RNA–Protein interactions for RNA: ENST00000479008.1

SMARCAL1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-211ENST00000479008 MAP4K4O95819 1239 aaPredicted RBP16.62■□□□□ 0.25
SMARCAL1-211ENST00000479008 IL1R1P14778 569 aa16.62■□□□□ 0.25
SMARCAL1-211ENST00000479008 PI16Q6UXB8 463 aa16.62■□□□□ 0.25
SMARCAL1-211ENST00000479008 TDRD7Q8NHU6 1098 aaKnown RBP16.62■□□□□ 0.25
SMARCAL1-211ENST00000479008 DNAJC2Q99543 621 aaKnown RBP16.62■□□□□ 0.25
SMARCAL1-211ENST00000479008 HAUS7Q99871 368 aa16.62■□□□□ 0.25
SMARCAL1-211ENST00000479008 HMG20BQ9P0W2 317 aa16.62■□□□□ 0.25
SMARCAL1-211ENST00000479008 DENND2AQ9ULE3 1009 aa16.62■□□□□ 0.25
SMARCAL1-211ENST00000479008 NDUFB9Q9Y6M9 179 aa16.62■□□□□ 0.25
SMARCAL1-211ENST00000479008 DOCK2Q92608 1830 aa16.61■□□□□ 0.25
SMARCAL1-211ENST00000479008 GSPT1P15170 499 aaKnown RBP16.61■□□□□ 0.25
SMARCAL1-211ENST00000479008 PRELPP51888 382 aa16.61■□□□□ 0.25
SMARCAL1-211ENST00000479008 CHAF1AQ13111 956 aaPredicted RBP16.61■□□□□ 0.25
SMARCAL1-211ENST00000479008 SPATA5Q8NB90 893 aa16.61■□□□□ 0.25
SMARCAL1-211ENST00000479008 TIAM2Q8IVF5 1701 aa16.6■□□□□ 0.25
SMARCAL1-211ENST00000479008 SRCAPQ6ZRS2 3230 aa16.6■□□□□ 0.25
SMARCAL1-211ENST00000479008 GOLGB1Q14789 3259 aaKnown RBP16.6■□□□□ 0.25
SMARCAL1-211ENST00000479008 ZAP70P43403 619 aa16.6■□□□□ 0.25
SMARCAL1-211ENST00000479008 PODNQ7Z5L7 613 aa16.6■□□□□ 0.25
SMARCAL1-211ENST00000479008 NIM1KQ8IY84 436 aa16.6■□□□□ 0.25
SMARCAL1-211ENST00000479008 JAG2Q9Y219 1238 aa16.6■□□□□ 0.25
SMARCAL1-211ENST00000479008 TRIM6-TRIM34B2RNG4 842 aa16.59■□□□□ 0.25
SMARCAL1-211ENST00000479008 GOLIM4O00461 696 aa16.59■□□□□ 0.25
SMARCAL1-211ENST00000479008 ZBTB22O15209 634 aa16.59■□□□□ 0.25
SMARCAL1-211ENST00000479008 GRIN3BO60391 1043 aa16.59■□□□□ 0.25
SMARCAL1-211ENST00000479008 FBXW7Q969H0 707 aa16.59■□□□□ 0.25
SMARCAL1-211ENST00000479008 EDC3Q96F86 508 aaKnown RBP16.59■□□□□ 0.25
SMARCAL1-211ENST00000479008 PAG1Q9NWQ8 432 aa16.59■□□□□ 0.25
SMARCAL1-211ENST00000479008 YDJCA8MPS7 323 aa16.58■□□□□ 0.24
SMARCAL1-211ENST00000479008 LMNB1P20700 586 aa16.58■□□□□ 0.24
SMARCAL1-211ENST00000479008 GTF2IP78347 998 aa16.58■□□□□ 0.24
SMARCAL1-211ENST00000479008 JDP2Q8WYK2 163 aa16.58■□□□□ 0.24
SMARCAL1-211ENST00000479008 RILPL2Q969X0 211 aa16.58■□□□□ 0.24
SMARCAL1-211ENST00000479008 ANTXR1Q9H6X2 564 aa16.58■□□□□ 0.24
SMARCAL1-211ENST00000479008 PDS5AQ29RF7 1337 aaKnown RBP16.58■□□□□ 0.24
SMARCAL1-211ENST00000479008 MAST2Q6P0Q8 1798 aa16.57■□□□□ 0.24
SMARCAL1-211ENST00000479008 FAM205AQ6ZU69 1335 aa16.57■□□□□ 0.24
SMARCAL1-211ENST00000479008 CYP2E1P05181 493 aaPredicted RBP16.57■□□□□ 0.24
SMARCAL1-211ENST00000479008 SDSP20132 328 aa16.57■□□□□ 0.24
SMARCAL1-211ENST00000479008 BMP2KLQ5H9B9 411 aa16.57■□□□□ 0.24
SMARCAL1-211ENST00000479008 CNTROBQ8N137 903 aa16.57■□□□□ 0.24
SMARCAL1-211ENST00000479008 KCNQ5Q9NR82 932 aa16.57■□□□□ 0.24
SMARCAL1-211ENST00000479008 ZNRF3Q9ULT6 936 aa16.57■□□□□ 0.24
SMARCAL1-211ENST00000479008 TTLL5Q6EMB2 1281 aa16.56■□□□□ 0.24
SMARCAL1-211ENST00000479008 TBC1D9Q6ZT07 1266 aa16.56■□□□□ 0.24
SMARCAL1-211ENST00000479008 WDR66Q8TBY9 1149 aa16.56■□□□□ 0.24
SMARCAL1-211ENST00000479008 EVI5LQ96CN4 794 aa16.56■□□□□ 0.24
SMARCAL1-211ENST00000479008 PIH1D3Q9NQM4 214 aaKnown RBP16.56■□□□□ 0.24
SMARCAL1-211ENST00000479008 USP17L3A6NCW0 530 aa16.55■□□□□ 0.24
SMARCAL1-211ENST00000479008 USP17L4A6NCW7 530 aa16.55■□□□□ 0.24
SMARCAL1-211ENST00000479008 TTF1Q15361 905 aaPredicted RBP16.55■□□□□ 0.24
SMARCAL1-211ENST00000479008 USP17L1Q7RTZ2 530 aa16.55■□□□□ 0.24
SMARCAL1-211ENST00000479008 FSD1Q9BTV5 496 aa16.55■□□□□ 0.24
SMARCAL1-211ENST00000479008 RNF181Q9P0P0 153 aa16.55■□□□□ 0.24
SMARCAL1-211ENST00000479008 ABCF2Q9UG63 623 aa16.55■□□□□ 0.24
SMARCAL1-211ENST00000479008 RAD17O75943 681 aa16.54■□□□□ 0.24
SMARCAL1-211ENST00000479008 STRIP1Q5VSL9 837 aa16.54■□□□□ 0.24
SMARCAL1-211ENST00000479008 ZGPATQ8N5A5 531 aaKnown RBP16.54■□□□□ 0.24
SMARCAL1-211ENST00000479008 KBTBD3Q8NAB2 608 aa16.54■□□□□ 0.24
SMARCAL1-211ENST00000479008 TBC1D22AQ8WUA7 517 aa16.54■□□□□ 0.24
SMARCAL1-211ENST00000479008 MYH2Q9UKX2 1941 aa16.53■□□□□ 0.24
SMARCAL1-211ENST00000479008 SALL1Q9NSC2 1324 aa16.53■□□□□ 0.24
SMARCAL1-211ENST00000479008 DCAF8L1A6NGE4 600 aa16.53■□□□□ 0.24
SMARCAL1-211ENST00000479008 IDH1O75874 414 aaKnown RBP16.53■□□□□ 0.24
SMARCAL1-211ENST00000479008 MFSD14BQ5SR56 506 aa16.53■□□□□ 0.24
SMARCAL1-211ENST00000479008 DACT2Q5SW24 774 aa16.53■□□□□ 0.24
SMARCAL1-211ENST00000479008 C9orf131Q5VYM1 1079 aa16.53■□□□□ 0.24
SMARCAL1-211ENST00000479008 MXD3Q9BW11 206 aa16.53■□□□□ 0.24
SMARCAL1-211ENST00000479008 LRP2BPQ9P2M1 347 aa16.53■□□□□ 0.24
SMARCAL1-211ENST00000479008 FZD9O00144 591 aa16.52■□□□□ 0.24
SMARCAL1-211ENST00000479008 PSMD14O00487 310 aa16.52■□□□□ 0.24
SMARCAL1-211ENST00000479008 EIF6P56537 245 aaKnown RBP16.52■□□□□ 0.24
SMARCAL1-211ENST00000479008 CXCL9Q07325 125 aa16.52■□□□□ 0.24
SMARCAL1-211ENST00000479008 SPTY2D1Q68D10 685 aaPredicted RBP16.52■□□□□ 0.24
SMARCAL1-211ENST00000479008 CIAPIN1Q6FI81 312 aa16.52■□□□□ 0.24
SMARCAL1-211ENST00000479008 ERICH6Q7L0X2 663 aa16.52■□□□□ 0.24
SMARCAL1-211ENST00000479008 CERS5Q8N5B7 392 aa16.52■□□□□ 0.24
SMARCAL1-211ENST00000479008 RAI14Q9P0K7 980 aa16.52■□□□□ 0.24
SMARCAL1-211ENST00000479008 PRDX5P30044 214 aa16.51■□□□□ 0.23
SMARCAL1-211ENST00000479008 FKBP1AP62942 108 aaKnown RBP16.51■□□□□ 0.23
SMARCAL1-211ENST00000479008 MAP3K12Q12852 859 aa16.51■□□□□ 0.23
SMARCAL1-211ENST00000479008 GRIK5Q16478 980 aa16.51■□□□□ 0.23
SMARCAL1-211ENST00000479008 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.51■□□□□ 0.23
SMARCAL1-211ENST00000479008 RFX7Q2KHR2 1363 aa16.51■□□□□ 0.23
SMARCAL1-211ENST00000479008 ZNF541Q9H0D2 1346 aa16.5■□□□□ 0.23
SMARCAL1-211ENST00000479008 LDHBP07195 334 aaKnown RBP16.5■□□□□ 0.23
SMARCAL1-211ENST00000479008 VIL1P09327 827 aaKnown RBP16.5■□□□□ 0.23
SMARCAL1-211ENST00000479008 RSBN1LQ6PCB5 846 aaPredicted RBP16.5■□□□□ 0.23
SMARCAL1-211ENST00000479008 ADAMTSL1Q8N6G6 1762 aa16.5■□□□□ 0.23
SMARCAL1-211ENST00000479008 F8W031 263 aaPredicted RBP16.49■□□□□ 0.23
SMARCAL1-211ENST00000479008 CDC45O75419 566 aa16.49■□□□□ 0.23
SMARCAL1-211ENST00000479008 TNIP1Q15025 636 aa16.49■□□□□ 0.23
SMARCAL1-211ENST00000479008 ZSCAN25Q6NSZ9 544 aa16.49■□□□□ 0.23
SMARCAL1-211ENST00000479008 DZIP1Q86YF9 867 aaKnown RBP16.49■□□□□ 0.23
SMARCAL1-211ENST00000479008 MAGEB6Q8N7X4 407 aa16.49■□□□□ 0.23
SMARCAL1-211ENST00000479008 GJA3Q9Y6H8 435 aa16.49■□□□□ 0.23
SMARCAL1-211ENST00000479008 MYO3BQ8WXR4 1341 aa16.48■□□□□ 0.23
SMARCAL1-211ENST00000479008 RNF113AO15541 343 aaKnown RBP16.48■□□□□ 0.23
SMARCAL1-211ENST00000479008 CHGBP05060 677 aa16.48■□□□□ 0.23
SMARCAL1-211ENST00000479008 PDE6AP16499 860 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms