RNA–Protein interactions for RNA: ENST00000480067.1

CLDN11-205, Transcript of claudin 11, humanhuman

TSL 1 (best)

Gene CLDN11, Length 1,589 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-205ENST00000480067 TSHZ3Q63HK5 1081 aa13.66□□□□□ -0.22
CLDN11-205ENST00000480067 STAP2Q9UGK3 403 aa13.66□□□□□ -0.22
CLDN11-205ENST00000480067 A0A1B0GUL6 1792 aa13.65□□□□□ -0.22
CLDN11-205ENST00000480067 GLRX3O76003 335 aaKnown RBP13.65□□□□□ -0.22
CLDN11-205ENST00000480067 PDE4AP27815 886 aa13.65□□□□□ -0.22
CLDN11-205ENST00000480067 MCAMP43121 646 aa13.65□□□□□ -0.22
CLDN11-205ENST00000480067 CXCL9Q07325 125 aa13.65□□□□□ -0.22
CLDN11-205ENST00000480067 STRIP1Q5VSL9 837 aa13.65□□□□□ -0.22
CLDN11-205ENST00000480067 CIAPIN1Q6FI81 312 aa13.65□□□□□ -0.22
CLDN11-205ENST00000480067 PLEKHM2Q8IWE5 1019 aa13.65□□□□□ -0.22
CLDN11-205ENST00000480067 WDR66Q8TBY9 1149 aa13.65□□□□□ -0.22
CLDN11-205ENST00000480067 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.65□□□□□ -0.22
CLDN11-205ENST00000480067 BOLA2Q9H3K6 86 aa13.65□□□□□ -0.22
CLDN11-205ENST00000480067 SNRKQ9NRH2 765 aa13.65□□□□□ -0.22
CLDN11-205ENST00000480067 HMG20BQ9P0W2 317 aa13.65□□□□□ -0.22
CLDN11-205ENST00000480067 JAG2Q9Y219 1238 aa13.65□□□□□ -0.22
CLDN11-205ENST00000480067 ZBTB22O15209 634 aa13.64□□□□□ -0.23
CLDN11-205ENST00000480067 SCARF1Q14162 830 aa13.64□□□□□ -0.23
CLDN11-205ENST00000480067 DPY19L2Q6NUT2 758 aa13.64□□□□□ -0.23
CLDN11-205ENST00000480067 TBC1D22AQ8WUA7 517 aa13.64□□□□□ -0.23
CLDN11-205ENST00000480067 SALL3Q9BXA9 1300 aa13.64□□□□□ -0.23
CLDN11-205ENST00000480067 PSMD14O00487 310 aa13.63□□□□□ -0.23
CLDN11-205ENST00000480067 PI16Q6UXB8 463 aa13.63□□□□□ -0.23
CLDN11-205ENST00000480067 DNAJC2Q99543 621 aaKnown RBP13.63□□□□□ -0.23
CLDN11-205ENST00000480067 HAUS7Q99871 368 aa13.63□□□□□ -0.23
CLDN11-205ENST00000480067 OSBPL3Q9H4L5 887 aa13.63□□□□□ -0.23
CLDN11-205ENST00000480067 GJA3Q9Y6H8 435 aa13.63□□□□□ -0.23
CLDN11-205ENST00000480067 PDS5AQ29RF7 1337 aaKnown RBP13.63□□□□□ -0.23
CLDN11-205ENST00000480067 FAM205AQ6ZU69 1335 aa13.63□□□□□ -0.23
CLDN11-205ENST00000480067 ZC3H4Q9UPT8 1303 aaKnown RBP13.63□□□□□ -0.23
CLDN11-205ENST00000480067 COL4A5P29400 1685 aa13.63□□□□□ -0.23
CLDN11-205ENST00000480067 VIL1P09327 827 aaKnown RBP13.62□□□□□ -0.23
CLDN11-205ENST00000480067 ZAP70P43403 619 aa13.62□□□□□ -0.23
CLDN11-205ENST00000480067 MFSD14BQ5SR56 506 aa13.62□□□□□ -0.23
CLDN11-205ENST00000480067 DACT2Q5SW24 774 aa13.62□□□□□ -0.23
CLDN11-205ENST00000480067 ZGPATQ8N5A5 531 aaKnown RBP13.62□□□□□ -0.23
CLDN11-205ENST00000480067 PI4K2BQ8TCG2 481 aa13.62□□□□□ -0.23
CLDN11-205ENST00000480067 ABCF2Q9UG63 623 aa13.62□□□□□ -0.23
CLDN11-205ENST00000480067 AOX1Q06278 1338 aa13.62□□□□□ -0.23
CLDN11-205ENST00000480067 ZNF541Q9H0D2 1346 aa13.62□□□□□ -0.23
CLDN11-205ENST00000480067 RGS3P49796 1198 aa13.62□□□□□ -0.23
CLDN11-205ENST00000480067 RSBN1LQ6PCB5 846 aaPredicted RBP13.62□□□□□ -0.23
CLDN11-205ENST00000480067 TBC1D9Q6ZT07 1266 aa13.62□□□□□ -0.23
CLDN11-205ENST00000480067 SKAP1Q86WV1 359 aa13.62□□□□□ -0.23
CLDN11-205ENST00000480067 GPC2Q8N158 579 aa13.62□□□□□ -0.23
CLDN11-205ENST00000480067 MXD3Q9BW11 206 aa13.62□□□□□ -0.23
CLDN11-205ENST00000480067 NDUFB9Q9Y6M9 179 aa13.62□□□□□ -0.23
CLDN11-205ENST00000480067 GOLIM4O00461 696 aa13.61□□□□□ -0.23
CLDN11-205ENST00000480067 CYP2E1P05181 493 aaPredicted RBP13.61□□□□□ -0.23
CLDN11-205ENST00000480067 FKBP1AP62942 108 aaKnown RBP13.61□□□□□ -0.23
CLDN11-205ENST00000480067 TTF1Q15361 905 aaPredicted RBP13.61□□□□□ -0.23
CLDN11-205ENST00000480067 SPTY2D1Q68D10 685 aaPredicted RBP13.61□□□□□ -0.23
CLDN11-205ENST00000480067 PAG1Q9NWQ8 432 aa13.61□□□□□ -0.23
CLDN11-205ENST00000480067 LRP2BPQ9P2M1 347 aa13.61□□□□□ -0.23
CLDN11-205ENST00000480067 ZBTB12Q9Y330 459 aaPredicted RBP13.61□□□□□ -0.23
CLDN11-205ENST00000480067 ARAP2Q8WZ64 1704 aa13.61□□□□□ -0.23
CLDN11-205ENST00000480067 MYO3BQ8WXR4 1341 aa13.6□□□□□ -0.23
CLDN11-205ENST00000480067 SALL1Q9NSC2 1324 aa13.6□□□□□ -0.23
CLDN11-205ENST00000480067 DDNO94850 711 aaPredicted RBP13.6□□□□□ -0.23
CLDN11-205ENST00000480067 MAP4K4O95819 1239 aaPredicted RBP13.6□□□□□ -0.23
CLDN11-205ENST00000480067 AGBL3Q8NEM8 1001 aa13.6□□□□□ -0.23
CLDN11-205ENST00000480067 SUGT1Q9Y2Z0 365 aa13.6□□□□□ -0.23
CLDN11-205ENST00000480067 SBF1O95248 1867 aa13.6□□□□□ -0.23
CLDN11-205ENST00000480067 GLTPD2A6NH11 291 aa13.59□□□□□ -0.23
CLDN11-205ENST00000480067 TRIM6-TRIM34B2RNG4 842 aa13.59□□□□□ -0.23
CLDN11-205ENST00000480067 LDHBP07195 334 aaKnown RBP13.59□□□□□ -0.23
CLDN11-205ENST00000480067 RPS12P25398 132 aaKnown RBP13.59□□□□□ -0.23
CLDN11-205ENST00000480067 ERICH6Q7L0X2 663 aa13.59□□□□□ -0.23
CLDN11-205ENST00000480067 OGFOD1Q8N543 542 aa13.59□□□□□ -0.23
CLDN11-205ENST00000480067 CERS5Q8N5B7 392 aa13.59□□□□□ -0.23
CLDN11-205ENST00000480067 EDC3Q96F86 508 aaKnown RBP13.59□□□□□ -0.23
CLDN11-205ENST00000480067 ANTXR1Q9H6X2 564 aa13.59□□□□□ -0.23
CLDN11-205ENST00000480067 COL1A1P02452 1464 aaPredicted RBP13.59□□□□□ -0.23
CLDN11-205ENST00000480067 F8W031 263 aaPredicted RBP13.58□□□□□ -0.23
CLDN11-205ENST00000480067 IDH1O75874 414 aaKnown RBP13.58□□□□□ -0.23
CLDN11-205ENST00000480067 GMPSP49915 693 aaPredicted RBP13.58□□□□□ -0.23
CLDN11-205ENST00000480067 MAP3K12Q12852 859 aa13.58□□□□□ -0.23
CLDN11-205ENST00000480067 TTC22Q5TAA0 569 aa13.58□□□□□ -0.23
CLDN11-205ENST00000480067 KIAA0825Q8IV33 1275 aa13.58□□□□□ -0.23
CLDN11-205ENST00000480067 DPF2Q92785 391 aa13.58□□□□□ -0.23
CLDN11-205ENST00000480067 PIH1D3Q9NQM4 214 aaKnown RBP13.58□□□□□ -0.23
CLDN11-205ENST00000480067 RAI14Q9P0K7 980 aa13.58□□□□□ -0.23
CLDN11-205ENST00000480067 CCDC88AQ3V6T2 1871 aa13.58□□□□□ -0.24
CLDN11-205ENST00000480067 USP17L8P0C7I0 530 aa13.58□□□□□ -0.24
CLDN11-205ENST00000480067 PRDX5P30044 214 aa13.58□□□□□ -0.24
CLDN11-205ENST00000480067 DZIP1Q86YF9 867 aaKnown RBP13.58□□□□□ -0.24
CLDN11-205ENST00000480067 RILPL2Q969X0 211 aa13.58□□□□□ -0.24
CLDN11-205ENST00000480067 EVI5LQ96CN4 794 aa13.58□□□□□ -0.24
CLDN11-205ENST00000480067 HDAC9Q9UKV0 1011 aa13.58□□□□□ -0.24
CLDN11-205ENST00000480067 TTF2Q9UNY4 1162 aaKnown RBP13.58□□□□□ -0.24
CLDN11-205ENST00000480067 CHD4Q14839 1912 aa13.57□□□□□ -0.24
CLDN11-205ENST00000480067 MMP14P50281 582 aa13.57□□□□□ -0.24
CLDN11-205ENST00000480067 GRIK5Q16478 980 aa13.57□□□□□ -0.24
CLDN11-205ENST00000480067 CNTROBQ8N137 903 aa13.57□□□□□ -0.24
CLDN11-205ENST00000480067 GMLQ99445 158 aa13.57□□□□□ -0.24
CLDN11-205ENST00000480067 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.57□□□□□ -0.24
CLDN11-205ENST00000480067 CNOT7Q9UIV1 285 aaKnown RBP13.57□□□□□ -0.24
CLDN11-205ENST00000480067 MAST3O60307 1309 aa13.56□□□□□ -0.24
CLDN11-205ENST00000480067 DICER1Q9UPY3 1922 aaKnown RBP13.56□□□□□ -0.24
CLDN11-205ENST00000480067 H7C1D1 291 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms