USH2A-204ENST00000481786 TMEM164Q5U3C3 297 aa4.39□□□□□ -1.71
USH2A-204ENST00000481786 ERICH6Q7L0X2 663 aa4.39□□□□□ -1.71
USH2A-204ENST00000481786 NCAPG2Q86XI2 1143 aa4.39□□□□□ -1.71
USH2A-204ENST00000481786 C2CD4AQ8NCU7 369 aaPredicted RBP4.39□□□□□ -1.71
USH2A-204ENST00000481786 SMG8Q8ND04 991 aaKnown RBP4.39□□□□□ -1.71
USH2A-204ENST00000481786 PRIMPOLQ96LW4 560 aa4.39□□□□□ -1.71
USH2A-204ENST00000481786 USP26Q9BXU7 913 aa4.39□□□□□ -1.71
USH2A-204ENST00000481786 MYO15BQ96JP2 1530 aa4.38□□□□□ -1.71
USH2A-204ENST00000481786 LOC100289279A0A1B0GTE1 492 aa4.38□□□□□ -1.71
USH2A-204ENST00000481786 RNASE1P07998 156 aaKnown RBP4.38□□□□□ -1.71
USH2A-204ENST00000481786 FKBP5Q13451 457 aaPredicted RBP4.38□□□□□ -1.71
USH2A-204ENST00000481786 OCLNQ16625 522 aa4.38□□□□□ -1.71
USH2A-204ENST00000481786 TTC39BQ5VTQ0 682 aaPredicted RBP4.38□□□□□ -1.71
USH2A-204ENST00000481786 RC3H2Q9HBD1 1191 aaKnown RBP4.38□□□□□ -1.71
USH2A-204ENST00000481786 MBNL3Q9NUK0 354 aaKnown RBP4.38□□□□□ -1.71
USH2A-204ENST00000481786 SLC5A6Q9Y289 635 aa4.38□□□□□ -1.71
USH2A-204ENST00000481786 BIN1O00499 593 aa4.37□□□□□ -1.71
USH2A-204ENST00000481786 PRMT3O60678 531 aa4.37□□□□□ -1.71
USH2A-204ENST00000481786 NFICP08651 508 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 180.8 ms