RNA–Protein interactions for RNA: ENST00000479525.6

ECHDC1-216, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 1,368 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-216ENST00000479525 MKRN3Q13064 507 aaKnown RBP21.93■■□□□ 1.1
ECHDC1-216ENST00000479525 NOGQ13253 232 aa21.93■■□□□ 1.1
ECHDC1-216ENST00000479525 TTLL12Q14166 644 aaPredicted RBP21.93■■□□□ 1.1
ECHDC1-216ENST00000479525 ZNF804AQ7Z570 1209 aa21.93■■□□□ 1.1
ECHDC1-216ENST00000479525 IQSEC3Q9UPP2 1182 aaPredicted RBP21.93■■□□□ 1.1
ECHDC1-216ENST00000479525 RASAL3Q86YV0 1011 aa21.92■■□□□ 1.1
ECHDC1-216ENST00000479525 HDAC9Q9UKV0 1011 aa21.92■■□□□ 1.1
ECHDC1-216ENST00000479525 MYH13Q9UKX3 1938 aa21.92■■□□□ 1.1
ECHDC1-216ENST00000479525 UTYO14607 1347 aa21.91■■□□□ 1.1
ECHDC1-216ENST00000479525 CLRN2A0PK11 232 aa21.91■■□□□ 1.1
ECHDC1-216ENST00000479525 SLC10A3P09131 477 aa21.91■■□□□ 1.1
ECHDC1-216ENST00000479525 PTPRCP08575 1304 aa21.91■■□□□ 1.1
ECHDC1-216ENST00000479525 IL1R1P14778 569 aa21.9■■□□□ 1.1
ECHDC1-216ENST00000479525 C15orf52Q6ZUT6 534 aaKnown RBP21.9■■□□□ 1.1
ECHDC1-216ENST00000479525 USP44Q9H0E7 712 aa21.9■■□□□ 1.1
ECHDC1-216ENST00000479525 ZBED3Q96IU2 234 aaPredicted RBP21.89■■□□□ 1.1
ECHDC1-216ENST00000479525 RIPOR2Q9Y4F9 1068 aa21.89■■□□□ 1.1
ECHDC1-216ENST00000479525 DLGAP5Q15398 846 aa21.88■■□□□ 1.09
ECHDC1-216ENST00000479525 CFAP100Q494V2 611 aa21.88■■□□□ 1.09
ECHDC1-216ENST00000479525 TRPA1O75762 1119 aa21.87■■□□□ 1.09
ECHDC1-216ENST00000479525 RBM5P52756 815 aaKnown RBP eCLIP21.87■■□□□ 1.09
ECHDC1-216ENST00000479525 GRIK5Q16478 980 aa21.87■■□□□ 1.09
ECHDC1-216ENST00000479525 RABL6Q3YEC7 729 aaPredicted RBP21.87■■□□□ 1.09
ECHDC1-216ENST00000479525 METTL24Q5JXM2 366 aa21.87■■□□□ 1.09
ECHDC1-216ENST00000479525 CCDC102AQ96A19 550 aa21.87■■□□□ 1.09
ECHDC1-216ENST00000479525 ABHD8Q96I13 439 aa21.87■■□□□ 1.09
ECHDC1-216ENST00000479525 FAM84BQ96KN1 310 aaPredicted RBP21.87■■□□□ 1.09
ECHDC1-216ENST00000479525 CHAF1AQ13111 956 aaPredicted RBP21.87■■□□□ 1.09
ECHDC1-216ENST00000479525 TRMT2AQ8IZ69 625 aaKnown RBP21.87■■□□□ 1.09
ECHDC1-216ENST00000479525 CSRNP1Q96S65 589 aa21.87■■□□□ 1.09
ECHDC1-216ENST00000479525 VEZTQ9HBM0 779 aa21.87■■□□□ 1.09
ECHDC1-216ENST00000479525 NOB1Q9ULX3 412 aaKnown RBP21.87■■□□□ 1.09
ECHDC1-216ENST00000479525 HIBADHP31937 336 aaKnown RBP21.86■■□□□ 1.09
ECHDC1-216ENST00000479525 UBE4AQ14139 1066 aa21.86■■□□□ 1.09
ECHDC1-216ENST00000479525 PRMT6Q96LA8 375 aaPredicted RBP21.86■■□□□ 1.09
ECHDC1-216ENST00000479525 SSC5DA1L4H1 1573 aa21.85■■□□□ 1.09
ECHDC1-216ENST00000479525 ALDH1L2Q3SY69 923 aa21.85■■□□□ 1.09
ECHDC1-216ENST00000479525 MFSD14BQ5SR56 506 aa21.85■■□□□ 1.09
ECHDC1-216ENST00000479525 APOBEC3FQ8IUX4 373 aaKnown RBP21.85■■□□□ 1.09
ECHDC1-216ENST00000479525 TDRD7Q8NHU6 1098 aaKnown RBP21.85■■□□□ 1.09
ECHDC1-216ENST00000479525 RNF186Q9NXI6 227 aa21.85■■□□□ 1.09
ECHDC1-216ENST00000479525 OTOFQ9HC10 1997 aa21.84■■□□□ 1.09
ECHDC1-216ENST00000479525 PTPN12Q05209 780 aaKnown RBP21.84■■□□□ 1.09
ECHDC1-216ENST00000479525 MROH5Q6ZUA9 1318 aa21.83■■□□□ 1.09
ECHDC1-216ENST00000479525 CCER2I3L3R5 266 aa21.83■■□□□ 1.08
ECHDC1-216ENST00000479525 VGLL2Q8N8G2 317 aa21.83■■□□□ 1.08
ECHDC1-216ENST00000479525 MCOLN1Q9GZU1 580 aa21.83■■□□□ 1.08
ECHDC1-216ENST00000479525 SIL1Q9H173 461 aa21.83■■□□□ 1.08
ECHDC1-216ENST00000479525 DEFB129Q9H1M3 183 aa21.83■■□□□ 1.08
ECHDC1-216ENST00000479525 ANGEL1Q9UNK9 670 aaKnown RBP21.83■■□□□ 1.08
ECHDC1-216ENST00000479525 TTF2Q9UNY4 1162 aaKnown RBP21.83■■□□□ 1.08
ECHDC1-216ENST00000479525 TNNQ9UQP3 1299 aa21.83■■□□□ 1.08
ECHDC1-216ENST00000479525 SPDYE2BA6NHP3 402 aa21.82■■□□□ 1.08
ECHDC1-216ENST00000479525 CCDC85CA6NKD9 419 aa21.82■■□□□ 1.08
ECHDC1-216ENST00000479525 CA12O43570 354 aa21.82■■□□□ 1.08
ECHDC1-216ENST00000479525 SPDYE6P0CI01 402 aa21.82■■□□□ 1.08
ECHDC1-216ENST00000479525 NF2P35240 595 aa21.82■■□□□ 1.08
ECHDC1-216ENST00000479525 DGKZQ13574 1117 aa21.82■■□□□ 1.08
ECHDC1-216ENST00000479525 FAM205AQ6ZU69 1335 aa21.82■■□□□ 1.08
ECHDC1-216ENST00000479525 RFX5P48382 616 aaPredicted RBP21.81■■□□□ 1.08
ECHDC1-216ENST00000479525 BCAMP50895 628 aa21.81■■□□□ 1.08
ECHDC1-216ENST00000479525 FKBP1BP68106 108 aa21.81■■□□□ 1.08
ECHDC1-216ENST00000479525 VPS37DQ86XT2 251 aa21.81■■□□□ 1.08
ECHDC1-216ENST00000479525 CDAN1Q8IWY9 1227 aa21.81■■□□□ 1.08
ECHDC1-216ENST00000479525 FRAT2O75474 233 aaPredicted RBP21.8■■□□□ 1.08
ECHDC1-216ENST00000479525 NBPF12Q5TAG4 269 aaPredicted RBP21.8■■□□□ 1.08
ECHDC1-216ENST00000479525 CLMNQ96JQ2 1002 aa21.8■■□□□ 1.08
ECHDC1-216ENST00000479525 TDRD3Q9H7E2 651 aaKnown RBP21.8■■□□□ 1.08
ECHDC1-216ENST00000479525 PDE8BO95263 885 aa21.79■■□□□ 1.08
ECHDC1-216ENST00000479525 FBXO33Q7Z6M2 555 aa21.79■■□□□ 1.08
ECHDC1-216ENST00000479525 MTMR14Q8NCE2 650 aa21.79■■□□□ 1.08
ECHDC1-216ENST00000479525 PA2G4Q9UQ80 394 aaKnown RBP21.79■■□□□ 1.08
ECHDC1-216ENST00000479525 LRRFIP2Q9Y608 721 aaKnown RBP21.79■■□□□ 1.08
ECHDC1-216ENST00000479525 UBTFL1P0CB47 393 aaPredicted RBP21.78■■□□□ 1.08
ECHDC1-216ENST00000479525 RARSP54136 660 aaKnown RBP21.78■■□□□ 1.08
ECHDC1-216ENST00000479525 FKBP1AP62942 108 aaKnown RBP21.78■■□□□ 1.08
ECHDC1-216ENST00000479525 ARMC9Q7Z3E5 817 aa21.78■■□□□ 1.08
ECHDC1-216ENST00000479525 MEIS3Q99687 375 aa21.78■■□□□ 1.08
ECHDC1-216ENST00000479525 TBC1D8O95759 1140 aa21.77■■□□□ 1.08
ECHDC1-216ENST00000479525 CACNB3P54284 484 aa21.77■■□□□ 1.08
ECHDC1-216ENST00000479525 ZNF70Q9UC06 446 aaPredicted RBP21.77■■□□□ 1.08
ECHDC1-216ENST00000479525 TCP10L2B9ZVM9 353 aa21.76■■□□□ 1.07
ECHDC1-216ENST00000479525 EYA2O00167 538 aa21.76■■□□□ 1.07
ECHDC1-216ENST00000479525 MYO1BO43795 1136 aa21.76■■□□□ 1.07
ECHDC1-216ENST00000479525 CRKP46108 304 aa21.76■■□□□ 1.07
ECHDC1-216ENST00000479525 RASA3Q14644 834 aa21.76■■□□□ 1.07
ECHDC1-216ENST00000479525 COL1A1P02452 1464 aaPredicted RBP21.76■■□□□ 1.07
ECHDC1-216ENST00000479525 MMP14P50281 582 aa21.75■■□□□ 1.07
ECHDC1-216ENST00000479525 CAVIN4Q5BKX8 364 aa21.75■■□□□ 1.07
ECHDC1-216ENST00000479525 ATG9AQ7Z3C6 839 aa21.75■■□□□ 1.07
ECHDC1-216ENST00000479525 DZIP1LQ8IYY4 767 aaKnown RBP21.75■■□□□ 1.07
ECHDC1-216ENST00000479525 MIER1Q8N108 512 aa21.75■■□□□ 1.07
ECHDC1-216ENST00000479525 SAGE1Q9NXZ1 904 aa21.75■■□□□ 1.07
ECHDC1-216ENST00000479525 BCAR3O75815 825 aa21.74■■□□□ 1.07
ECHDC1-216ENST00000479525 FGFR2P21802 821 aa21.74■■□□□ 1.07
ECHDC1-216ENST00000479525 AK9Q5TCS8 1911 aa21.74■■□□□ 1.07
ECHDC1-216ENST00000479525 PUM3Q15397 648 aaKnown RBP21.74■■□□□ 1.07
ECHDC1-216ENST00000479525 SPDYE2Q495Y8 402 aa21.74■■□□□ 1.07
ECHDC1-216ENST00000479525 LDLRAD1Q5T700 205 aa21.74■■□□□ 1.07
ECHDC1-216ENST00000479525 API5Q9BZZ5 524 aaKnown RBP21.74■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms