RNA–Protein interactions for RNA: ENST00000481109.5

PRPF4B-206, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-206ENST00000481109 TEKT1Q969V4 418 aa11.83□□□□□ -0.52
PRPF4B-206ENST00000481109 SRCIN1Q9C0H9 1055 aa11.83□□□□□ -0.52
PRPF4B-206ENST00000481109 VCPKMTQ9H867 229 aa11.83□□□□□ -0.52
PRPF4B-206ENST00000481109 SLC39A2Q9NP94 309 aa11.83□□□□□ -0.52
PRPF4B-206ENST00000481109 NUP160Q12769 1436 aa11.83□□□□□ -0.52
PRPF4B-206ENST00000481109 LAMC1P11047 1609 aa11.83□□□□□ -0.52
PRPF4B-206ENST00000481109 FRMD3A2A2Y4 597 aa11.83□□□□□ -0.52
PRPF4B-206ENST00000481109 IPO5O00410 1097 aaKnown RBP11.83□□□□□ -0.52
PRPF4B-206ENST00000481109 MEFVO15553 781 aaPredicted RBP11.83□□□□□ -0.52
PRPF4B-206ENST00000481109 E2F6O75461 281 aa11.83□□□□□ -0.52
PRPF4B-206ENST00000481109 ATP2B2Q01814 1243 aa11.83□□□□□ -0.52
PRPF4B-206ENST00000481109 LSM14AQ8ND56 463 aaKnown RBP11.83□□□□□ -0.52
PRPF4B-206ENST00000481109 TRIM58Q8NG06 486 aa11.83□□□□□ -0.52
PRPF4B-206ENST00000481109 ARHGAP45Q92619 1136 aa11.83□□□□□ -0.52
PRPF4B-206ENST00000481109 INCENPQ9NQS7 918 aa11.83□□□□□ -0.52
PRPF4B-206ENST00000481109 ZBTB40Q9NUA8 1239 aa11.83□□□□□ -0.52
PRPF4B-206ENST00000481109 RTEL1Q9NZ71 1219 aa11.83□□□□□ -0.52
PRPF4B-206ENST00000481109 CNPY2Q9Y2B0 182 aa11.83□□□□□ -0.52
PRPF4B-206ENST00000481109 ABCC10Q5T3U5 1492 aa11.82□□□□□ -0.52
PRPF4B-206ENST00000481109 N4BP1O75113 896 aaKnown RBP11.82□□□□□ -0.52
PRPF4B-206ENST00000481109 RNF8O76064 485 aa11.82□□□□□ -0.52
PRPF4B-206ENST00000481109 VCAM1P19320 739 aa11.82□□□□□ -0.52
PRPF4B-206ENST00000481109 PSME1Q06323 249 aa11.82□□□□□ -0.52
PRPF4B-206ENST00000481109 IFFO1Q0D2I5 559 aa11.82□□□□□ -0.52
PRPF4B-206ENST00000481109 IFT88Q13099 833 aa11.82□□□□□ -0.52
PRPF4B-206ENST00000481109 CCDC40Q4G0X9 1142 aa11.82□□□□□ -0.52
PRPF4B-206ENST00000481109 ANO6Q4KMQ2 910 aa11.82□□□□□ -0.52
PRPF4B-206ENST00000481109 GET4Q7L5D6 327 aaPredicted RBP11.82□□□□□ -0.52
PRPF4B-206ENST00000481109 CCDC47Q96A33 483 aaKnown RBP11.82□□□□□ -0.52
PRPF4B-206ENST00000481109 MTA3Q9BTC8 594 aa11.82□□□□□ -0.52
PRPF4B-206ENST00000481109 TSPYL2Q9H2G4 693 aaPredicted RBP11.82□□□□□ -0.52
PRPF4B-206ENST00000481109 SPATA7Q9P0W8 599 aa11.82□□□□□ -0.52
PRPF4B-206ENST00000481109 ADCY10Q96PN6 1610 aa11.82□□□□□ -0.52
PRPF4B-206ENST00000481109 CDC42BPAQ5VT25 1732 aa11.82□□□□□ -0.52
PRPF4B-206ENST00000481109 PRPF6O94906 941 aaKnown RBP11.82□□□□□ -0.52
PRPF4B-206ENST00000481109 DCTN1Q14203 1278 aa11.82□□□□□ -0.52
PRPF4B-206ENST00000481109 CCDC181Q5TID7 509 aa11.82□□□□□ -0.52
PRPF4B-206ENST00000481109 TRIM65Q6PJ69 517 aa11.82□□□□□ -0.52
PRPF4B-206ENST00000481109 MSANTD4Q8NCY6 345 aa11.82□□□□□ -0.52
PRPF4B-206ENST00000481109 PHC3Q8NDX5 983 aa11.82□□□□□ -0.52
PRPF4B-206ENST00000481109 GORASP1Q9BQQ3 440 aa11.82□□□□□ -0.52
PRPF4B-206ENST00000481109 PAPOLBQ9NRJ5 636 aaKnown RBP11.82□□□□□ -0.52
PRPF4B-206ENST00000481109 TMEM98Q9Y2Y6 226 aa11.82□□□□□ -0.52
PRPF4B-206ENST00000481109 CROCC2H7BZ55 1655 aa11.81□□□□□ -0.52
PRPF4B-206ENST00000481109 F8VZ95 297 aa11.81□□□□□ -0.52
PRPF4B-206ENST00000481109 GOLGA6L19H0YKK7 550 aa11.81□□□□□ -0.52
PRPF4B-206ENST00000481109 URI1O94763 535 aaPredicted RBP11.81□□□□□ -0.52
PRPF4B-206ENST00000481109 ARID5BQ14865 1188 aa11.81□□□□□ -0.52
PRPF4B-206ENST00000481109 CCDC57Q2TAC2 916 aa11.81□□□□□ -0.52
PRPF4B-206ENST00000481109 CCDC38Q502W7 563 aa11.81□□□□□ -0.52
PRPF4B-206ENST00000481109 GORABQ5T7V8 394 aa11.81□□□□□ -0.52
PRPF4B-206ENST00000481109 FAM114A1Q8IWE2 563 aa11.81□□□□□ -0.52
PRPF4B-206ENST00000481109 GALNT15Q8N3T1 639 aa11.81□□□□□ -0.52
PRPF4B-206ENST00000481109 SAMD3Q8N6K7 520 aa11.81□□□□□ -0.52
PRPF4B-206ENST00000481109 CXorf38Q8TB03 319 aa11.81□□□□□ -0.52
PRPF4B-206ENST00000481109 POLR3CQ9BUI4 534 aaPredicted RBP11.81□□□□□ -0.52
PRPF4B-206ENST00000481109 TRIM4Q9C037 500 aa11.81□□□□□ -0.52
PRPF4B-206ENST00000481109 NUP62CLQ9H1M0 184 aa11.81□□□□□ -0.52
PRPF4B-206ENST00000481109 BIN2Q9UBW5 565 aaPredicted RBP11.81□□□□□ -0.52
PRPF4B-206ENST00000481109 ABCF2Q9UG63 623 aa11.81□□□□□ -0.52
PRPF4B-206ENST00000481109 FRMD4BQ9Y2L6 1034 aa11.81□□□□□ -0.52
PRPF4B-206ENST00000481109 MRFAP1Q9Y605 127 aa11.81□□□□□ -0.52
PRPF4B-206ENST00000481109 TCHHQ07283 1943 aa11.81□□□□□ -0.52
PRPF4B-206ENST00000481109 PPP2R3AQ06190 1150 aa11.81□□□□□ -0.52
PRPF4B-206ENST00000481109 ACTN3Q08043 901 aaPredicted RBP11.81□□□□□ -0.52
PRPF4B-206ENST00000481109 CCDC80Q76M96 950 aa11.81□□□□□ -0.52
PRPF4B-206ENST00000481109 CEP57Q86XR8 500 aa11.81□□□□□ -0.52
PRPF4B-206ENST00000481109 PARP9Q8IXQ6 854 aa11.81□□□□□ -0.52
PRPF4B-206ENST00000481109 TMEM165Q9HC07 324 aa11.81□□□□□ -0.52
PRPF4B-206ENST00000481109 DNAAF2Q9NVR5 837 aaKnown RBP11.81□□□□□ -0.52
PRPF4B-206ENST00000481109 GGA2Q9UJY4 613 aa11.81□□□□□ -0.52
PRPF4B-206ENST00000481109 RNF40O75150 1001 aa11.8□□□□□ -0.52
PRPF4B-206ENST00000481109 DPY19L2Q6NUT2 758 aa11.8□□□□□ -0.52
PRPF4B-206ENST00000481109 BZW1Q7L1Q6 419 aaKnown RBP11.8□□□□□ -0.52
PRPF4B-206ENST00000481109 CUL5Q93034 780 aa11.8□□□□□ -0.52
PRPF4B-206ENST00000481109 CCDC102AQ96A19 550 aa11.8□□□□□ -0.52
PRPF4B-206ENST00000481109 NAT10Q9H0A0 1025 aaKnown RBP11.8□□□□□ -0.52
PRPF4B-206ENST00000481109 ATP6V1G1O75348 118 aa11.79□□□□□ -0.52
PRPF4B-206ENST00000481109 GNAI3P08754 354 aa11.79□□□□□ -0.52
PRPF4B-206ENST00000481109 ZSCAN22P10073 491 aaPredicted RBP11.79□□□□□ -0.52
PRPF4B-206ENST00000481109 ZNF165P49910 485 aa11.79□□□□□ -0.52
PRPF4B-206ENST00000481109 IRAK1P51617 712 aa11.79□□□□□ -0.52
PRPF4B-206ENST00000481109 PABPC4Q13310 644 aaKnown RBP eCLIP11.79□□□□□ -0.52
PRPF4B-206ENST00000481109 PRPF4BQ13523 1007 aaKnown RBP11.79□□□□□ -0.52
PRPF4B-206ENST00000481109 GNL2Q13823 731 aaKnown RBP11.79□□□□□ -0.52
PRPF4B-206ENST00000481109 CASP8Q14790 479 aa11.79□□□□□ -0.52
PRPF4B-206ENST00000481109 HOMER1Q86YM7 354 aa11.79□□□□□ -0.52
PRPF4B-206ENST00000481109 IQCF2Q8IXL9 164 aa11.79□□□□□ -0.52
PRPF4B-206ENST00000481109 IL17RAQ96F46 866 aa11.79□□□□□ -0.52
PRPF4B-206ENST00000481109 ACSBG1Q96GR2 724 aa11.79□□□□□ -0.52
PRPF4B-206ENST00000481109 TRPC6Q9Y210 931 aa11.79□□□□□ -0.52
PRPF4B-206ENST00000481109 CDHR2Q9BYE9 1310 aa11.79□□□□□ -0.52
PRPF4B-206ENST00000481109 RGS12O14924 1447 aa11.79□□□□□ -0.52
PRPF4B-206ENST00000481109 ABCA8O94911 1581 aa11.79□□□□□ -0.52
PRPF4B-206ENST00000481109 ATP5JP18859 108 aa11.79□□□□□ -0.52
PRPF4B-206ENST00000481109 RPL13P26373 211 aaKnown RBP11.79□□□□□ -0.52
PRPF4B-206ENST00000481109 MAGEA10P43363 369 aaPredicted RBP11.79□□□□□ -0.52
PRPF4B-206ENST00000481109 MPP3Q13368 585 aa11.79□□□□□ -0.52
PRPF4B-206ENST00000481109 CUL3Q13618 768 aa11.79□□□□□ -0.52
PRPF4B-206ENST00000481109 KLHL10Q6JEL2 608 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms