RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 VIRMAQ69YN4 1812 aaKnown RBP8.07□□□□□ -1.12
SF3B1-209ENST00000479532 KAT6BQ8WYB5 2073 aa8.07□□□□□ -1.12
SF3B1-209ENST00000479532 MAP3K5Q99683 1374 aa8.07□□□□□ -1.12
SF3B1-209ENST00000479532 DOT1LQ8TEK3 1739 aa8.06□□□□□ -1.12
SF3B1-209ENST00000479532 BCL9O00512 1426 aa8.06□□□□□ -1.12
SF3B1-209ENST00000479532 DLG5Q8TDM6 1919 aa8.06□□□□□ -1.12
SF3B1-209ENST00000479532 GNAT3A8MTJ3 354 aa8.06□□□□□ -1.12
SF3B1-209ENST00000479532 SPINT1O43278 529 aa8.06□□□□□ -1.12
SF3B1-209ENST00000479532 HTATSF1O43719 755 aaKnown RBP8.06□□□□□ -1.12
SF3B1-209ENST00000479532 NFE2L2Q16236 605 aa8.06□□□□□ -1.12
SF3B1-209ENST00000479532 LCE3BQ5TA77 95 aa8.06□□□□□ -1.12
SF3B1-209ENST00000479532 CCDC146Q8IYE0 955 aa8.06□□□□□ -1.12
SF3B1-209ENST00000479532 CCDC116Q8IYX3 515 aa8.06□□□□□ -1.12
SF3B1-209ENST00000479532 ARMC2Q8NEN0 867 aa8.06□□□□□ -1.12
SF3B1-209ENST00000479532 PLEKHF1Q96S99 279 aa8.06□□□□□ -1.12
SF3B1-209ENST00000479532 PODXL2Q9NZ53 605 aa8.06□□□□□ -1.12
SF3B1-209ENST00000479532 SBF2Q86WG5 1849 aa8.06□□□□□ -1.12
SF3B1-209ENST00000479532 NHSQ6T4R5 1651 aa8.05□□□□□ -1.12
SF3B1-209ENST00000479532 SCN11AQ9UI33 1791 aa8.05□□□□□ -1.12
SF3B1-209ENST00000479532 CYP27B1O15528 508 aa8.05□□□□□ -1.12
SF3B1-209ENST00000479532 LMOD1P29536 600 aaPredicted RBP8.05□□□□□ -1.12
SF3B1-209ENST00000479532 SYTL4Q96C24 671 aaPredicted RBP8.05□□□□□ -1.12
SF3B1-209ENST00000479532 TFIP11Q9UBB9 837 aaKnown RBP8.05□□□□□ -1.12
SF3B1-209ENST00000479532 ITGB4P16144 1822 aa8.04□□□□□ -1.12
SF3B1-209ENST00000479532 ERVV-2B6SEH9 535 aa8.04□□□□□ -1.12
SF3B1-209ENST00000479532 BCRP11274 1271 aa8.04□□□□□ -1.12
SF3B1-209ENST00000479532 TMPOP42166 694 aaKnown RBP8.04□□□□□ -1.12
SF3B1-209ENST00000479532 RIPK4P57078 832 aa8.04□□□□□ -1.12
SF3B1-209ENST00000479532 CABP4P57796 275 aa8.04□□□□□ -1.12
SF3B1-209ENST00000479532 CALD1Q05682 793 aaKnown RBP8.04□□□□□ -1.12
SF3B1-209ENST00000479532 TEFQ10587 303 aa8.04□□□□□ -1.12
SF3B1-209ENST00000479532 C4orf48Q5BLP8 95 aa8.04□□□□□ -1.12
SF3B1-209ENST00000479532 FAM182BQ5T319 152 aa8.04□□□□□ -1.12
SF3B1-209ENST00000479532 NBPF14Q5TI25 921 aa8.04□□□□□ -1.12
SF3B1-209ENST00000479532 CCDC125Q86Z20 511 aa8.04□□□□□ -1.12
SF3B1-209ENST00000479532 NGEFQ8N5V2 710 aa8.04□□□□□ -1.12
SF3B1-209ENST00000479532 GPKOWQ92917 476 aaPredicted RBP eCLIP8.04□□□□□ -1.12
SF3B1-209ENST00000479532 ACSBG1Q96GR2 724 aa8.04□□□□□ -1.12
SF3B1-209ENST00000479532 PHACTR3Q96KR7 559 aa8.04□□□□□ -1.12
SF3B1-209ENST00000479532 TRAIPQ9BWF2 469 aa8.04□□□□□ -1.12
SF3B1-209ENST00000479532 PGPEP1Q9NXJ5 209 aa8.04□□□□□ -1.12
SF3B1-209ENST00000479532 TMOD3Q9NYL9 352 aa8.04□□□□□ -1.12
SF3B1-209ENST00000479532 APAF1O14727 1248 aa8.03□□□□□ -1.12
SF3B1-209ENST00000479532 RNMTO43148 476 aaKnown RBP8.03□□□□□ -1.12
SF3B1-209ENST00000479532 HMGB2P26583 209 aaKnown RBP8.03□□□□□ -1.12
SF3B1-209ENST00000479532 PTK2Q05397 1052 aa8.03□□□□□ -1.12
SF3B1-209ENST00000479532 CBLBQ13191 982 aa8.03□□□□□ -1.12
SF3B1-209ENST00000479532 PDXDC2PQ6P474 469 aa8.03□□□□□ -1.12
SF3B1-209ENST00000479532 MPRIPQ6WCQ1 1025 aa8.03□□□□□ -1.12
SF3B1-209ENST00000479532 TBC1D9Q6ZT07 1266 aa8.03□□□□□ -1.12
SF3B1-209ENST00000479532 MAFBQ9Y5Q3 323 aaPredicted RBP8.03□□□□□ -1.12
SF3B1-209ENST00000479532 TOGARAM1Q9Y4F4 1720 aa8.03□□□□□ -1.12
SF3B1-209ENST00000479532 ADAMTS7Q9UKP4 1686 aa8.02□□□□□ -1.13
SF3B1-209ENST00000479532 BTAF1O14981 1849 aa8.02□□□□□ -1.13
SF3B1-209ENST00000479532 TRIM37O94972 964 aa8.02□□□□□ -1.13
SF3B1-209ENST00000479532 FOXR1Q6PIV2 292 aa8.02□□□□□ -1.13
SF3B1-209ENST00000479532 ILDR2Q71H61 639 aa8.02□□□□□ -1.13
SF3B1-209ENST00000479532 OCSTAMPQ9BR26 566 aa8.02□□□□□ -1.13
SF3B1-209ENST00000479532 GPSM3Q9Y4H4 160 aa8.02□□□□□ -1.13
SF3B1-209ENST00000479532 KDM6AO15550 1401 aaPredicted RBP8.02□□□□□ -1.13
SF3B1-209ENST00000479532 TNS1Q9HBL0 1735 aaKnown RBP8.01□□□□□ -1.13
SF3B1-209ENST00000479532 PIK3CDO00329 1044 aa8.01□□□□□ -1.13
SF3B1-209ENST00000479532 ATP9BO43861 1147 aa8.01□□□□□ -1.13
SF3B1-209ENST00000479532 APBA3O96018 575 aa8.01□□□□□ -1.13
SF3B1-209ENST00000479532 CTSOP43234 321 aaPredicted RBP8.01□□□□□ -1.13
SF3B1-209ENST00000479532 TTC5Q8N0Z6 440 aa8.01□□□□□ -1.13
SF3B1-209ENST00000479532 SMARCC1Q92922 1105 aaPredicted RBP8.01□□□□□ -1.13
SF3B1-209ENST00000479532 SLC52A2Q9HAB3 445 aa8.01□□□□□ -1.13
SF3B1-209ENST00000479532 POLMQ9NP87 494 aaPredicted RBP8.01□□□□□ -1.13
SF3B1-209ENST00000479532 RRP7AQ9Y3A4 280 aaKnown RBP8.01□□□□□ -1.13
SF3B1-209ENST00000479532 MRC1P22897 1456 aa8□□□□□ -1.13
SF3B1-209ENST00000479532 CEMIPQ8WUJ3 1361 aa8□□□□□ -1.13
SF3B1-209ENST00000479532 RGPD3A6NKT7 1758 aaPredicted RBP8□□□□□ -1.13
SF3B1-209ENST00000479532 SIPA1L3O60292 1781 aaPredicted RBP8□□□□□ -1.13
SF3B1-209ENST00000479532 RGPD4Q7Z3J3 1758 aa8□□□□□ -1.13
SF3B1-209ENST00000479532 BTBD11A6QL63 1104 aa8□□□□□ -1.13
SF3B1-209ENST00000479532 GAS6Q14393 721 aa8□□□□□ -1.13
SF3B1-209ENST00000479532 CCDC27Q2M243 656 aa8□□□□□ -1.13
SF3B1-209ENST00000479532 Q6ZVU0 165 aa8□□□□□ -1.13
SF3B1-209ENST00000479532 MCM10Q7L590 875 aa8□□□□□ -1.13
SF3B1-209ENST00000479532 UBE2Q2Q8WVN8 375 aa8□□□□□ -1.13
SF3B1-209ENST00000479532 ARHGAP9Q9BRR9 750 aa8□□□□□ -1.13
SF3B1-209ENST00000479532 LGR6Q9HBX8 967 aa8□□□□□ -1.13
SF3B1-209ENST00000479532 MBIPQ9NS73 344 aa8□□□□□ -1.13
SF3B1-209ENST00000479532 MAP4K5Q9Y4K4 846 aa8□□□□□ -1.13
SF3B1-209ENST00000479532 PCDHB9Q9Y5E1 797 aa8□□□□□ -1.13
SF3B1-209ENST00000479532 KRBA1A5PL33 1030 aa7.99□□□□□ -1.13
SF3B1-209ENST00000479532 KCNQ2O43526 872 aa7.99□□□□□ -1.13
SF3B1-209ENST00000479532 DCTN1Q14203 1278 aa7.99□□□□□ -1.13
SF3B1-209ENST00000479532 TAF7Q15545 349 aaPredicted RBP7.99□□□□□ -1.13
SF3B1-209ENST00000479532 PPP1R26Q5T8A7 1209 aaPredicted RBP7.99□□□□□ -1.13
SF3B1-209ENST00000479532 NFATC2IPQ8NCF5 419 aa7.99□□□□□ -1.13
SF3B1-209ENST00000479532 IL17REQ8NFR9 667 aa7.99□□□□□ -1.13
SF3B1-209ENST00000479532 ADAM32Q8TC27 787 aa7.99□□□□□ -1.13
SF3B1-209ENST00000479532 PIGBQ92521 554 aa7.99□□□□□ -1.13
SF3B1-209ENST00000479532 INSM2Q96T92 566 aaPredicted RBP7.99□□□□□ -1.13
SF3B1-209ENST00000479532 PLSCR1O15162 318 aa7.98□□□□□ -1.13
SF3B1-209ENST00000479532 BABAM1Q9NWV8 329 aa7.98□□□□□ -1.13
SF3B1-209ENST00000479532 LAS1LQ9Y4W2 734 aaKnown RBP7.98□□□□□ -1.13
SF3B1-209ENST00000479532 PAPPAQ13219 1627 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 197.7 ms