RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 CCDC160A6NGH7 325 aa10.75□□□□□ -0.69
VEGFA-212ENST00000480614 PPP1R7Q15435 360 aa10.75□□□□□ -0.69
VEGFA-212ENST00000480614 SETDB2Q96T68 719 aa10.75□□□□□ -0.69
VEGFA-212ENST00000480614 USH1CQ9Y6N9 552 aa10.75□□□□□ -0.69
VEGFA-212ENST00000480614 UNC13AQ9UPW8 1703 aa10.75□□□□□ -0.69
VEGFA-212ENST00000480614 SOS1Q07889 1333 aaPredicted RBP10.75□□□□□ -0.69
VEGFA-212ENST00000480614 EPB41P11171 864 aaKnown RBP10.75□□□□□ -0.69
VEGFA-212ENST00000480614 SRGAP1Q7Z6B7 1085 aa10.75□□□□□ -0.69
VEGFA-212ENST00000480614 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.75□□□□□ -0.694e-7■■□□□ 12.9
VEGFA-212ENST00000480614 TAF12Q16514 161 aa10.74□□□□□ -0.69
VEGFA-212ENST00000480614 INF2Q27J81 1249 aa10.74□□□□□ -0.69
VEGFA-212ENST00000480614 ABCA10Q8WWZ4 1543 aa10.74□□□□□ -0.69
VEGFA-212ENST00000480614 TERF1P54274 439 aa10.74□□□□□ -0.69
VEGFA-212ENST00000480614 ANO6Q4KMQ2 910 aa10.74□□□□□ -0.69
VEGFA-212ENST00000480614 FAM169AQ9Y6X4 670 aa10.74□□□□□ -0.69
VEGFA-212ENST00000480614 CYP7A1P22680 504 aa10.74□□□□□ -0.69
VEGFA-212ENST00000480614 TAOK1Q7L7X3 1001 aa10.74□□□□□ -0.69
VEGFA-212ENST00000480614 NUCB1Q02818 461 aa10.74□□□□□ -0.69
VEGFA-212ENST00000480614 CPLX4Q7Z7G2 160 aa10.74□□□□□ -0.69
VEGFA-212ENST00000480614 NME9Q86XW9 330 aa10.74□□□□□ -0.69
VEGFA-212ENST00000480614 KDM5BQ9UGL1 1544 aa10.74□□□□□ -0.69
VEGFA-212ENST00000480614 CA8P35219 290 aa10.74□□□□□ -0.69
VEGFA-212ENST00000480614 TCHPQ9BT92 498 aa10.74□□□□□ -0.69
VEGFA-212ENST00000480614 HCLS1P14317 486 aaPredicted RBP10.74□□□□□ -0.69
VEGFA-212ENST00000480614 AFMP43652 599 aa10.74□□□□□ -0.69
VEGFA-212ENST00000480614 PLCB3Q01970 1234 aa10.74□□□□□ -0.69
VEGFA-212ENST00000480614 WDR44Q5JSH3 913 aa10.74□□□□□ -0.69
VEGFA-212ENST00000480614 RPUSD2Q8IZ73 545 aaKnown RBP10.74□□□□□ -0.69
VEGFA-212ENST00000480614 IQUBQ8NA54 791 aa10.74□□□□□ -0.69
VEGFA-212ENST00000480614 RSRC1Q96IZ7 334 aaKnown RBP10.74□□□□□ -0.69
VEGFA-212ENST00000480614 ANKRD2Q9GZV1 360 aa10.74□□□□□ -0.69
VEGFA-212ENST00000480614 SH2D4AQ9H788 454 aa10.74□□□□□ -0.69
VEGFA-212ENST00000480614 STX10O60499 249 aa10.74□□□□□ -0.69
VEGFA-212ENST00000480614 SMTNP53814 917 aa10.74□□□□□ -0.69
VEGFA-212ENST00000480614 PRPF31Q8WWY3 499 aaKnown RBP10.74□□□□□ -0.69
VEGFA-212ENST00000480614 DNAI1Q9UI46 699 aa10.74□□□□□ -0.69
VEGFA-212ENST00000480614 SLC4A4Q9Y6R1 1079 aa10.74□□□□□ -0.69
VEGFA-212ENST00000480614 MSH6P52701 1360 aa10.73□□□□□ -0.69
VEGFA-212ENST00000480614 ANKRD13DQ6ZTN6 518 aa10.73□□□□□ -0.69
VEGFA-212ENST00000480614 DNAJC21Q5F1R6 531 aaKnown RBP10.73□□□□□ -0.69
VEGFA-212ENST00000480614 ZHX1Q9UKY1 873 aaPredicted RBP10.73□□□□□ -0.69
VEGFA-212ENST00000480614 CDAN1Q8IWY9 1227 aa10.73□□□□□ -0.69
VEGFA-212ENST00000480614 BRDTQ58F21 947 aaPredicted RBP10.73□□□□□ -0.69
VEGFA-212ENST00000480614 UBL4BQ8N7F7 174 aa10.73□□□□□ -0.69
VEGFA-212ENST00000480614 PPFIBP2Q8ND30 876 aa10.73□□□□□ -0.69
VEGFA-212ENST00000480614 ZSWIM4Q9H7M6 989 aa10.73□□□□□ -0.69
VEGFA-212ENST00000480614 DUOX2Q9NRD8 1548 aa10.73□□□□□ -0.69
VEGFA-212ENST00000480614 ZFYVE9O95405 1425 aa10.73□□□□□ -0.69
VEGFA-212ENST00000480614 PI4KAP2A4QPH2 592 aa10.73□□□□□ -0.69
VEGFA-212ENST00000480614 PI4KAP1Q8N8J0 262 aa10.73□□□□□ -0.69
VEGFA-212ENST00000480614 ELP1O95163 1332 aa10.73□□□□□ -0.69
VEGFA-212ENST00000480614 TYRO3Q06418 890 aa10.73□□□□□ -0.69
VEGFA-212ENST00000480614 CACNA2D3Q8IZS8 1091 aa10.73□□□□□ -0.69
VEGFA-212ENST00000480614 VCX3BQ9H321 246 aa10.73□□□□□ -0.69
VEGFA-212ENST00000480614 PRDM10Q9NQV6 1147 aa10.73□□□□□ -0.69
VEGFA-212ENST00000480614 FAM76AQ8TAV0 307 aa10.73□□□□□ -0.69
VEGFA-212ENST00000480614 PANK2Q9BZ23 570 aa10.73□□□□□ -0.69
VEGFA-212ENST00000480614 SPTLC2O15270 562 aa10.73□□□□□ -0.69
VEGFA-212ENST00000480614 FYB2Q5VWT5 728 aa10.73□□□□□ -0.69
VEGFA-212ENST00000480614 GPATCH11Q8N954 259 aa10.73□□□□□ -0.69
VEGFA-212ENST00000480614 ZBTB3Q9H5J0 574 aa10.73□□□□□ -0.69
VEGFA-212ENST00000480614 EIF4G3O43432 1585 aaKnown RBP10.73□□□□□ -0.69
VEGFA-212ENST00000480614 GIGYF1O75420 1035 aaPredicted RBP10.72□□□□□ -0.69
VEGFA-212ENST00000480614 UBXN1Q04323 297 aa10.72□□□□□ -0.69
VEGFA-212ENST00000480614 ZNF622Q969S3 477 aaKnown RBP eCLIP10.72□□□□□ -0.692e-16■□□□□ 8.9
VEGFA-212ENST00000480614 MMRN2Q9H8L6 949 aa10.72□□□□□ -0.69
VEGFA-212ENST00000480614 LUC7L2Q9Y383 392 aaKnown RBP10.72□□□□□ -0.69
VEGFA-212ENST00000480614 MAGEB6P1A0A0J9YX57 407 aa10.72□□□□□ -0.69
VEGFA-212ENST00000480614 PLS1Q14651 629 aa10.72□□□□□ -0.69
VEGFA-212ENST00000480614 SH2D4BQ5SQS7 431 aa10.72□□□□□ -0.69
VEGFA-212ENST00000480614 SERPINA10Q9UK55 444 aa10.72□□□□□ -0.69
VEGFA-212ENST00000480614 ZNF710Q8N1W2 664 aa10.72□□□□□ -0.69
VEGFA-212ENST00000480614 SELENOSQ9BQE4 189 aa10.72□□□□□ -0.69
VEGFA-212ENST00000480614 GIPC1O14908 333 aa10.72□□□□□ -0.69
VEGFA-212ENST00000480614 VCXQ9H320 206 aa10.72□□□□□ -0.69
VEGFA-212ENST00000480614 TMX1Q9H3N1 280 aa10.72□□□□□ -0.69
VEGFA-212ENST00000480614 NPHP3Q7Z494 1330 aa10.72□□□□□ -0.69
VEGFA-212ENST00000480614 TEX14Q8IWB6 1497 aa10.72□□□□□ -0.69
VEGFA-212ENST00000480614 KIF3CO14782 793 aa10.72□□□□□ -0.69
VEGFA-212ENST00000480614 INTS8Q75QN2 995 aaKnown RBP10.72□□□□□ -0.69
VEGFA-212ENST00000480614 CCDC65Q8IXS2 484 aa10.72□□□□□ -0.69
VEGFA-212ENST00000480614 NLRP3Q96P20 1036 aa10.72□□□□□ -0.69
VEGFA-212ENST00000480614 CACYBPQ9HB71 228 aaKnown RBP10.72□□□□□ -0.69
VEGFA-212ENST00000480614 ZNF830Q96NB3 372 aaPredicted RBP10.72□□□□□ -0.69
VEGFA-212ENST00000480614 EYA3Q99504 573 aa10.72□□□□□ -0.69
VEGFA-212ENST00000480614 EXOC7Q9UPT5 735 aa10.72□□□□□ -0.69
VEGFA-212ENST00000480614 ARHGAP24Q8N264 748 aa10.72□□□□□ -0.69
VEGFA-212ENST00000480614 SNX21Q969T3 373 aa10.72□□□□□ -0.69
VEGFA-212ENST00000480614 HOOK2Q96ED9 719 aa10.72□□□□□ -0.69
VEGFA-212ENST00000480614 RSPH14Q9UHP6 348 aa10.72□□□□□ -0.69
VEGFA-212ENST00000480614 NUP160Q12769 1436 aa10.72□□□□□ -0.69
VEGFA-212ENST00000480614 E7EVH7 732 aa10.72□□□□□ -0.69
VEGFA-212ENST00000480614 TNNI2P48788 182 aa10.72□□□□□ -0.69
VEGFA-212ENST00000480614 RBM26Q5T8P6 1007 aaKnown RBP10.72□□□□□ -0.69
VEGFA-212ENST00000480614 NBPF11Q86T75 865 aa10.72□□□□□ -0.69
VEGFA-212ENST00000480614 VTI1AQ96AJ9 217 aa10.72□□□□□ -0.69
VEGFA-212ENST00000480614 MBIPQ9NS73 344 aa10.72□□□□□ -0.69
VEGFA-212ENST00000480614 GRM8O00222 908 aa10.72□□□□□ -0.69
VEGFA-212ENST00000480614 CNTRLQ7Z7A1 2325 aa10.72□□□□□ -0.69
VEGFA-212ENST00000480614 Q6ZUG5 572 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms