RNA–Protein interactions for RNA: ENST00000479656.5

APTX-223, Transcript of aprataxin, human

TSL 1 (best)

Gene APTX, Length 1,881 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
APTX-223	ENST00000479656	RIMBP2	O15034	1052 aa		13.5	□□□□□ -0.25
APTX-223	ENST00000479656	ADD2	P35612	726 aa		13.5	□□□□□ -0.25
APTX-223	ENST00000479656	ZSCAN25	Q6NSZ9	544 aa		13.5	□□□□□ -0.25
APTX-223	ENST00000479656	ZNF804A	Q7Z570	1209 aa		13.5	□□□□□ -0.25
APTX-223	ENST00000479656	TDRD7	Q8NHU6	1098 aa	Known RBP	13.5	□□□□□ -0.25
APTX-223	ENST00000479656	OSBP2	Q969R2	916 aa		13.5	□□□□□ -0.25
APTX-223	ENST00000479656	LRP2BP	Q9P2M1	347 aa		13.5	□□□□□ -0.25
APTX-223	ENST00000479656	WWC3	Q9ULE0	1092 aa		13.5	□□□□□ -0.25
APTX-223	ENST00000479656	MED23	Q9ULK4	1368 aa		13.49	□□□□□ -0.25
APTX-223	ENST00000479656	SLX4	Q8IY92	1834 aa		13.49	□□□□□ -0.25
APTX-223	ENST00000479656	EPB41L2	O43491	1005 aa	Known RBP	13.49	□□□□□ -0.25
APTX-223	ENST00000479656	MAP3K12	Q12852	859 aa		13.49	□□□□□ -0.25
APTX-223	ENST00000479656	CHAF1A	Q13111	956 aa	Predicted RBP	13.49	□□□□□ -0.25
APTX-223	ENST00000479656	TTLL6	Q8N841	843 aa		13.49	□□□□□ -0.25
APTX-223	ENST00000479656	C7orf43	Q8WVR3	580 aa		13.49	□□□□□ -0.25
APTX-223	ENST00000479656	SGIP1	Q9BQI5	828 aa		13.49	□□□□□ -0.25
APTX-223	ENST00000479656	CD209	Q9NNX6	404 aa		13.49	□□□□□ -0.25
APTX-223	ENST00000479656	PPP1R1B	Q9UD71	204 aa	Predicted RBP	13.49	□□□□□ -0.25
APTX-223	ENST00000479656	JAG2	Q9Y219	1238 aa		13.49	□□□□□ -0.25
APTX-223	ENST00000479656	LRRC37A	A6NMS7	1700 aa		13.49	□□□□□ -0.25
APTX-223	ENST00000479656	COL1A1	P02452	1464 aa	Predicted RBP	13.49	□□□□□ -0.25
APTX-223	ENST00000479656	CCDC171	Q6TFL3	1326 aa		13.49	□□□□□ -0.25
APTX-223	ENST00000479656		M0R2C6	588 aa		13.48	□□□□□ -0.25
APTX-223	ENST00000479656	PDE6A	P16499	860 aa		13.48	□□□□□ -0.25
APTX-223	ENST00000479656	TGFB2	P61812	414 aa		13.48	□□□□□ -0.25
APTX-223	ENST00000479656	MAGEB6	Q8N7X4	407 aa		13.48	□□□□□ -0.25
APTX-223	ENST00000479656	APPBP2	Q92624	585 aa		13.48	□□□□□ -0.25
APTX-223	ENST00000479656	ZC3H12C	Q9C0D7	883 aa	Known RBP	13.48	□□□□□ -0.25
APTX-223	ENST00000479656	PUS7L	Q9H0K6	701 aa	Known RBP	13.48	□□□□□ -0.25
APTX-223	ENST00000479656	CACNA1S	Q13698	1873 aa		13.48	□□□□□ -0.25
APTX-223	ENST00000479656	MAST3	O60307	1309 aa		13.48	□□□□□ -0.25
APTX-223	ENST00000479656	ZNF532	Q9HCE3	1301 aa		13.48	□□□□□ -0.25
APTX-223	ENST00000479656	C21orf2	O43822	256 aa		13.48	□□□□□ -0.25
APTX-223	ENST00000479656	MCC	P23508	829 aa		13.48	□□□□□ -0.25
APTX-223	ENST00000479656	HSPA4	P34932	840 aa		13.48	□□□□□ -0.25
APTX-223	ENST00000479656	UBE3C	Q15386	1083 aa		13.48	□□□□□ -0.25
APTX-223	ENST00000479656	MAP4K1	Q92918	833 aa		13.48	□□□□□ -0.25
APTX-223	ENST00000479656	IPO9	Q96P70	1041 aa	Known RBP	13.48	□□□□□ -0.25
APTX-223	ENST00000479656	PALD1	Q9ULE6	856 aa		13.48	□□□□□ -0.25
APTX-223	ENST00000479656	MYO5A	Q9Y4I1	1855 aa	Known RBP	13.47	□□□□□ -0.25
APTX-223	ENST00000479656	TCRBV5S4A2T	A0A5A2	114 aa		13.47	□□□□□ -0.25
APTX-223	ENST00000479656	ZBTB22	O15209	634 aa		13.47	□□□□□ -0.25
APTX-223	ENST00000479656	PTGER2	P43116	358 aa		13.47	□□□□□ -0.25
APTX-223	ENST00000479656	KLHL34	Q8N239	644 aa		13.47	□□□□□ -0.25
APTX-223	ENST00000479656	RAI14	Q9P0K7	980 aa		13.47	□□□□□ -0.25
APTX-223	ENST00000479656	PDS5A	Q29RF7	1337 aa	Known RBP	13.47	□□□□□ -0.25
APTX-223	ENST00000479656	LTBP1	Q14766	1721 aa		13.46	□□□□□ -0.25
APTX-223	ENST00000479656	IL1R1	P14778	569 aa		13.46	□□□□□ -0.25
APTX-223	ENST00000479656	DDRGK1	Q96HY6	314 aa		13.46	□□□□□ -0.25
APTX-223	ENST00000479656	RBM8A	Q9Y5S9	174 aa	Known RBP	13.46	□□□□□ -0.25
APTX-223	ENST00000479656	NECTIN1	Q15223	517 aa		13.46	□□□□□ -0.26
APTX-223	ENST00000479656	DOK7	Q18PE1	504 aa		13.46	□□□□□ -0.26
APTX-223	ENST00000479656	VPS53	Q5VIR6	699 aa		13.46	□□□□□ -0.26
APTX-223	ENST00000479656	ERICH6	Q7L0X2	663 aa		13.46	□□□□□ -0.26
APTX-223	ENST00000479656	EYA3	Q99504	573 aa		13.46	□□□□□ -0.26
APTX-223	ENST00000479656	PIM2	Q9P1W9	311 aa		13.46	□□□□□ -0.26
APTX-223	ENST00000479656	DUOX1	Q9NRD9	1551 aa		13.45	□□□□□ -0.26
APTX-223	ENST00000479656	CC2D2B	Q6DHV5	1058 aa		13.45	□□□□□ -0.26
APTX-223	ENST00000479656	WDR66	Q8TBY9	1149 aa		13.45	□□□□□ -0.26
APTX-223	ENST00000479656	COA1	Q9GZY4	146 aa		13.45	□□□□□ -0.26
APTX-223	ENST00000479656	KIF13B	Q9NQT8	1826 aa		13.44	□□□□□ -0.26
APTX-223	ENST00000479656	GPAA1	O43292	621 aa		13.44	□□□□□ -0.26
APTX-223	ENST00000479656	HSPD1	P10809	573 aa	Known RBP	13.44	□□□□□ -0.26
APTX-223	ENST00000479656	CYP7A1	P22680	504 aa		13.44	□□□□□ -0.26
APTX-223	ENST00000479656	PRDX5	P30044	214 aa		13.44	□□□□□ -0.26
APTX-223	ENST00000479656	RASEF	Q8IZ41	740 aa		13.44	□□□□□ -0.26
APTX-223	ENST00000479656	RTFDC1	Q9BY42	306 aa	Predicted RBP	13.44	□□□□□ -0.26
APTX-223	ENST00000479656	SNX14	Q9Y5W7	946 aa		13.44	□□□□□ -0.26
APTX-223	ENST00000479656		G3V3G9	751 aa		13.44	□□□□□ -0.26
APTX-223	ENST00000479656	SLC4A3	P48751	1232 aa		13.44	□□□□□ -0.26
APTX-223	ENST00000479656	ANAPC15	P60006	121 aa		13.44	□□□□□ -0.26
APTX-223	ENST00000479656	DCAF8	Q5TAQ9	597 aa		13.44	□□□□□ -0.26
APTX-223	ENST00000479656	POTED	Q86YR6	584 aa		13.44	□□□□□ -0.26
APTX-223	ENST00000479656	ZNF384	Q8TF68	577 aa		13.44	□□□□□ -0.26
APTX-223	ENST00000479656	DSCC1	Q9BVC3	393 aa		13.44	□□□□□ -0.26
APTX-223	ENST00000479656	CD2AP	Q9Y5K6	639 aa		13.44	□□□□□ -0.26
APTX-223	ENST00000479656	MYH7	P12883	1935 aa		13.44	□□□□□ -0.26
APTX-223	ENST00000479656	DOCK2	Q92608	1830 aa		13.43	□□□□□ -0.26
APTX-223	ENST00000479656	SLC27A2	O14975	620 aa		13.43	□□□□□ -0.26
APTX-223	ENST00000479656	GTF2I	P78347	998 aa		13.43	□□□□□ -0.26
APTX-223	ENST00000479656	MECOM	Q03112	1051 aa		13.43	□□□□□ -0.26
APTX-223	ENST00000479656	CREB3L3	Q68CJ9	461 aa		13.43	□□□□□ -0.26
APTX-223	ENST00000479656	SPTY2D1	Q68D10	685 aa	Predicted RBP	13.43	□□□□□ -0.26
APTX-223	ENST00000479656	NAA16	Q6N069	864 aa	Predicted RBP	13.43	□□□□□ -0.26
APTX-223	ENST00000479656	ADGRA1	Q86SQ6	560 aa		13.43	□□□□□ -0.26
APTX-223	ENST00000479656	ZGPAT	Q8N5A5	531 aa	Known RBP	13.43	□□□□□ -0.26
APTX-223	ENST00000479656	AIDA	Q96BJ3	306 aa		13.43	□□□□□ -0.26
APTX-223	ENST00000479656	NSUN4	Q96CB9	384 aa	Known RBP	13.43	□□□□□ -0.26
APTX-223	ENST00000479656		U3KPZ7	1027 aa	Predicted RBP	13.43	□□□□□ -0.26
APTX-223	ENST00000479656	DLEC1	Q9Y238	1755 aa		13.43	□□□□□ -0.26
APTX-223	ENST00000479656	SALL1	Q9NSC2	1324 aa		13.43	□□□□□ -0.26
APTX-223	ENST00000479656	RABEP1	Q15276	862 aa		13.42	□□□□□ -0.26
APTX-223	ENST00000479656	GRIK5	Q16478	980 aa		13.42	□□□□□ -0.26
APTX-223	ENST00000479656	CCDC93	Q567U6	631 aa		13.42	□□□□□ -0.26
APTX-223	ENST00000479656	MIGA1	Q8NAN2	632 aa		13.42	□□□□□ -0.26
APTX-223	ENST00000479656	KCNB2	Q92953	911 aa		13.42	□□□□□ -0.26
APTX-223	ENST00000479656	STRBP	Q96SI9	672 aa	Known RBP	13.42	□□□□□ -0.26
APTX-223	ENST00000479656	ARMT1	Q9H993	441 aa		13.42	□□□□□ -0.26
APTX-223	ENST00000479656	DBNDD1	Q9H9R9	158 aa		13.42	□□□□□ -0.26
APTX-223	ENST00000479656	SPON1	Q9HCB6	807 aa		13.42	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms