RNA–Protein interactions for RNA: ENST00000479341.1

RUNX3-204, Transcript of runt related transcription factor 3, humanhuman

TSL 1 (best)

Gene RUNX3, Length 284 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX3-204ENST00000479341 CCDC88AQ3V6T2 1871 aa22.74■■□□□ 1.23
RUNX3-204ENST00000479341 AOX1Q06278 1338 aa22.74■■□□□ 1.23
RUNX3-204ENST00000479341 C9orf131Q5VYM1 1079 aa22.73■■□□□ 1.23
RUNX3-204ENST00000479341 RNF181Q9P0P0 153 aa22.73■■□□□ 1.23
RUNX3-204ENST00000479341 DENND2AQ9ULE3 1009 aa22.73■■□□□ 1.23
RUNX3-204ENST00000479341 FAM205AQ6ZU69 1335 aa22.73■■□□□ 1.23
RUNX3-204ENST00000479341 FZD9O00144 591 aa22.72■■□□□ 1.23
RUNX3-204ENST00000479341 ERC2O15083 957 aa22.72■■□□□ 1.23
RUNX3-204ENST00000479341 GLRX3O76003 335 aaKnown RBP22.72■■□□□ 1.23
RUNX3-204ENST00000479341 BOLA2Q9H3K6 86 aa22.72■■□□□ 1.23
RUNX3-204ENST00000479341 KCNQ5Q9NR82 932 aa22.72■■□□□ 1.23
RUNX3-204ENST00000479341 PDS5AQ29RF7 1337 aaKnown RBP22.72■■□□□ 1.23
RUNX3-204ENST00000479341 DICER1Q9UPY3 1922 aaKnown RBP22.72■■□□□ 1.23
RUNX3-204ENST00000479341 COL1A1P02452 1464 aaPredicted RBP22.72■■□□□ 1.23
RUNX3-204ENST00000479341 FRAT2O75474 233 aaPredicted RBP22.71■■□□□ 1.23
RUNX3-204ENST00000479341 SPATA5Q8NB90 893 aa22.71■■□□□ 1.23
RUNX3-204ENST00000479341 HAUS7Q99871 368 aa22.71■■□□□ 1.23
RUNX3-204ENST00000479341 SNRKQ9NRH2 765 aa22.71■■□□□ 1.23
RUNX3-204ENST00000479341 AKAP11Q9UKA4 1901 aa22.7■■□□□ 1.23
RUNX3-204ENST00000479341 GTF2IP78347 998 aa22.7■■□□□ 1.22
RUNX3-204ENST00000479341 PI16Q6UXB8 463 aa22.7■■□□□ 1.22
RUNX3-204ENST00000479341 SCN9AQ15858 1988 aa22.7■■□□□ 1.22
RUNX3-204ENST00000479341 USP17L3A6NCW0 530 aa22.69■■□□□ 1.22
RUNX3-204ENST00000479341 USP17L4A6NCW7 530 aa22.69■■□□□ 1.22
RUNX3-204ENST00000479341 ZAP70P43403 619 aa22.69■■□□□ 1.22
RUNX3-204ENST00000479341 CXCL9Q07325 125 aa22.69■■□□□ 1.22
RUNX3-204ENST00000479341 CHAF1AQ13111 956 aaPredicted RBP22.69■■□□□ 1.22
RUNX3-204ENST00000479341 STRIP1Q5VSL9 837 aa22.69■■□□□ 1.22
RUNX3-204ENST00000479341 TTLL5Q6EMB2 1281 aa22.69■■□□□ 1.22
RUNX3-204ENST00000479341 USP17L1Q7RTZ2 530 aa22.69■■□□□ 1.22
RUNX3-204ENST00000479341 RGS3P49796 1198 aa22.68■■□□□ 1.22
RUNX3-204ENST00000479341 WDR66Q8TBY9 1149 aa22.68■■□□□ 1.22
RUNX3-204ENST00000479341 SALL1Q9NSC2 1324 aa22.67■■□□□ 1.22
RUNX3-204ENST00000479341 RAD17O75943 681 aa22.67■■□□□ 1.22
RUNX3-204ENST00000479341 CYP2E1P05181 493 aaPredicted RBP22.67■■□□□ 1.22
RUNX3-204ENST00000479341 EIF6P56537 245 aaKnown RBP22.67■■□□□ 1.22
RUNX3-204ENST00000479341 DACT2Q5SW24 774 aa22.67■■□□□ 1.22
RUNX3-204ENST00000479341 JAG2Q9Y219 1238 aa22.67■■□□□ 1.22
RUNX3-204ENST00000479341 NDUFB9Q9Y6M9 179 aa22.67■■□□□ 1.22
RUNX3-204ENST00000479341 VIL1P09327 827 aaKnown RBP22.66■■□□□ 1.22
RUNX3-204ENST00000479341 FKBP1AP62942 108 aaKnown RBP22.66■■□□□ 1.22
RUNX3-204ENST00000479341 CIAPIN1Q6FI81 312 aa22.66■■□□□ 1.22
RUNX3-204ENST00000479341 TBC1D22AQ8WUA7 517 aa22.66■■□□□ 1.22
RUNX3-204ENST00000479341 DNAJC2Q99543 621 aaKnown RBP22.66■■□□□ 1.22
RUNX3-204ENST00000479341 PSMD14O00487 310 aa22.65■■□□□ 1.22
RUNX3-204ENST00000479341 TNIP1Q15025 636 aa22.65■■□□□ 1.22
RUNX3-204ENST00000479341 TTC22Q5TAA0 569 aa22.65■■□□□ 1.22
RUNX3-204ENST00000479341 EDC3Q96F86 508 aaKnown RBP22.65■■□□□ 1.22
RUNX3-204ENST00000479341 ANTXR1Q9H6X2 564 aa22.65■■□□□ 1.22
RUNX3-204ENST00000479341 PAG1Q9NWQ8 432 aa22.65■■□□□ 1.22
RUNX3-204ENST00000479341 MYH13Q9UKX3 1938 aa22.65■■□□□ 1.22
RUNX3-204ENST00000479341 ZNF646O15015 1829 aaPredicted RBP22.64■■□□□ 1.22
RUNX3-204ENST00000479341 PSME4Q14997 1843 aa22.64■■□□□ 1.22
RUNX3-204ENST00000479341 ZNF541Q9H0D2 1346 aa22.64■■□□□ 1.22
RUNX3-204ENST00000479341 ZC3H4Q9UPT8 1303 aaKnown RBP22.64■■□□□ 1.22
RUNX3-204ENST00000479341 GOLIM4O00461 696 aa22.64■■□□□ 1.21
RUNX3-204ENST00000479341 TBC1D9Q6ZT07 1266 aa22.64■■□□□ 1.21
RUNX3-204ENST00000479341 CERS5Q8N5B7 392 aa22.64■■□□□ 1.21
RUNX3-204ENST00000479341 FBXW7Q969H0 707 aa22.64■■□□□ 1.21
RUNX3-204ENST00000479341 MXD3Q9BW11 206 aa22.64■■□□□ 1.21
RUNX3-204ENST00000479341 PIH1D3Q9NQM4 214 aaKnown RBP22.64■■□□□ 1.21
RUNX3-204ENST00000479341 GSPT1P15170 499 aaKnown RBP22.63■■□□□ 1.21
RUNX3-204ENST00000479341 MFSD14BQ5SR56 506 aa22.63■■□□□ 1.21
RUNX3-204ENST00000479341 RSBN1LQ6PCB5 846 aaPredicted RBP22.63■■□□□ 1.21
RUNX3-204ENST00000479341 GPBP1L1Q9HC44 474 aaPredicted RBP22.63■■□□□ 1.21
RUNX3-204ENST00000479341 MAP4K4O95819 1239 aaPredicted RBP22.62■■□□□ 1.21
RUNX3-204ENST00000479341 TTF1Q15361 905 aaPredicted RBP22.62■■□□□ 1.21
RUNX3-204ENST00000479341 GRIK5Q16478 980 aa22.62■■□□□ 1.21
RUNX3-204ENST00000479341 ZGPATQ8N5A5 531 aaKnown RBP22.62■■□□□ 1.21
RUNX3-204ENST00000479341 ZNF526Q8TF50 670 aaPredicted RBP22.62■■□□□ 1.21
RUNX3-204ENST00000479341 GMLQ99445 158 aa22.62■■□□□ 1.21
RUNX3-204ENST00000479341 SUGT1Q9Y2Z0 365 aa22.62■■□□□ 1.21
RUNX3-204ENST00000479341 TIAM2Q8IVF5 1701 aa22.62■■□□□ 1.21
RUNX3-204ENST00000479341 ABCF2Q9UG63 623 aa22.61■■□□□ 1.21
RUNX3-204ENST00000479341 MYO3BQ8WXR4 1341 aa22.6■■□□□ 1.21
RUNX3-204ENST00000479341 SPTY2D1Q68D10 685 aaPredicted RBP22.6■■□□□ 1.21
RUNX3-204ENST00000479341 AGBL3Q8NEM8 1001 aa22.6■■□□□ 1.21
RUNX3-204ENST00000479341 EVI5LQ96CN4 794 aa22.6■■□□□ 1.21
RUNX3-204ENST00000479341 ZBTB12Q9Y330 459 aaPredicted RBP22.6■■□□□ 1.21
RUNX3-204ENST00000479341 IGSF3O75054 1194 aa22.59■■□□□ 1.21
RUNX3-204ENST00000479341 PRDX5P30044 214 aa22.59■■□□□ 1.21
RUNX3-204ENST00000479341 BMP2KLQ5H9B9 411 aa22.59■■□□□ 1.21
RUNX3-204ENST00000479341 ERICH6Q7L0X2 663 aa22.59■■□□□ 1.21
RUNX3-204ENST00000479341 GPC2Q8N158 579 aa22.59■■□□□ 1.21
RUNX3-204ENST00000479341 KBTBD3Q8NAB2 608 aa22.59■■□□□ 1.21
RUNX3-204ENST00000479341 LRP2BPQ9P2M1 347 aa22.59■■□□□ 1.21
RUNX3-204ENST00000479341 GJA3Q9Y6H8 435 aa22.59■■□□□ 1.21
RUNX3-204ENST00000479341 LDHBP07195 334 aaKnown RBP22.58■■□□□ 1.21
RUNX3-204ENST00000479341 SDSP20132 328 aa22.58■■□□□ 1.21
RUNX3-204ENST00000479341 RPS12P25398 132 aaKnown RBP22.58■■□□□ 1.21
RUNX3-204ENST00000479341 CNTROBQ8N137 903 aa22.58■■□□□ 1.21
RUNX3-204ENST00000479341 TRIM6-TRIM34B2RNG4 842 aa22.57■■□□□ 1.2
RUNX3-204ENST00000479341 DDNO94850 711 aaPredicted RBP22.57■■□□□ 1.2
RUNX3-204ENST00000479341 DPF2Q92785 391 aa22.57■■□□□ 1.2
RUNX3-204ENST00000479341 IDH1O75874 414 aaKnown RBP22.56■■□□□ 1.2
RUNX3-204ENST00000479341 GMPSP49915 693 aaPredicted RBP22.56■■□□□ 1.2
RUNX3-204ENST00000479341 MAP3K12Q12852 859 aa22.56■■□□□ 1.2
RUNX3-204ENST00000479341 DPY19L2Q6NUT2 758 aa22.56■■□□□ 1.2
RUNX3-204ENST00000479341 KIAA0825Q8IV33 1275 aa22.56■■□□□ 1.2
RUNX3-204ENST00000479341 ZNF384Q8TF68 577 aa22.56■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms