RNA–Protein interactions for RNA: ENST00000480022.1

CHD6-208, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 2

Gene CHD6, Length 2,829 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-208ENST00000480022 SMARCC1Q92922 1105 aaPredicted RBP12.65□□□□□ -0.38
CHD6-208ENST00000480022 ADAM21Q9UKJ8 722 aa12.65□□□□□ -0.38
CHD6-208ENST00000480022 KCPQ6ZWJ8 1503 aa12.65□□□□□ -0.38
CHD6-208ENST00000480022 RUFY3Q7L099 469 aa12.65□□□□□ -0.38
CHD6-208ENST00000480022 CCDC91Q7Z6B0 441 aa12.65□□□□□ -0.38
CHD6-208ENST00000480022 C8orf58Q8NAV2 365 aa12.65□□□□□ -0.38
CHD6-208ENST00000480022 ZNF526Q8TF50 670 aaPredicted RBP12.65□□□□□ -0.38
CHD6-208ENST00000480022 USP16Q9Y5T5 823 aa12.65□□□□□ -0.38
CHD6-208ENST00000480022 SASH3O75995 380 aa12.64□□□□□ -0.39
CHD6-208ENST00000480022 GSDMDP57764 484 aa12.64□□□□□ -0.39
CHD6-208ENST00000480022 SART3Q15020 963 aaKnown RBP12.64□□□□□ -0.39
CHD6-208ENST00000480022 TSHZ3Q63HK5 1081 aa12.64□□□□□ -0.39
CHD6-208ENST00000480022 MNS1Q8NEH6 495 aa12.64□□□□□ -0.39
CHD6-208ENST00000480022 FMNL2Q96PY5 1086 aa12.64□□□□□ -0.39
CHD6-208ENST00000480022 KDM3BQ7LBC6 1761 aa12.64□□□□□ -0.39
CHD6-208ENST00000480022 HEG1Q9ULI3 1381 aa12.64□□□□□ -0.39
CHD6-208ENST00000480022 APBA3O96018 575 aa12.64□□□□□ -0.39
CHD6-208ENST00000480022 CCDC158Q5M9N0 1113 aa12.64□□□□□ -0.39
CHD6-208ENST00000480022 GORABQ5T7V8 394 aa12.64□□□□□ -0.39
CHD6-208ENST00000480022 PPP1R13BQ96KQ4 1090 aa12.64□□□□□ -0.39
CHD6-208ENST00000480022 SLC4A9Q96Q91 983 aa12.64□□□□□ -0.39
CHD6-208ENST00000480022 LARP6Q9BRS8 491 aaKnown RBP12.64□□□□□ -0.39
CHD6-208ENST00000480022 SRRTQ9BXP5 876 aaKnown RBP12.64□□□□□ -0.39
CHD6-208ENST00000480022 TUBGCP6Q96RT7 1819 aa12.63□□□□□ -0.39
CHD6-208ENST00000480022 IQCB1Q15051 598 aa12.63□□□□□ -0.39
CHD6-208ENST00000480022 CC2D1AQ6P1N0 951 aaPredicted RBP12.63□□□□□ -0.39
CHD6-208ENST00000480022 PPM1EQ8WY54 764 aa12.63□□□□□ -0.39
CHD6-208ENST00000480022 CCDC34Q96HJ3 373 aa12.63□□□□□ -0.39
CHD6-208ENST00000480022 BTAF1O14981 1849 aa12.63□□□□□ -0.39
CHD6-208ENST00000480022 PRAMEF22A3QJZ6 481 aa12.63□□□□□ -0.39
CHD6-208ENST00000480022 PSDA5PKW4 1024 aaPredicted RBP12.63□□□□□ -0.39
CHD6-208ENST00000480022 GIGYF1O75420 1035 aaPredicted RBP12.63□□□□□ -0.39
CHD6-208ENST00000480022 E4F1Q66K89 784 aaPredicted RBP12.63□□□□□ -0.39
CHD6-208ENST00000480022 EP400NLQ6ZTU2 488 aa12.63□□□□□ -0.39
CHD6-208ENST00000480022 SUGP1Q8IWZ8 645 aaKnown RBP12.63□□□□□ -0.39
CHD6-208ENST00000480022 SALL3Q9BXA9 1300 aa12.63□□□□□ -0.39
CHD6-208ENST00000480022 LOC102724428A0A0B4J2F2 783 aa12.62□□□□□ -0.39
CHD6-208ENST00000480022 EFCAB8A8MWE9 144 aa12.62□□□□□ -0.39
CHD6-208ENST00000480022 SIK1P57059 783 aa12.62□□□□□ -0.39
CHD6-208ENST00000480022 CCDC83Q8IWF9 413 aa12.62□□□□□ -0.39
CHD6-208ENST00000480022 EIF3CLB5ME19 914 aaKnown RBP12.62□□□□□ -0.39
CHD6-208ENST00000480022 TADA3O75528 432 aa12.62□□□□□ -0.39
CHD6-208ENST00000480022 SWT1Q5T5J6 900 aaKnown RBP12.62□□□□□ -0.39
CHD6-208ENST00000480022 EIF3CQ99613 913 aaKnown RBP12.62□□□□□ -0.39
CHD6-208ENST00000480022 CXorf56Q9H5V9 222 aa12.62□□□□□ -0.39
CHD6-208ENST00000480022 SNX14Q9Y5W7 946 aa12.62□□□□□ -0.39
CHD6-208ENST00000480022 PLSCR1O15162 318 aa12.61□□□□□ -0.39
CHD6-208ENST00000480022 SNRPA1P09661 255 aaKnown RBP12.61□□□□□ -0.39
CHD6-208ENST00000480022 SCAND2PQ9GZW5 306 aaPredicted RBP12.61□□□□□ -0.39
CHD6-208ENST00000480022 DONSONQ9NYP3 566 aa12.61□□□□□ -0.39
CHD6-208ENST00000480022 MEIS3Q99687 375 aa12.61□□□□□ -0.39
CHD6-208ENST00000480022 UBR2Q8IWV8 1755 aa12.61□□□□□ -0.39
CHD6-208ENST00000480022 PHLPP2Q6ZVD8 1323 aa12.61□□□□□ -0.39
CHD6-208ENST00000480022 LARGE1O95461 756 aa12.61□□□□□ -0.39
CHD6-208ENST00000480022 KCNQ4P56696 695 aa12.61□□□□□ -0.39
CHD6-208ENST00000480022 MCTP2Q6DN12 878 aa12.61□□□□□ -0.39
CHD6-208ENST00000480022 ARFGAP3Q9NP61 516 aa12.61□□□□□ -0.39
CHD6-208ENST00000480022 TNS1Q9HBL0 1735 aaKnown RBP12.6□□□□□ -0.39
CHD6-208ENST00000480022 BECN2A8MW95 431 aa12.6□□□□□ -0.39
CHD6-208ENST00000480022 ATP6V1AP38606 617 aa12.6□□□□□ -0.39
CHD6-208ENST00000480022 GSCP56915 257 aaPredicted RBP12.6□□□□□ -0.39
CHD6-208ENST00000480022 OS9Q13438 667 aaPredicted RBP12.6□□□□□ -0.39
CHD6-208ENST00000480022 E2F4Q16254 413 aa12.6□□□□□ -0.39
CHD6-208ENST00000480022 HOMER1Q86YM7 354 aa12.6□□□□□ -0.39
CHD6-208ENST00000480022 SPATA32Q96LK8 384 aa12.6□□□□□ -0.39
CHD6-208ENST00000480022 OSBPL5Q9H0X9 879 aaPredicted RBP12.6□□□□□ -0.39
CHD6-208ENST00000480022 NR1I2O75469 434 aa12.6□□□□□ -0.39
CHD6-208ENST00000480022 RPS6KA5O75582 802 aa12.6□□□□□ -0.39
CHD6-208ENST00000480022 KCNJ6P48051 423 aa12.6□□□□□ -0.39
CHD6-208ENST00000480022 ETF1P62495 437 aaKnown RBP12.6□□□□□ -0.39
CHD6-208ENST00000480022 SF3B2Q13435 895 aaKnown RBP12.6□□□□□ -0.39
CHD6-208ENST00000480022 ITPK1Q13572 414 aa12.6□□□□□ -0.39
CHD6-208ENST00000480022 DNAJC10Q8IXB1 793 aa12.6□□□□□ -0.39
CHD6-208ENST00000480022 PROM2Q8N271 834 aa12.6□□□□□ -0.39
CHD6-208ENST00000480022 CCNL1Q9UK58 526 aaPredicted RBP12.6□□□□□ -0.39
CHD6-208ENST00000480022 KAT6BQ8WYB5 2073 aa12.59□□□□□ -0.39
CHD6-208ENST00000480022 HOXB7P09629 217 aa12.59□□□□□ -0.39
CHD6-208ENST00000480022 EVCP57679 992 aa12.59□□□□□ -0.39
CHD6-208ENST00000480022 CORO7P57737 925 aa12.59□□□□□ -0.39
CHD6-208ENST00000480022 CCDC125Q86Z20 511 aa12.59□□□□□ -0.39
CHD6-208ENST00000480022 ZSCAN31Q96LW9 406 aaPredicted RBP12.59□□□□□ -0.39
CHD6-208ENST00000480022 IL25Q9H293 177 aa12.59□□□□□ -0.39
CHD6-208ENST00000480022 SH2B1Q9NRF2 756 aaPredicted RBP12.59□□□□□ -0.39
CHD6-208ENST00000480022 IMPACTQ9P2X3 320 aa12.59□□□□□ -0.39
CHD6-208ENST00000480022 DNAI1Q9UI46 699 aa12.59□□□□□ -0.39
CHD6-208ENST00000480022 NRDCO43847 1150 aa12.59□□□□□ -0.39
CHD6-208ENST00000480022 KIF1CO43896 1103 aaKnown RBP12.59□□□□□ -0.39
CHD6-208ENST00000480022 LRRFIP1Q32MZ4 808 aaKnown RBP12.59□□□□□ -0.39
CHD6-208ENST00000480022 LARP1BQ659C4 914 aaKnown RBP12.59□□□□□ -0.39
CHD6-208ENST00000480022 MMS22LQ6ZRQ5 1243 aa12.59□□□□□ -0.39
CHD6-208ENST00000480022 C11orf57Q6ZUT1 292 aaPredicted RBP12.59□□□□□ -0.39
CHD6-208ENST00000480022 FERMT3Q86UX7 667 aa12.59□□□□□ -0.39
CHD6-208ENST00000480022 GPR161Q8N6U8 529 aaKnown RBP12.59□□□□□ -0.39
CHD6-208ENST00000480022 BICD2Q8TD16 824 aa12.59□□□□□ -0.39
CHD6-208ENST00000480022 UPF1Q92900 1129 aaKnown RBP eCLIP12.59□□□□□ -0.39
CHD6-208ENST00000480022 CARD6Q9BX69 1037 aa12.59□□□□□ -0.39
CHD6-208ENST00000480022 FUT8Q9BYC5 575 aa12.59□□□□□ -0.39
CHD6-208ENST00000480022 LRRC4BQ9NT99 713 aa12.59□□□□□ -0.39
CHD6-208ENST00000480022 EN1Q05925 392 aaPredicted RBP12.58□□□□□ -0.4
CHD6-208ENST00000480022 STX1AQ16623 288 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms