RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 FAM89AQ96GI7 184 aa10.79□□□□□ -0.68
GARNL3-216ENST00000481242 DKC1O60832 514 aaKnown RBP eCLIP10.79□□□□□ -0.68
GARNL3-216ENST00000481242 C8orf34Q49A92 452 aa10.79□□□□□ -0.68
GARNL3-216ENST00000481242 TSHZ3Q63HK5 1081 aa10.79□□□□□ -0.68
GARNL3-216ENST00000481242 HELBQ8NG08 1087 aaPredicted RBP10.79□□□□□ -0.68
GARNL3-216ENST00000481242 TRIM47Q96LD4 638 aa10.79□□□□□ -0.68
GARNL3-216ENST00000481242 PICK1Q9NRD5 415 aa10.79□□□□□ -0.68
GARNL3-216ENST00000481242 TRPC5Q9UL62 973 aaPredicted RBP10.79□□□□□ -0.68
GARNL3-216ENST00000481242 SAMD9Q5K651 1589 aa10.79□□□□□ -0.68
GARNL3-216ENST00000481242 A0A1B0GUL7 405 aa10.79□□□□□ -0.68
GARNL3-216ENST00000481242 STK24Q9Y6E0 443 aa10.79□□□□□ -0.68
GARNL3-216ENST00000481242 SPDYE4A6NLX3 237 aa10.78□□□□□ -0.68
GARNL3-216ENST00000481242 HS2ST1Q7LGA3 356 aa10.78□□□□□ -0.68
GARNL3-216ENST00000481242 TBC1D5Q92609 795 aa10.78□□□□□ -0.68
GARNL3-216ENST00000481242 APPBP2Q92624 585 aa10.78□□□□□ -0.68
GARNL3-216ENST00000481242 MLH3Q9UHC1 1453 aa10.78□□□□□ -0.68
GARNL3-216ENST00000481242 RIMBP2O15034 1052 aa10.78□□□□□ -0.68
GARNL3-216ENST00000481242 KIF4BQ2VIQ3 1234 aa10.78□□□□□ -0.68
GARNL3-216ENST00000481242 LARGE2Q8N3Y3 721 aa10.78□□□□□ -0.68
GARNL3-216ENST00000481242 DDX12PQ92771 950 aa10.78□□□□□ -0.68
GARNL3-216ENST00000481242 INTS4Q96HW7 963 aaKnown RBP10.78□□□□□ -0.68
GARNL3-216ENST00000481242 PARP1P09874 1014 aaKnown RBP10.78□□□□□ -0.68
GARNL3-216ENST00000481242 LUZP1Q86V48 1076 aa10.78□□□□□ -0.68
GARNL3-216ENST00000481242 LRRC45Q96CN5 670 aa10.78□□□□□ -0.68
GARNL3-216ENST00000481242 TMOD4Q9NZQ9 345 aa10.78□□□□□ -0.68
GARNL3-216ENST00000481242 CGNQ9P2M7 1197 aaKnown RBP10.78□□□□□ -0.68
GARNL3-216ENST00000481242 CLIP2Q9UDT6 1046 aa10.78□□□□□ -0.68
GARNL3-216ENST00000481242 FBXO3Q9UK99 471 aa10.78□□□□□ -0.68
GARNL3-216ENST00000481242 PTPRTO14522 1441 aa10.78□□□□□ -0.68
GARNL3-216ENST00000481242 LIG1P18858 919 aa10.78□□□□□ -0.68
GARNL3-216ENST00000481242 LTKP29376 864 aa10.78□□□□□ -0.68
GARNL3-216ENST00000481242 DNAJC10Q8IXB1 793 aa10.78□□□□□ -0.68
GARNL3-216ENST00000481242 ZHX1Q9UKY1 873 aaPredicted RBP10.78□□□□□ -0.68
GARNL3-216ENST00000481242 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.78□□□□□ -0.68
GARNL3-216ENST00000481242 RNF123Q5XPI4 1314 aa10.77□□□□□ -0.68
GARNL3-216ENST00000481242 CTNNA2P26232 953 aa10.77□□□□□ -0.68
GARNL3-216ENST00000481242 PRIMPOLQ96LW4 560 aa10.77□□□□□ -0.68
GARNL3-216ENST00000481242 SPAG5Q96R06 1193 aa10.77□□□□□ -0.68
GARNL3-216ENST00000481242 CRACR2AQ9BSW2 395 aa10.77□□□□□ -0.68
GARNL3-216ENST00000481242 NLRP1Q9C000 1473 aa10.77□□□□□ -0.68
GARNL3-216ENST00000481242 KIF24Q5T7B8 1368 aa10.77□□□□□ -0.69
GARNL3-216ENST00000481242 N4BP3O15049 544 aa10.77□□□□□ -0.69
GARNL3-216ENST00000481242 APBA3O96018 575 aa10.77□□□□□ -0.69
GARNL3-216ENST00000481242 KRT2P35908 639 aa10.77□□□□□ -0.69
GARNL3-216ENST00000481242 RBM26Q5T8P6 1007 aaKnown RBP10.77□□□□□ -0.69
GARNL3-216ENST00000481242 ACTN2P35609 894 aa10.77□□□□□ -0.69
GARNL3-216ENST00000481242 ENOX2Q16206 610 aaKnown RBP10.77□□□□□ -0.69
GARNL3-216ENST00000481242 TNNI3KQ59H18 835 aa10.77□□□□□ -0.69
GARNL3-216ENST00000481242 CREB3L3Q68CJ9 461 aa10.77□□□□□ -0.69
GARNL3-216ENST00000481242 CCDC94Q9BW85 323 aaPredicted RBP10.77□□□□□ -0.69
GARNL3-216ENST00000481242 FPGT-TNNI3KV9GXZ4 949 aa10.77□□□□□ -0.69
GARNL3-216ENST00000481242 EFCAB6Q5THR3 1501 aa10.77□□□□□ -0.69
GARNL3-216ENST00000481242 MBD4O95243 580 aa10.77□□□□□ -0.69
GARNL3-216ENST00000481242 PRPHP41219 470 aa10.77□□□□□ -0.69
GARNL3-216ENST00000481242 TCIRG1Q13488 830 aa10.77□□□□□ -0.69
GARNL3-216ENST00000481242 TNFAIP1Q13829 316 aa10.77□□□□□ -0.69
GARNL3-216ENST00000481242 GCKRQ14397 625 aa10.77□□□□□ -0.69
GARNL3-216ENST00000481242 UTP14CQ5TAP6 766 aaKnown RBP10.77□□□□□ -0.69
GARNL3-216ENST00000481242 ZNF772Q68DY9 489 aaPredicted RBP10.76□□□□□ -0.69
GARNL3-216ENST00000481242 CCDC91Q7Z6B0 441 aa10.76□□□□□ -0.69
GARNL3-216ENST00000481242 NLGN1Q8N2Q7 840 aa10.76□□□□□ -0.69
GARNL3-216ENST00000481242 MIGA1Q8NAN2 632 aa10.76□□□□□ -0.69
GARNL3-216ENST00000481242 VTI1AQ96AJ9 217 aa10.76□□□□□ -0.69
GARNL3-216ENST00000481242 LZTS2Q9BRK4 669 aa10.76□□□□□ -0.69
GARNL3-216ENST00000481242 PNMA2Q9UL42 364 aa10.76□□□□□ -0.69
GARNL3-216ENST00000481242 NPHP4O75161 1426 aaPredicted RBP10.76□□□□□ -0.69
GARNL3-216ENST00000481242 TMEM94Q12767 1356 aa10.76□□□□□ -0.69
GARNL3-216ENST00000481242 ZNF496Q96IT1 587 aaPredicted RBP10.76□□□□□ -0.69
GARNL3-216ENST00000481242 GSTTP1A0A1W2PQM5 241 aa10.76□□□□□ -0.69
GARNL3-216ENST00000481242 BICDL2A1A5D9 508 aa10.76□□□□□ -0.69
GARNL3-216ENST00000481242 POTEB2H3BUK9 544 aa10.76□□□□□ -0.69
GARNL3-216ENST00000481242 NIM1KQ8IY84 436 aa10.76□□□□□ -0.69
GARNL3-216ENST00000481242 TCHPQ9BT92 498 aa10.76□□□□□ -0.69
GARNL3-216ENST00000481242 FAM107BQ9H098 131 aa10.76□□□□□ -0.69
GARNL3-216ENST00000481242 ZBTB7BO15156 539 aaPredicted RBP10.75□□□□□ -0.69
GARNL3-216ENST00000481242 KIAA0754O94854 1291 aa10.75□□□□□ -0.69
GARNL3-216ENST00000481242 HCLS1P14317 486 aaPredicted RBP10.75□□□□□ -0.69
GARNL3-216ENST00000481242 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.75□□□□□ -0.69
GARNL3-216ENST00000481242 TTC12Q9H892 705 aaPredicted RBP10.75□□□□□ -0.69
GARNL3-216ENST00000481242 IBTKQ9P2D0 1353 aaPredicted RBP10.75□□□□□ -0.69
GARNL3-216ENST00000481242 SPTLC2O15270 562 aa10.75□□□□□ -0.69
GARNL3-216ENST00000481242 PHACTR2O75167 634 aa10.75□□□□□ -0.69
GARNL3-216ENST00000481242 A1BGP04217 495 aa10.75□□□□□ -0.69
GARNL3-216ENST00000481242 CHMLP26374 656 aa10.75□□□□□ -0.69
GARNL3-216ENST00000481242 EIF4A1P60842 406 aaKnown RBP10.75□□□□□ -0.69
GARNL3-216ENST00000481242 RPS8P62241 208 aaKnown RBP10.75□□□□□ -0.69
GARNL3-216ENST00000481242 PLS1Q14651 629 aa10.75□□□□□ -0.69
GARNL3-216ENST00000481242 SLC4A8Q2Y0W8 1093 aa10.75□□□□□ -0.69
GARNL3-216ENST00000481242 RRAGBQ5VZM2 374 aa10.75□□□□□ -0.69
GARNL3-216ENST00000481242 TMC4Q7Z404 712 aa10.75□□□□□ -0.69
GARNL3-216ENST00000481242 AKR1B10O60218 316 aa10.75□□□□□ -0.69
GARNL3-216ENST00000481242 ASIC1P78348 528 aa10.75□□□□□ -0.69
GARNL3-216ENST00000481242 SKIDA1Q1XH10 827 aa10.75□□□□□ -0.69
GARNL3-216ENST00000481242 HS1BP3Q53T59 392 aa10.75□□□□□ -0.69
GARNL3-216ENST00000481242 DTHD1Q6ZMT9 781 aa10.75□□□□□ -0.69
GARNL3-216ENST00000481242 CARD10Q9BWT7 1032 aa10.75□□□□□ -0.69
GARNL3-216ENST00000481242 CYLC1P35663 651 aaPredicted RBP10.75□□□□□ -0.69
GARNL3-216ENST00000481242 KRT24Q2M2I5 525 aa10.75□□□□□ -0.69
GARNL3-216ENST00000481242 TAX1BP1Q86VP1 789 aa10.75□□□□□ -0.69
GARNL3-216ENST00000481242 IQUBQ8NA54 791 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms