RNA–Protein interactions for RNA: ENST00000481441.1

RXRB-203, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 1,330 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-203ENST00000481441 CD99L2Q8TCZ2 262 aa22.29■■□□□ 1.16
RXRB-203ENST00000481441 ARMC5Q96C12 935 aa22.29■■□□□ 1.16
RXRB-203ENST00000481441 PLA2G12BQ9BX93 195 aa22.29■■□□□ 1.16
RXRB-203ENST00000481441 PCDHAC2Q9Y5I4 1007 aa22.29■■□□□ 1.16
RXRB-203ENST00000481441 CRHR2Q13324 411 aa22.28■■□□□ 1.16
RXRB-203ENST00000481441 GJA5P36382 358 aa22.27■■□□□ 1.16
RXRB-203ENST00000481441 CHRNDQ07001 517 aa22.27■■□□□ 1.16
RXRB-203ENST00000481441 MPHOSPH8Q99549 860 aa22.27■■□□□ 1.16
RXRB-203ENST00000481441 A0A1B0GUL6 1792 aa22.26■■□□□ 1.15
RXRB-203ENST00000481441 OTOFQ9HC10 1997 aa22.26■■□□□ 1.15
RXRB-203ENST00000481441 CSF1RP07333 972 aa22.26■■□□□ 1.15
RXRB-203ENST00000481441 EN2P19622 333 aaPredicted RBP22.26■■□□□ 1.15
RXRB-203ENST00000481441 KCNJ4P48050 445 aa22.26■■□□□ 1.15
RXRB-203ENST00000481441 CAP1Q01518 475 aa22.26■■□□□ 1.15
RXRB-203ENST00000481441 SUPT20HL1Q3ZLR7 823 aa22.26■■□□□ 1.15
RXRB-203ENST00000481441 CLRN2A0PK11 232 aa22.25■■□□□ 1.15
RXRB-203ENST00000481441 TESPA1A2RU30 521 aaPredicted RBP22.25■■□□□ 1.15
RXRB-203ENST00000481441 SPDYE2BA6NHP3 402 aa22.25■■□□□ 1.15
RXRB-203ENST00000481441 SPDYE6P0CI01 402 aa22.25■■□□□ 1.15
RXRB-203ENST00000481441 CASP7P55210 303 aa22.25■■□□□ 1.15
RXRB-203ENST00000481441 CFAP100Q494V2 611 aa22.25■■□□□ 1.15
RXRB-203ENST00000481441 NBPF12Q5TAG4 269 aaPredicted RBP22.25■■□□□ 1.15
RXRB-203ENST00000481441 OTUD7BQ6GQQ9 843 aa22.25■■□□□ 1.15
RXRB-203ENST00000481441 C15orf52Q6ZUT6 534 aaKnown RBP22.25■■□□□ 1.15
RXRB-203ENST00000481441 PRMT6Q96LA8 375 aaPredicted RBP22.25■■□□□ 1.15
RXRB-203ENST00000481441 PTPN18Q99952 460 aa22.25■■□□□ 1.15
RXRB-203ENST00000481441 EFCC1Q9HA90 598 aa22.25■■□□□ 1.15
RXRB-203ENST00000481441 CENPFP49454 3210 aa22.24■■□□□ 1.15
RXRB-203ENST00000481441 AOX1Q06278 1338 aa22.24■■□□□ 1.15
RXRB-203ENST00000481441 SNAP23O00161 211 aa22.24■■□□□ 1.15
RXRB-203ENST00000481441 USP2O75604 605 aaPredicted RBP22.24■■□□□ 1.15
RXRB-203ENST00000481441 IREB2P48200 963 aaKnown RBP22.24■■□□□ 1.15
RXRB-203ENST00000481441 SP3Q02447 781 aa22.24■■□□□ 1.15
RXRB-203ENST00000481441 DDX10Q13206 875 aaKnown RBP22.24■■□□□ 1.15
RXRB-203ENST00000481441 GCKRQ14397 625 aa22.24■■□□□ 1.15
RXRB-203ENST00000481441 G2E3Q7L622 706 aa22.24■■□□□ 1.15
RXRB-203ENST00000481441 MYO1BO43795 1136 aa22.23■■□□□ 1.15
RXRB-203ENST00000481441 FXR1P51114 621 aaKnown RBP eCLIP22.23■■□□□ 1.15
RXRB-203ENST00000481441 STK31Q9BXU1 1019 aa22.23■■□□□ 1.15
RXRB-203ENST00000481441 F8W031 263 aaPredicted RBP22.22■■□□□ 1.15
RXRB-203ENST00000481441 IL1R1P14778 569 aa22.22■■□□□ 1.15
RXRB-203ENST00000481441 FKBP1AP62942 108 aaKnown RBP22.22■■□□□ 1.15
RXRB-203ENST00000481441 ANKRD13AQ8IZ07 590 aa22.22■■□□□ 1.15
RXRB-203ENST00000481441 VEZTQ9HBM0 779 aa22.22■■□□□ 1.15
RXRB-203ENST00000481441 TAF5LO75529 589 aa22.21■■□□□ 1.15
RXRB-203ENST00000481441 BRCA2P51587 3418 aa22.21■■□□□ 1.15
RXRB-203ENST00000481441 RASA3Q14644 834 aa22.2■■□□□ 1.14
RXRB-203ENST00000481441 HELBQ8NG08 1087 aaPredicted RBP22.2■■□□□ 1.14
RXRB-203ENST00000481441 ZNF333Q96JL9 665 aa22.2■■□□□ 1.14
RXRB-203ENST00000481441 ANKRD18BA2A2Z9 1011 aa22.19■■□□□ 1.14
RXRB-203ENST00000481441 TSR2Q969E8 191 aaKnown RBP22.19■■□□□ 1.14
RXRB-203ENST00000481441 MS4A4AQ96JQ5 239 aa22.19■■□□□ 1.14
RXRB-203ENST00000481441 SLC4A2P04920 1241 aa22.18■■□□□ 1.14
RXRB-203ENST00000481441 ZNF804AQ7Z570 1209 aa22.18■■□□□ 1.14
RXRB-203ENST00000481441 OPTNQ96CV9 577 aa22.18■■□□□ 1.14
RXRB-203ENST00000481441 TMEM106CQ9BVX2 250 aa22.18■■□□□ 1.14
RXRB-203ENST00000481441 MYH16Q9H6N6 1097 aa22.17■■□□□ 1.14
RXRB-203ENST00000481441 ELP3Q9H9T3 547 aa22.17■■□□□ 1.14
RXRB-203ENST00000481441 JAG2Q9Y219 1238 aa22.17■■□□□ 1.14
RXRB-203ENST00000481441 CEP290O15078 2479 aa22.17■■□□□ 1.14
RXRB-203ENST00000481441 TWISTNBQ3B726 338 aaPredicted RBP22.16■■□□□ 1.14
RXRB-203ENST00000481441 LINS1Q8NG48 757 aa22.16■■□□□ 1.14
RXRB-203ENST00000481441 COLQQ9Y215 455 aaPredicted RBP22.16■■□□□ 1.14
RXRB-203ENST00000481441 CACNA1FO60840 1977 aa22.15■■□□□ 1.14
RXRB-203ENST00000481441 RBM5P52756 815 aaKnown RBP eCLIP22.15■■□□□ 1.14
RXRB-203ENST00000481441 FLIIQ13045 1269 aa22.15■■□□□ 1.14
RXRB-203ENST00000481441 SPDYE2Q495Y8 402 aa22.15■■□□□ 1.14
RXRB-203ENST00000481441 PPP1R3FQ6ZSY5 799 aaPredicted RBP22.15■■□□□ 1.14
RXRB-203ENST00000481441 BRI3BPQ8WY22 251 aa22.15■■□□□ 1.14
RXRB-203ENST00000481441 PTCH2Q9Y6C5 1203 aa22.15■■□□□ 1.14
RXRB-203ENST00000481441 FOXO4P98177 505 aa22.14■■□□□ 1.14
RXRB-203ENST00000481441 IFIT5Q13325 482 aaKnown RBP22.14■■□□□ 1.14
RXRB-203ENST00000481441 TNFAIP1Q13829 316 aa22.14■■□□□ 1.14
RXRB-203ENST00000481441 SLC9C1Q4G0N8 1177 aa22.14■■□□□ 1.14
RXRB-203ENST00000481441 CDAN1Q8IWY9 1227 aa22.14■■□□□ 1.14
RXRB-203ENST00000481441 CNKSR2Q8WXI2 1034 aa22.14■■□□□ 1.14
RXRB-203ENST00000481441 DNAAF4Q8WXU2 420 aa22.14■■□□□ 1.14
RXRB-203ENST00000481441 TEPSINQ96N21 525 aa22.14■■□□□ 1.14
RXRB-203ENST00000481441 PRKRIP1Q9H875 184 aaPredicted RBP22.14■■□□□ 1.14
RXRB-203ENST00000481441 ZNF70Q9UC06 446 aaPredicted RBP22.14■■□□□ 1.14
RXRB-203ENST00000481441 FAM205AQ6ZU69 1335 aa22.14■■□□□ 1.13
RXRB-203ENST00000481441 TRIOBPQ9H2D6 2365 aa22.14■■□□□ 1.13
RXRB-203ENST00000481441 ARAP2Q8WZ64 1704 aa22.13■■□□□ 1.13
RXRB-203ENST00000481441 TAF1CQ15572 869 aaPredicted RBP22.13■■□□□ 1.13
RXRB-203ENST00000481441 NBPF11Q86T75 865 aa22.13■■□□□ 1.13
RXRB-203ENST00000481441 ZFYVE28Q9HCC9 887 aa22.13■■□□□ 1.13
RXRB-203ENST00000481441 CCL15-CCL14A0A0B4J2E2 113 aa22.12■■□□□ 1.13
RXRB-203ENST00000481441 ARHGEF6Q15052 776 aa22.12■■□□□ 1.13
RXRB-203ENST00000481441 CCL15Q16663 113 aa22.12■■□□□ 1.13
RXRB-203ENST00000481441 ZSWIM8A7E2V4 1837 aa22.12■■□□□ 1.13
RXRB-203ENST00000481441 FKBP5Q13451 457 aaPredicted RBP22.11■■□□□ 1.13
RXRB-203ENST00000481441 VGLL4Q14135 290 aa22.11■■□□□ 1.13
RXRB-203ENST00000481441 FAM43AQ8N2R8 423 aa22.11■■□□□ 1.13
RXRB-203ENST00000481441 TDRD3Q9H7E2 651 aaKnown RBP22.11■■□□□ 1.13
RXRB-203ENST00000481441 SERPINA10Q9UK55 444 aa22.11■■□□□ 1.13
RXRB-203ENST00000481441 GTF2A2P52657 109 aa22.1■■□□□ 1.13
RXRB-203ENST00000481441 SLC4A8Q2Y0W8 1093 aa22.1■■□□□ 1.13
RXRB-203ENST00000481441 MFSD14BQ5SR56 506 aa22.1■■□□□ 1.13
RXRB-203ENST00000481441 TDRD7Q8NHU6 1098 aaKnown RBP22.1■■□□□ 1.13
RXRB-203ENST00000481441 TTF2Q9UNY4 1162 aaKnown RBP22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms