RNA–Protein interactions for RNA: ENST00000480104.5

USP11-208, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 697 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-208ENST00000480104 POTEB2H3BUK9 544 aa15.78■□□□□ 0.12
USP11-208ENST00000480104 USP2O75604 605 aaPredicted RBP15.78■□□□□ 0.12
USP11-208ENST00000480104 SGPL1O95470 568 aa15.78■□□□□ 0.12
USP11-208ENST00000480104 SYN1P17600 705 aa15.78■□□□□ 0.12
USP11-208ENST00000480104 OSBPP22059 807 aa15.78■□□□□ 0.12
USP11-208ENST00000480104 UBXN2AP68543 259 aa15.78■□□□□ 0.12
USP11-208ENST00000480104 FAM109BQ6ICB4 259 aaPredicted RBP15.78■□□□□ 0.12
USP11-208ENST00000480104 UBE2OQ9C0C9 1292 aaKnown RBP15.78■□□□□ 0.12
USP11-208ENST00000480104 TNFRSF10AO00220 468 aa15.77■□□□□ 0.12
USP11-208ENST00000480104 PSMC4P43686 418 aa15.77■□□□□ 0.12
USP11-208ENST00000480104 SUPT20HL1Q3ZLR7 823 aa15.77■□□□□ 0.12
USP11-208ENST00000480104 NBPF12Q5TAG4 269 aaPredicted RBP15.77■□□□□ 0.12
USP11-208ENST00000480104 FAM89AQ96GI7 184 aa15.77■□□□□ 0.12
USP11-208ENST00000480104 PPP2R3BQ9Y5P8 575 aa15.77■□□□□ 0.12
USP11-208ENST00000480104 MYPNQ86TC9 1320 aa15.76■□□□□ 0.11
USP11-208ENST00000480104 WDHD1O75717 1129 aaPredicted RBP15.76■□□□□ 0.11
USP11-208ENST00000480104 GTF2A2P52657 109 aa15.76■□□□□ 0.11
USP11-208ENST00000480104 KIAA0825Q8IV33 1275 aa15.76■□□□□ 0.11
USP11-208ENST00000480104 DIS3LQ8TF46 1054 aaKnown RBP15.76■□□□□ 0.11
USP11-208ENST00000480104 PAWRQ96IZ0 340 aaKnown RBP15.76■□□□□ 0.11
USP11-208ENST00000480104 SEC31BQ9NQW1 1179 aa15.76■□□□□ 0.11
USP11-208ENST00000480104 OTOFQ9HC10 1997 aa15.76■□□□□ 0.11
USP11-208ENST00000480104 CACNA1AO00555 2505 aa15.75■□□□□ 0.11
USP11-208ENST00000480104 XDHP47989 1333 aa15.75■□□□□ 0.11
USP11-208ENST00000480104 NCOR1O75376 2440 aa15.75■□□□□ 0.11
USP11-208ENST00000480104 HTATSF1O43719 755 aaKnown RBP15.75■□□□□ 0.11
USP11-208ENST00000480104 TFRCP02786 760 aaKnown RBP15.75■□□□□ 0.11
USP11-208ENST00000480104 STRIP1Q5VSL9 837 aa15.75■□□□□ 0.11
USP11-208ENST00000480104 ZNF804BA4D1E1 1349 aa15.74■□□□□ 0.11
USP11-208ENST00000480104 MMP14P50281 582 aa15.74■□□□□ 0.11
USP11-208ENST00000480104 AIMP1Q12904 312 aaKnown RBP15.74■□□□□ 0.11
USP11-208ENST00000480104 RTL5Q5HYW3 569 aaPredicted RBP15.74■□□□□ 0.11
USP11-208ENST00000480104 COPS6Q7L5N1 327 aa15.74■□□□□ 0.11
USP11-208ENST00000480104 PNISRQ8TF01 805 aaKnown RBP15.74■□□□□ 0.11
USP11-208ENST00000480104 XAGE3Q8WTP9 111 aa15.74■□□□□ 0.11
USP11-208ENST00000480104 FMNL1O95466 1100 aaPredicted RBP15.73■□□□□ 0.11
USP11-208ENST00000480104 HOXD10P28358 340 aa15.73■□□□□ 0.11
USP11-208ENST00000480104 MAP3K12Q12852 859 aa15.73■□□□□ 0.11
USP11-208ENST00000480104 DEFB118Q96PH6 123 aa15.73■□□□□ 0.11
USP11-208ENST00000480104 CDX2Q99626 313 aaPredicted RBP15.73■□□□□ 0.11
USP11-208ENST00000480104 CLRN2A0PK11 232 aa15.72■□□□□ 0.11
USP11-208ENST00000480104 BTBD19C9JJ37 291 aa15.72■□□□□ 0.11
USP11-208ENST00000480104 EIF2S2P20042 333 aaKnown RBP15.72■□□□□ 0.11
USP11-208ENST00000480104 ATP2B4P23634 1241 aa15.72■□□□□ 0.11
USP11-208ENST00000480104 PRKCZQ05513 592 aa15.72■□□□□ 0.11
USP11-208ENST00000480104 DLGAP5Q15398 846 aa15.72■□□□□ 0.11
USP11-208ENST00000480104 CC2D1BQ5T0F9 858 aaKnown RBP15.72■□□□□ 0.11
USP11-208ENST00000480104 NECAB2Q7Z6G3 386 aa15.72■□□□□ 0.11
USP11-208ENST00000480104 SLAIN1Q8ND83 568 aa15.72■□□□□ 0.11
USP11-208ENST00000480104 CPA4Q9UI42 421 aa15.72■□□□□ 0.11
USP11-208ENST00000480104 PCDHAC2Q9Y5I4 1007 aa15.72■□□□□ 0.11
USP11-208ENST00000480104 MED23Q9ULK4 1368 aa15.72■□□□□ 0.11
USP11-208ENST00000480104 IRS4O14654 1257 aaPredicted RBP15.71■□□□□ 0.11
USP11-208ENST00000480104 VGLL4Q14135 290 aa15.71■□□□□ 0.11
USP11-208ENST00000480104 C17orf99Q6UX52 265 aa15.71■□□□□ 0.11
USP11-208ENST00000480104 PPP1R3FQ6ZSY5 799 aaPredicted RBP15.71■□□□□ 0.11
USP11-208ENST00000480104 VEZTQ9HBM0 779 aa15.71■□□□□ 0.11
USP11-208ENST00000480104 COL2A1P02458 1487 aaPredicted RBP15.71■□□□□ 0.1
USP11-208ENST00000480104 ADGRA2Q96PE1 1338 aa15.7■□□□□ 0.1
USP11-208ENST00000480104 ZNF697Q5TEC3 545 aa15.7■□□□□ 0.1
USP11-208ENST00000480104 HELBQ8NG08 1087 aaPredicted RBP15.7■□□□□ 0.1
USP11-208ENST00000480104 CRISPLD2Q9H0B8 497 aa15.7■□□□□ 0.1
USP11-208ENST00000480104 ZCCHC17Q9NP64 241 aaKnown RBP15.7■□□□□ 0.1
USP11-208ENST00000480104 AOX1Q06278 1338 aa15.69■□□□□ 0.1
USP11-208ENST00000480104 FAM205AQ6ZU69 1335 aa15.69■□□□□ 0.1
USP11-208ENST00000480104 INHAP05111 366 aa15.69■□□□□ 0.1
USP11-208ENST00000480104 RASA3Q14644 834 aa15.69■□□□□ 0.1
USP11-208ENST00000480104 TJAP1Q5JTD0 557 aa15.69■□□□□ 0.1
USP11-208ENST00000480104 ATP5J2-PTCD1G3V325 749 aa15.68■□□□□ 0.1
USP11-208ENST00000480104 CETPP11597 493 aa15.68■□□□□ 0.1
USP11-208ENST00000480104 ELNP15502 786 aa15.68■□□□□ 0.1
USP11-208ENST00000480104 TTLL5Q6EMB2 1281 aa15.68■□□□□ 0.1
USP11-208ENST00000480104 PAK6Q9NQU5 681 aaPredicted RBP15.68■□□□□ 0.1
USP11-208ENST00000480104 DNAH12Q6ZR08 3092 aa15.68■□□□□ 0.1
USP11-208ENST00000480104 SYNGAP1Q96PV0 1343 aa15.68■□□□□ 0.1
USP11-208ENST00000480104 CAPN2P17655 700 aa15.67■□□□□ 0.1
USP11-208ENST00000480104 ISCA1Q9BUE6 129 aa15.67■□□□□ 0.1
USP11-208ENST00000480104 COA1Q9GZY4 146 aa15.67■□□□□ 0.1
USP11-208ENST00000480104 GABRQQ9UN88 632 aa15.67■□□□□ 0.1
USP11-208ENST00000480104 SPDYE2BA6NHP3 402 aa15.66■□□□□ 0.1
USP11-208ENST00000480104 MYO1BO43795 1136 aa15.66■□□□□ 0.1
USP11-208ENST00000480104 ADCY3O60266 1144 aa15.66■□□□□ 0.1
USP11-208ENST00000480104 SPDYE6P0CI01 402 aa15.66■□□□□ 0.1
USP11-208ENST00000480104 CDAN1Q8IWY9 1227 aa15.66■□□□□ 0.1
USP11-208ENST00000480104 MTMR14Q8NCE2 650 aa15.66■□□□□ 0.1
USP11-208ENST00000480104 MYLIPQ8WY64 445 aa15.66■□□□□ 0.1
USP11-208ENST00000480104 CSADQ9Y600 493 aa15.66■□□□□ 0.1
USP11-208ENST00000480104 SPDYE5A6NIY4 337 aa15.65■□□□□ 0.1
USP11-208ENST00000480104 U2AF1L5P0DN76 240 aaPredicted RBP15.65■□□□□ 0.1
USP11-208ENST00000480104 GTF2IP78347 998 aa15.65■□□□□ 0.1
USP11-208ENST00000480104 MAP3K9P80192 1104 aa15.65■□□□□ 0.1
USP11-208ENST00000480104 U2AF1Q01081 240 aaKnown RBP eCLIP15.65■□□□□ 0.1
USP11-208ENST00000480104 TXNRD3Q86VQ6 643 aa15.65■□□□□ 0.1
USP11-208ENST00000480104 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.65■□□□□ 0.1
USP11-208ENST00000480104 SNX27Q96L92 541 aa15.65■□□□□ 0.1
USP11-208ENST00000480104 CCDC85AQ96PX6 553 aaPredicted RBP15.65■□□□□ 0.1
USP11-208ENST00000480104 FCGRTP55899 365 aa15.64■□□□□ 0.09
USP11-208ENST00000480104 MDM2Q00987 491 aaPredicted RBP15.64■□□□□ 0.09
USP11-208ENST00000480104 SNAPC2Q13487 334 aa15.64■□□□□ 0.09
USP11-208ENST00000480104 CFAP100Q494V2 611 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms