RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 TAF7LQ5H9L4 462 aa9.01□□□□□ -0.97
COL17A1-205ENST00000480127 TSPYL6Q8N831 410 aa9.01□□□□□ -0.97
COL17A1-205ENST00000480127 MTMR14Q8NCE2 650 aa9.01□□□□□ -0.97
COL17A1-205ENST00000480127 CD99L2Q8TCZ2 262 aa9.01□□□□□ -0.97
COL17A1-205ENST00000480127 ARMC5Q96C12 935 aa9.01□□□□□ -0.97
COL17A1-205ENST00000480127 MPHOSPH8Q99549 860 aa9.01□□□□□ -0.97
COL17A1-205ENST00000480127 ANKRD2Q9GZV1 360 aa9.01□□□□□ -0.97
COL17A1-205ENST00000480127 CD209Q9NNX6 404 aa9.01□□□□□ -0.97
COL17A1-205ENST00000480127 ZBTB4Q9P1Z0 1013 aaPredicted RBP9.01□□□□□ -0.97
COL17A1-205ENST00000480127 LAMB1P07942 1786 aa9.01□□□□□ -0.97
COL17A1-205ENST00000480127 AOX1Q06278 1338 aa9.01□□□□□ -0.97
COL17A1-205ENST00000480127 IRS2Q9Y4H2 1338 aa9.01□□□□□ -0.97
COL17A1-205ENST00000480127 TESPA1A2RU30 521 aaPredicted RBP9□□□□□ -0.97
COL17A1-205ENST00000480127 UNCXA6NJT0 531 aa9□□□□□ -0.97
COL17A1-205ENST00000480127 PPP1R12BO60237 982 aaPredicted RBP9□□□□□ -0.97
COL17A1-205ENST00000480127 ITGA6P23229 1130 aa9□□□□□ -0.97
COL17A1-205ENST00000480127 FXR1P51114 621 aaKnown RBP eCLIP9□□□□□ -0.97
COL17A1-205ENST00000480127 CRHR2Q13324 411 aa9□□□□□ -0.97
COL17A1-205ENST00000480127 UBE3BQ7Z3V4 1068 aa9□□□□□ -0.97
COL17A1-205ENST00000480127 WWC1Q8IX03 1113 aa9□□□□□ -0.97
COL17A1-205ENST00000480127 ERO1AQ96HE7 468 aa9□□□□□ -0.97
COL17A1-205ENST00000480127 PTPN18Q99952 460 aa9□□□□□ -0.97
COL17A1-205ENST00000480127 PLA2G12BQ9BX93 195 aa9□□□□□ -0.97
COL17A1-205ENST00000480127 PPP2R3BQ9Y5P8 575 aa9□□□□□ -0.97
COL17A1-205ENST00000480127 RBBP6Q7Z6E9 1792 aaKnown RBP8.99□□□□□ -0.97
COL17A1-205ENST00000480127 CLRN2A0PK11 232 aa8.99□□□□□ -0.97
COL17A1-205ENST00000480127 SNAP23O00161 211 aa8.99□□□□□ -0.97
COL17A1-205ENST00000480127 USP2O75604 605 aaPredicted RBP8.99□□□□□ -0.97
COL17A1-205ENST00000480127 CSF1RP07333 972 aa8.99□□□□□ -0.97
COL17A1-205ENST00000480127 CASP7P55210 303 aa8.99□□□□□ -0.97
COL17A1-205ENST00000480127 CHRNDQ07001 517 aa8.99□□□□□ -0.97
COL17A1-205ENST00000480127 NBPF12Q5TAG4 269 aaPredicted RBP8.99□□□□□ -0.97
COL17A1-205ENST00000480127 G2E3Q7L622 706 aa8.99□□□□□ -0.97
COL17A1-205ENST00000480127 PRMT6Q96LA8 375 aaPredicted RBP8.99□□□□□ -0.97
COL17A1-205ENST00000480127 EFCC1Q9HA90 598 aa8.99□□□□□ -0.97
COL17A1-205ENST00000480127 MYH3P11055 1940 aa8.99□□□□□ -0.97
COL17A1-205ENST00000480127 SPDYE2BA6NHP3 402 aa8.98□□□□□ -0.97
COL17A1-205ENST00000480127 F8W031 263 aaPredicted RBP8.98□□□□□ -0.97
COL17A1-205ENST00000480127 TAF5LO75529 589 aa8.98□□□□□ -0.97
COL17A1-205ENST00000480127 SPDYE6P0CI01 402 aa8.98□□□□□ -0.97
COL17A1-205ENST00000480127 IL1R1P14778 569 aa8.98□□□□□ -0.97
COL17A1-205ENST00000480127 SP3Q02447 781 aa8.98□□□□□ -0.97
COL17A1-205ENST00000480127 FLIIQ13045 1269 aa8.98□□□□□ -0.97
COL17A1-205ENST00000480127 GCKRQ14397 625 aa8.98□□□□□ -0.97
COL17A1-205ENST00000480127 SUPT20HL1Q3ZLR7 823 aa8.98□□□□□ -0.97
COL17A1-205ENST00000480127 CFAP100Q494V2 611 aa8.98□□□□□ -0.97
COL17A1-205ENST00000480127 OTUD7BQ6GQQ9 843 aa8.98□□□□□ -0.97
COL17A1-205ENST00000480127 C15orf52Q6ZUT6 534 aaKnown RBP8.98□□□□□ -0.97
COL17A1-205ENST00000480127 IL16Q14005 1332 aa8.98□□□□□ -0.97
COL17A1-205ENST00000480127 MYO1BO43795 1136 aa8.97□□□□□ -0.97
COL17A1-205ENST00000480127 IREB2P48200 963 aaKnown RBP8.97□□□□□ -0.97
COL17A1-205ENST00000480127 FKBP1AP62942 108 aaKnown RBP8.97□□□□□ -0.97
COL17A1-205ENST00000480127 RASA3Q14644 834 aa8.97□□□□□ -0.97
COL17A1-205ENST00000480127 CCDC27Q2M243 656 aa8.97□□□□□ -0.97
COL17A1-205ENST00000480127 CCDC184Q52MB2 194 aa8.97□□□□□ -0.97
COL17A1-205ENST00000480127 SLC4A10Q6U841 1118 aa8.97□□□□□ -0.97
COL17A1-205ENST00000480127 ANKRD13AQ8IZ07 590 aa8.97□□□□□ -0.97
COL17A1-205ENST00000480127 HELBQ8NG08 1087 aaPredicted RBP8.97□□□□□ -0.97
COL17A1-205ENST00000480127 DNAAF4Q8WXU2 420 aa8.97□□□□□ -0.97
COL17A1-205ENST00000480127 ZNF333Q96JL9 665 aa8.97□□□□□ -0.97
COL17A1-205ENST00000480127 MS4A4AQ96JQ5 239 aa8.97□□□□□ -0.97
COL17A1-205ENST00000480127 VEZTQ9HBM0 779 aa8.97□□□□□ -0.97
COL17A1-205ENST00000480127 C9orf78Q9NZ63 289 aaPredicted RBP8.97□□□□□ -0.97
COL17A1-205ENST00000480127 COLQQ9Y215 455 aaPredicted RBP8.97□□□□□ -0.97
COL17A1-205ENST00000480127 FANCIQ9NVI1 1328 aa8.97□□□□□ -0.97
COL17A1-205ENST00000480127 HTTP42858 3142 aa8.97□□□□□ -0.97
COL17A1-205ENST00000480127 ANKRD18BA2A2Z9 1011 aa8.96□□□□□ -0.98
COL17A1-205ENST00000480127 EXOSC9Q06265 439 aaKnown RBP8.96□□□□□ -0.98
COL17A1-205ENST00000480127 WDR63Q8IWG1 891 aa8.96□□□□□ -0.98
COL17A1-205ENST00000480127 CDAN1Q8IWY9 1227 aa8.96□□□□□ -0.98
COL17A1-205ENST00000480127 CNKSR2Q8WXI2 1034 aa8.96□□□□□ -0.98
COL17A1-205ENST00000480127 OPTNQ96CV9 577 aa8.96□□□□□ -0.98
COL17A1-205ENST00000480127 TEPSINQ96N21 525 aa8.96□□□□□ -0.98
COL17A1-205ENST00000480127 TMEM106CQ9BVX2 250 aa8.96□□□□□ -0.98
COL17A1-205ENST00000480127 ELP3Q9H9T3 547 aa8.96□□□□□ -0.98
COL17A1-205ENST00000480127 JAG2Q9Y219 1238 aa8.96□□□□□ -0.98
COL17A1-205ENST00000480127 ECM29Q5VYK3 1845 aa8.96□□□□□ -0.98
COL17A1-205ENST00000480127 PLIN1O60240 522 aa8.95□□□□□ -0.98
COL17A1-205ENST00000480127 FOXO4P98177 505 aa8.95□□□□□ -0.98
COL17A1-205ENST00000480127 IFIT5Q13325 482 aaKnown RBP8.95□□□□□ -0.98
COL17A1-205ENST00000480127 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.95□□□□□ -0.98
COL17A1-205ENST00000480127 ZNF804AQ7Z570 1209 aa8.95□□□□□ -0.98
COL17A1-205ENST00000480127 LINS1Q8NG48 757 aa8.95□□□□□ -0.98
COL17A1-205ENST00000480127 BRI3BPQ8WY22 251 aa8.95□□□□□ -0.98
COL17A1-205ENST00000480127 CNNM1Q9NRU3 951 aa8.95□□□□□ -0.98
COL17A1-205ENST00000480127 ZNF70Q9UC06 446 aaPredicted RBP8.95□□□□□ -0.98
COL17A1-205ENST00000480127 PTCH2Q9Y6C5 1203 aa8.95□□□□□ -0.98
COL17A1-205ENST00000480127 A0A1B0GUL6 1792 aa8.94□□□□□ -0.98
COL17A1-205ENST00000480127 OTOFQ9HC10 1997 aa8.94□□□□□ -0.98
COL17A1-205ENST00000480127 FRAT2O75474 233 aaPredicted RBP8.94□□□□□ -0.98
COL17A1-205ENST00000480127 RBM5P52756 815 aaKnown RBP eCLIP8.94□□□□□ -0.98
COL17A1-205ENST00000480127 CCDC57Q2TAC2 916 aa8.94□□□□□ -0.98
COL17A1-205ENST00000480127 SPDYE2Q495Y8 402 aa8.94□□□□□ -0.98
COL17A1-205ENST00000480127 SLC9C1Q4G0N8 1177 aa8.94□□□□□ -0.98
COL17A1-205ENST00000480127 VPS37DQ86XT2 251 aa8.94□□□□□ -0.98
COL17A1-205ENST00000480127 FAM43AQ8N2R8 423 aa8.94□□□□□ -0.98
COL17A1-205ENST00000480127 OTUD5Q96G74 571 aa8.94□□□□□ -0.98
COL17A1-205ENST00000480127 TDRD3Q9H7E2 651 aaKnown RBP8.94□□□□□ -0.98
COL17A1-205ENST00000480127 ZFYVE28Q9HCC9 887 aa8.94□□□□□ -0.98
COL17A1-205ENST00000480127 FAM205AQ6ZU69 1335 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms