RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, human

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-223	ENST00000481173	DNM1	Q05193	864 aa	Known RBP	7.03	□□□□□ -1.28
CCNL1-223	ENST00000481173	C19orf57	Q0VDD7	668 aa		7.03	□□□□□ -1.28
CCNL1-223	ENST00000481173	ABI1	Q8IZP0	508 aa		7.03	□□□□□ -1.28
CCNL1-223	ENST00000481173	GGNBP2	Q9H3C7	697 aa		7.03	□□□□□ -1.28
CCNL1-223	ENST00000481173	SOX13	Q9UN79	622 aa		7.03	□□□□□ -1.28
CCNL1-223	ENST00000481173	F13B	P05160	661 aa		7.02	□□□□□ -1.29
CCNL1-223	ENST00000481173	ARL4D	P49703	201 aa		7.02	□□□□□ -1.29
CCNL1-223	ENST00000481173	C8orf34	Q49A92	452 aa		7.02	□□□□□ -1.29
CCNL1-223	ENST00000481173	SHISA5	Q8N114	240 aa		7.02	□□□□□ -1.29
CCNL1-223	ENST00000481173	C12orf50	Q8NA57	414 aa	Predicted RBP	7.02	□□□□□ -1.29
CCNL1-223	ENST00000481173	USP26	Q9BXU7	913 aa		7.02	□□□□□ -1.29
CCNL1-223	ENST00000481173	CHRD	Q9H2X0	955 aa		7.02	□□□□□ -1.29
CCNL1-223	ENST00000481173	ATG3	Q9NT62	314 aa		7.02	□□□□□ -1.29
CCNL1-223	ENST00000481173	LEMD3	Q9Y2U8	911 aa		7.02	□□□□□ -1.29
CCNL1-223	ENST00000481173	SOX1	O00570	391 aa	Predicted RBP	7.01	□□□□□ -1.29
CCNL1-223	ENST00000481173	ATP2B4	P23634	1241 aa		7.01	□□□□□ -1.29
CCNL1-223	ENST00000481173	NUTM2G	Q5VZR2	741 aa		7.01	□□□□□ -1.29
CCNL1-223	ENST00000481173	MEGF11	A6BM72	1044 aa		7	□□□□□ -1.29
CCNL1-223	ENST00000481173	PDGFA	P04085	211 aa		7	□□□□□ -1.29
CCNL1-223	ENST00000481173	IKBKE	Q14164	716 aa		7	□□□□□ -1.29
CCNL1-223	ENST00000481173	XKR5	Q6UX68	686 aa		7	□□□□□ -1.29
CCNL1-223	ENST00000481173	VN1R5	Q7Z5H4	357 aa		7	□□□□□ -1.29
CCNL1-223	ENST00000481173	OSMR	Q99650	979 aa		7	□□□□□ -1.29
CCNL1-223	ENST00000481173	OSBPL1A	Q9BXW6	950 aa		7	□□□□□ -1.29
CCNL1-223	ENST00000481173	ANGEL1	Q9UNK9	670 aa	Known RBP	7	□□□□□ -1.29
CCNL1-223	ENST00000481173	DLGAP3	O95886	979 aa		6.99	□□□□□ -1.29
CCNL1-223	ENST00000481173	DRD2	P14416	443 aa		6.99	□□□□□ -1.29
CCNL1-223	ENST00000481173	NFKBIB	Q15653	356 aa		6.99	□□□□□ -1.29
CCNL1-223	ENST00000481173	MSMP	Q1L6U9	139 aa		6.99	□□□□□ -1.29
CCNL1-223	ENST00000481173	TMEM102	Q8N9M5	508 aa	Predicted RBP	6.99	□□□□□ -1.29
CCNL1-223	ENST00000481173	TTC16	Q8NEE8	873 aa		6.99	□□□□□ -1.29
CCNL1-223	ENST00000481173	GIMAP7	Q8NHV1	300 aa		6.99	□□□□□ -1.29
CCNL1-223	ENST00000481173	NXPE3	Q969Y0	559 aa		6.99	□□□□□ -1.29
CCNL1-223	ENST00000481173	ZKSCAN3	Q9BRR0	538 aa		6.99	□□□□□ -1.29
CCNL1-223	ENST00000481173	TMPRSS13	Q9BYE2	586 aa		6.99	□□□□□ -1.29
CCNL1-223	ENST00000481173	LOC100289279	A0A1B0GTE1	492 aa		6.98	□□□□□ -1.29
CCNL1-223	ENST00000481173	FAM95C	A0A1B0GW59	222 aa		6.98	□□□□□ -1.29
CCNL1-223	ENST00000481173	EREG	O14944	169 aa		6.98	□□□□□ -1.29
CCNL1-223	ENST00000481173	TIAF1	O95411	115 aa		6.98	□□□□□ -1.29
CCNL1-223	ENST00000481173	RPLP1	P05386	114 aa	Known RBP	6.98	□□□□□ -1.29
CCNL1-223	ENST00000481173	FOSL1	P15407	271 aa		6.98	□□□□□ -1.29
CCNL1-223	ENST00000481173	PCSK2	P16519	638 aa		6.98	□□□□□ -1.29
CCNL1-223	ENST00000481173	NOM1	Q5C9Z4	860 aa	Known RBP	6.98	□□□□□ -1.29
CCNL1-223	ENST00000481173	SMG8	Q8ND04	991 aa	Known RBP	6.98	□□□□□ -1.29
CCNL1-223	ENST00000481173	FBLIM1	Q8WUP2	373 aa		6.98	□□□□□ -1.29
CCNL1-223	ENST00000481173	BSND	Q8WZ55	320 aa		6.98	□□□□□ -1.29
CCNL1-223	ENST00000481173	MPST	P25325	297 aa		6.97	□□□□□ -1.29
CCNL1-223	ENST00000481173	FZD5	Q13467	585 aa		6.97	□□□□□ -1.29
CCNL1-223	ENST00000481173	CDPF1	Q6NVV7	123 aa		6.97	□□□□□ -1.29
CCNL1-223	ENST00000481173	NFXL1	Q6ZNB6	911 aa		6.97	□□□□□ -1.29
CCNL1-223	ENST00000481173	HELQ	Q8TDG4	1101 aa		6.97	□□□□□ -1.29
CCNL1-223	ENST00000481173	ASAP3	Q8TDY4	903 aa		6.97	□□□□□ -1.29
CCNL1-223	ENST00000481173	CYP4F12	Q9HCS2	524 aa		6.97	□□□□□ -1.29
CCNL1-223	ENST00000481173	CCDC39	Q9UFE4	941 aa		6.97	□□□□□ -1.29
CCNL1-223	ENST00000481173	MZF1	P28698	734 aa	Predicted RBP	6.96	□□□□□ -1.3
CCNL1-223	ENST00000481173	ADM	P35318	185 aa		6.96	□□□□□ -1.3
CCNL1-223	ENST00000481173	EIF1AX	P47813	144 aa	Known RBP	6.96	□□□□□ -1.3
CCNL1-223	ENST00000481173	USP11	P51784	963 aa		6.96	□□□□□ -1.3
CCNL1-223	ENST00000481173	PAOX	Q6QHF9	649 aa		6.96	□□□□□ -1.3
CCNL1-223	ENST00000481173	PMEPA1	Q969W9	287 aa		6.96	□□□□□ -1.3
CCNL1-223	ENST00000481173	SUGCT	Q9HAC7	445 aa		6.96	□□□□□ -1.3
CCNL1-223	ENST00000481173	PHACTR2	O75167	634 aa		6.95	□□□□□ -1.3
CCNL1-223	ENST00000481173	TP53INP2	Q8IXH6	220 aa		6.95	□□□□□ -1.3
CCNL1-223	ENST00000481173	LATS2	Q9NRM7	1088 aa		6.95	□□□□□ -1.3
CCNL1-223	ENST00000481173	POLI	Q9UNA4	740 aa		6.95	□□□□□ -1.3
CCNL1-223	ENST00000481173	METTL12	A8MUP2	240 aa		6.94	□□□□□ -1.3
CCNL1-223	ENST00000481173	ESRRA	P11474	423 aa	Predicted RBP	6.94	□□□□□ -1.3
CCNL1-223	ENST00000481173	GSTM4	Q03013	218 aa		6.94	□□□□□ -1.3
CCNL1-223	ENST00000481173	MTMR3	Q13615	1198 aa		6.94	□□□□□ -1.3
CCNL1-223	ENST00000481173	EXOSC6	Q5RKV6	272 aa	Known RBP	6.94	□□□□□ -1.3
CCNL1-223	ENST00000481173	OGFOD2	Q6N063	350 aa		6.94	□□□□□ -1.3
CCNL1-223	ENST00000481173	VSIG10L	Q86VR7	867 aa		6.94	□□□□□ -1.3
CCNL1-223	ENST00000481173	C2CD4A	Q8NCU7	369 aa	Predicted RBP	6.94	□□□□□ -1.3
CCNL1-223	ENST00000481173	PBXIP1	Q96AQ6	731 aa		6.94	□□□□□ -1.3
CCNL1-223	ENST00000481173	TBC1D32	Q96NH3	1257 aa		6.94	□□□□□ -1.3
CCNL1-223	ENST00000481173	FOXD3	Q9UJU5	478 aa	Predicted RBP	6.94	□□□□□ -1.3
CCNL1-223	ENST00000481173	FAM170B	A6NMN3	283 aa		6.93	□□□□□ -1.3
CCNL1-223	ENST00000481173	CYP26A1	O43174	497 aa		6.93	□□□□□ -1.3
CCNL1-223	ENST00000481173	TNFRSF21	O75509	655 aa		6.93	□□□□□ -1.3
CCNL1-223	ENST00000481173	PRNP	P04156	253 aa		6.93	□□□□□ -1.3
CCNL1-223	ENST00000481173	EDN3	P14138	238 aa		6.93	□□□□□ -1.3
CCNL1-223	ENST00000481173	GTF3C2	Q8WUA4	911 aa	Predicted RBP	6.93	□□□□□ -1.3
CCNL1-223	ENST00000481173	PRKAG2	Q9UGJ0	569 aa		6.93	□□□□□ -1.3
CCNL1-223	ENST00000481173	SOX4	Q06945	474 aa	Predicted RBP	6.92	□□□□□ -1.3
CCNL1-223	ENST00000481173	COL19A1	Q14993	1142 aa		6.92	□□□□□ -1.3
CCNL1-223	ENST00000481173	CPSF6	Q16630	551 aa	Known RBP eCLIP	6.92	□□□□□ -1.3
CCNL1-223	ENST00000481173	LCE1D	Q5T752	114 aa		6.92	□□□□□ -1.3
CCNL1-223	ENST00000481173	PEAR1	Q5VY43	1037 aa	Predicted RBP	6.92	□□□□□ -1.3
CCNL1-223	ENST00000481173	CBLL1	Q75N03	491 aa		6.92	□□□□□ -1.3
CCNL1-223	ENST00000481173	ZAR1	Q86SH2	424 aa		6.92	□□□□□ -1.3
CCNL1-223	ENST00000481173	FBXL18	Q96ME1	805 aa		6.92	□□□□□ -1.3
CCNL1-223	ENST00000481173	METTL22	Q9BUU2	404 aa	Predicted RBP	6.92	□□□□□ -1.3
CCNL1-223	ENST00000481173	BHLHE41	Q9C0J9	482 aa	Predicted RBP	6.92	□□□□□ -1.3
CCNL1-223	ENST00000481173	SOX17	Q9H6I2	414 aa	Predicted RBP	6.92	□□□□□ -1.3
CCNL1-223	ENST00000481173	AAMP	Q13685	434 aa		6.91	□□□□□ -1.3
CCNL1-223	ENST00000481173	FLCN	Q8NFG4	579 aa		6.91	□□□□□ -1.3
CCNL1-223	ENST00000481173	SNX29	Q8TEQ0	813 aa		6.91	□□□□□ -1.3
CCNL1-223	ENST00000481173	POLR3D	P05423	398 aa	Predicted RBP	6.9	□□□□□ -1.3
CCNL1-223	ENST00000481173	ADH5	P11766	374 aa		6.9	□□□□□ -1.3
CCNL1-223	ENST00000481173	RAB6A	P20340	208 aa		6.9	□□□□□ -1.3

Retrieved 100 of 20,778 RNA–protein pairs in 125.4 ms