RNA–Protein interactions for RNA: ENST00000481456.1

DDX39B-219, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 5,158 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-219ENST00000481456 EFCAB8A8MWE9 144 aa13.16□□□□□ -0.3
DDX39B-219ENST00000481456 LARGE1O95461 756 aa13.16□□□□□ -0.3
DDX39B-219ENST00000481456 TAF4BQ92750 862 aa13.16□□□□□ -0.3
DDX39B-219ENST00000481456 SYTL4Q96C24 671 aaPredicted RBP13.16□□□□□ -0.3
DDX39B-219ENST00000481456 ALS2CR12Q96Q35 445 aa13.16□□□□□ -0.3
DDX39B-219ENST00000481456 PRM3Q9NNZ6 103 aa13.15□□□□□ -0.3
DDX39B-219ENST00000481456 LRP2BPQ9P2M1 347 aa13.15□□□□□ -0.3
DDX39B-219ENST00000481456 BMP15O95972 392 aa13.15□□□□□ -0.3
DDX39B-219ENST00000481456 RHOXF2BP0C7M4 288 aa13.15□□□□□ -0.3
DDX39B-219ENST00000481456 ETF1P62495 437 aaKnown RBP13.15□□□□□ -0.3
DDX39B-219ENST00000481456 RHOXF2Q9BQY4 288 aa13.15□□□□□ -0.3
DDX39B-219ENST00000481456 KIAA1210Q9ULL0 1709 aa13.15□□□□□ -0.3
DDX39B-219ENST00000481456 KRI1Q8N9T8 703 aaKnown RBP13.15□□□□□ -0.3
DDX39B-219ENST00000481456 CTCFLQ8NI51 663 aaPredicted RBP13.15□□□□□ -0.3
DDX39B-219ENST00000481456 SUCLG2Q96I99 432 aa13.15□□□□□ -0.3
DDX39B-219ENST00000481456 JADE2Q9NQC1 790 aa13.15□□□□□ -0.3
DDX39B-219ENST00000481456 RMND1Q9NWS8 449 aa13.15□□□□□ -0.3
DDX39B-219ENST00000481456 A0A1B0GUL7 405 aa13.15□□□□□ -0.3
DDX39B-219ENST00000481456 AFMP43652 599 aa13.15□□□□□ -0.3
DDX39B-219ENST00000481456 CNGA4Q8IV77 575 aa13.15□□□□□ -0.3
DDX39B-219ENST00000481456 PPP1R13BQ96KQ4 1090 aa13.15□□□□□ -0.3
DDX39B-219ENST00000481456 USP28Q96RU2 1077 aa13.15□□□□□ -0.3
DDX39B-219ENST00000481456 PFKFB2O60825 505 aa13.14□□□□□ -0.31
DDX39B-219ENST00000481456 SMC1AQ14683 1233 aaKnown RBP13.14□□□□□ -0.31
DDX39B-219ENST00000481456 HSP90AB3PQ58FF7 597 aa13.14□□□□□ -0.31
DDX39B-219ENST00000481456 DDX21Q9NR30 783 aaKnown RBP eCLIP13.14□□□□□ -0.31
DDX39B-219ENST00000481456 ZC3H6P61129 1189 aaKnown RBP13.14□□□□□ -0.31
DDX39B-219ENST00000481456 RNF216Q9NWF9 866 aaPredicted RBP13.14□□□□□ -0.31
DDX39B-219ENST00000481456 DDX41Q9UJV9 622 aaKnown RBP13.14□□□□□ -0.31
DDX39B-219ENST00000481456 IRX3P78415 501 aaPredicted RBP13.14□□□□□ -0.31
DDX39B-219ENST00000481456 BEND3Q5T5X7 828 aa13.14□□□□□ -0.31
DDX39B-219ENST00000481456 RRAGBQ5VZM2 374 aa13.14□□□□□ -0.31
DDX39B-219ENST00000481456 MFSD6Q6ZSS7 791 aa13.14□□□□□ -0.31
DDX39B-219ENST00000481456 C11orf57Q6ZUT1 292 aaPredicted RBP13.14□□□□□ -0.31
DDX39B-219ENST00000481456 ZCCHC11Q5TAX3 1644 aaKnown RBP13.14□□□□□ -0.31
DDX39B-219ENST00000481456 RNMTO43148 476 aaKnown RBP13.13□□□□□ -0.31
DDX39B-219ENST00000481456 EIF4A1P60842 406 aaKnown RBP13.13□□□□□ -0.31
DDX39B-219ENST00000481456 GPATCH11Q8N954 259 aa13.13□□□□□ -0.31
DDX39B-219ENST00000481456 CYLC1P35663 651 aaPredicted RBP13.13□□□□□ -0.31
DDX39B-219ENST00000481456 PI4K2BQ8TCG2 481 aa13.13□□□□□ -0.31
DDX39B-219ENST00000481456 ATP8B1O43520 1251 aa13.13□□□□□ -0.31
DDX39B-219ENST00000481456 HSF2BPO75031 334 aa13.13□□□□□ -0.31
DDX39B-219ENST00000481456 PHACTR2O75167 634 aa13.13□□□□□ -0.31
DDX39B-219ENST00000481456 MNAT1P51948 309 aa13.13□□□□□ -0.31
DDX39B-219ENST00000481456 ZSCAN26Q16670 478 aa13.13□□□□□ -0.31
DDX39B-219ENST00000481456 IFNL2Q8IZJ0 200 aa13.13□□□□□ -0.31
DDX39B-219ENST00000481456 KRT23Q9C075 422 aa13.13□□□□□ -0.31
DDX39B-219ENST00000481456 GOLGA6L7A0A1B0GV03 622 aa13.13□□□□□ -0.31
DDX39B-219ENST00000481456 RNF187Q5TA31 235 aaPredicted RBP13.13□□□□□ -0.31
DDX39B-219ENST00000481456 KCNH3Q9ULD8 1083 aa13.13□□□□□ -0.31
DDX39B-219ENST00000481456 WDHD1O75717 1129 aaPredicted RBP13.12□□□□□ -0.31
DDX39B-219ENST00000481456 ATP5JP18859 108 aa13.12□□□□□ -0.31
DDX39B-219ENST00000481456 FAM114A1Q8IWE2 563 aa13.12□□□□□ -0.31
DDX39B-219ENST00000481456 KBTBD3Q8NAB2 608 aa13.12□□□□□ -0.31
DDX39B-219ENST00000481456 TTC14Q96N46 770 aa13.12□□□□□ -0.31
DDX39B-219ENST00000481456 CNNM2Q9H8M5 875 aa13.12□□□□□ -0.31
DDX39B-219ENST00000481456 TTF2Q9UNY4 1162 aaKnown RBP13.12□□□□□ -0.31
DDX39B-219ENST00000481456 ADGRB3O60242 1522 aa13.12□□□□□ -0.31
DDX39B-219ENST00000481456 MINDY4BA8MYZ0 360 aa13.12□□□□□ -0.31
DDX39B-219ENST00000481456 BRD3Q15059 726 aa13.12□□□□□ -0.31
DDX39B-219ENST00000481456 TERF2Q15554 542 aa13.12□□□□□ -0.31
DDX39B-219ENST00000481456 RTN1Q16799 776 aa13.12□□□□□ -0.31
DDX39B-219ENST00000481456 CATIPQ7Z7H3 387 aa13.12□□□□□ -0.31
DDX39B-219ENST00000481456 PLA2G4DQ86XP0 818 aa13.12□□□□□ -0.31
DDX39B-219ENST00000481456 NAA15Q9BXJ9 866 aaKnown RBP13.12□□□□□ -0.31
DDX39B-219ENST00000481456 OPA1O60313 960 aa13.12□□□□□ -0.31
DDX39B-219ENST00000481456 CUTAO60888 179 aa13.12□□□□□ -0.31
DDX39B-219ENST00000481456 SARM1Q6SZW1 724 aa13.12□□□□□ -0.31
DDX39B-219ENST00000481456 MICALL1Q8N3F8 863 aa13.12□□□□□ -0.31
DDX39B-219ENST00000481456 KLHDC4Q8TBB5 520 aa13.12□□□□□ -0.31
DDX39B-219ENST00000481456 DHX58Q96C10 678 aa13.12□□□□□ -0.31
DDX39B-219ENST00000481456 NAPGQ99747 312 aaPredicted RBP13.12□□□□□ -0.31
DDX39B-219ENST00000481456 DBNDD2Q9BQY9 259 aa13.12□□□□□ -0.31
DDX39B-219ENST00000481456 DSCC1Q9BVC3 393 aa13.12□□□□□ -0.31
DDX39B-219ENST00000481456 ZBTB3Q9H5J0 574 aa13.12□□□□□ -0.31
DDX39B-219ENST00000481456 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.12□□□□□ -0.31
DDX39B-219ENST00000481456 KDRP35968 1356 aa13.12□□□□□ -0.31
DDX39B-219ENST00000481456 KRT83P78385 493 aa13.12□□□□□ -0.31
DDX39B-219ENST00000481456 WTAPQ15007 396 aa13.12□□□□□ -0.31
DDX39B-219ENST00000481456 OTUD7BQ6GQQ9 843 aa13.12□□□□□ -0.31
DDX39B-219ENST00000481456 ANKRD18BA2A2Z9 1011 aa13.11□□□□□ -0.31
DDX39B-219ENST00000481456 MTIF2P46199 727 aaKnown RBP13.11□□□□□ -0.31
DDX39B-219ENST00000481456 RBM6P78332 1123 aaKnown RBP13.11□□□□□ -0.31
DDX39B-219ENST00000481456 SOGA3Q5TF21 947 aa13.11□□□□□ -0.31
DDX39B-219ENST00000481456 ZNF274Q96GC6 653 aaPredicted RBP13.11□□□□□ -0.31
DDX39B-219ENST00000481456 CTDP1Q9Y5B0 961 aaPredicted RBP13.11□□□□□ -0.31
DDX39B-219ENST00000481456 EBAG9O00559 213 aa13.11□□□□□ -0.31
DDX39B-219ENST00000481456 IQCA1Q86XH1 822 aa13.11□□□□□ -0.31
DDX39B-219ENST00000481456 IGSF22Q8N9C0 903 aa13.11□□□□□ -0.31
DDX39B-219ENST00000481456 MLKLQ8NB16 471 aa13.11□□□□□ -0.31
DDX39B-219ENST00000481456 EAF2Q96CJ1 260 aaPredicted RBP13.11□□□□□ -0.31
DDX39B-219ENST00000481456 SIRT1Q96EB6 747 aa13.11□□□□□ -0.31
DDX39B-219ENST00000481456 PLEKHG3A1L390 1219 aa13.11□□□□□ -0.31
DDX39B-219ENST00000481456 VGLL3A8MV65 326 aa13.11□□□□□ -0.31
DDX39B-219ENST00000481456 NLRP5P59047 1200 aa13.11□□□□□ -0.31
DDX39B-219ENST00000481456 SLC39A6Q13433 755 aa13.11□□□□□ -0.31
DDX39B-219ENST00000481456 POLA2Q14181 598 aa13.11□□□□□ -0.31
DDX39B-219ENST00000481456 FBXO38Q6PIJ6 1188 aa13.11□□□□□ -0.31
DDX39B-219ENST00000481456 CACNA2D4Q7Z3S7 1137 aa13.11□□□□□ -0.31
DDX39B-219ENST00000481456 TMTC2Q8N394 836 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms