RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.5□□□□□ -1.05
CCDC171-207ENST00000478913 C20orf204Q6ZNR8 217 aa8.5□□□□□ -1.05
CCDC171-207ENST00000478913 FOXD4L4Q8WXT5 416 aaPredicted RBP8.5□□□□□ -1.05
CCDC171-207ENST00000478913 ZNF326Q5BKZ1 582 aaKnown RBP8.49□□□□□ -1.05
CCDC171-207ENST00000478913 KIAA0319Q5VV43 1072 aa8.49□□□□□ -1.05
CCDC171-207ENST00000478913 PI16Q6UXB8 463 aa8.49□□□□□ -1.05
CCDC171-207ENST00000478913 TTC9Q92623 222 aa8.49□□□□□ -1.05
CCDC171-207ENST00000478913 EHD4Q9H223 541 aa8.49□□□□□ -1.05
CCDC171-207ENST00000478913 LIN7BQ9HAP6 207 aa8.49□□□□□ -1.05
CCDC171-207ENST00000478913 IQSEC2Q5JU85 1478 aa8.49□□□□□ -1.05
CCDC171-207ENST00000478913 ARID4BQ4LE39 1312 aaPredicted RBP8.49□□□□□ -1.05
CCDC171-207ENST00000478913 PDE2AO00408 941 aaPredicted RBP8.48□□□□□ -1.05
CCDC171-207ENST00000478913 MSTNO14793 375 aa8.48□□□□□ -1.05
CCDC171-207ENST00000478913 TAGLNQ01995 201 aaKnown RBP8.48□□□□□ -1.05
CCDC171-207ENST00000478913 C8orf86Q6ZUL3 223 aa8.48□□□□□ -1.05
CCDC171-207ENST00000478913 Q8N3U1 123 aa8.48□□□□□ -1.05
CCDC171-207ENST00000478913 HHIPQ96QV1 700 aa8.48□□□□□ -1.05
CCDC171-207ENST00000478913 DUSP9Q99956 384 aaKnown RBP8.48□□□□□ -1.05
CCDC171-207ENST00000478913 SUV39H2Q9H5I1 410 aa8.48□□□□□ -1.05
CCDC171-207ENST00000478913 TRIM33Q9UPN9 1127 aa8.48□□□□□ -1.05
CCDC171-207ENST00000478913 SPG7Q9UQ90 795 aa8.48□□□□□ -1.05
CCDC171-207ENST00000478913 FAM177BA6PVY3 158 aa8.47□□□□□ -1.05
CCDC171-207ENST00000478913 NFKBIEO00221 500 aa8.47□□□□□ -1.05
CCDC171-207ENST00000478913 DGKGP49619 791 aa8.47□□□□□ -1.05
CCDC171-207ENST00000478913 XPCQ01831 940 aaPredicted RBP8.47□□□□□ -1.05
CCDC171-207ENST00000478913 GDF6Q6KF10 455 aaPredicted RBP8.47□□□□□ -1.05
CCDC171-207ENST00000478913 TMEM102Q8N9M5 508 aaPredicted RBP8.47□□□□□ -1.05
CCDC171-207ENST00000478913 PRDM6Q9NQX0 595 aa8.47□□□□□ -1.05
CCDC171-207ENST00000478913 TRAK1Q9UPV9 953 aa8.47□□□□□ -1.05
CCDC171-207ENST00000478913 CFTRP13569 1480 aa8.46□□□□□ -1.05
CCDC171-207ENST00000478913 TOPBP1Q92547 1522 aa8.46□□□□□ -1.05
CCDC171-207ENST00000478913 ZNF16P17020 682 aaPredicted RBP8.46□□□□□ -1.06
CCDC171-207ENST00000478913 PTPRAP18433 802 aa8.46□□□□□ -1.06
CCDC171-207ENST00000478913 YY1P25490 414 aa8.46□□□□□ -1.06
CCDC171-207ENST00000478913 GNA15P30679 374 aa8.46□□□□□ -1.06
CCDC171-207ENST00000478913 AFF1P51825 1210 aaKnown RBP8.46□□□□□ -1.06
CCDC171-207ENST00000478913 GRM2Q14416 872 aa8.46□□□□□ -1.06
CCDC171-207ENST00000478913 SCARF2Q96GP6 870 aaPredicted RBP8.46□□□□□ -1.06
CCDC171-207ENST00000478913 DCAF5Q96JK2 942 aa8.46□□□□□ -1.06
CCDC171-207ENST00000478913 BHLHE41Q9C0J9 482 aaPredicted RBP8.46□□□□□ -1.06
CCDC171-207ENST00000478913 LACRTQ9GZZ8 138 aa8.46□□□□□ -1.06
CCDC171-207ENST00000478913 BCL11AQ9H165 835 aa8.46□□□□□ -1.06
CCDC171-207ENST00000478913 CEP170Q5SW79 1584 aa8.46□□□□□ -1.06
CCDC171-207ENST00000478913 KIF21BO75037 1637 aa8.46□□□□□ -1.06
CCDC171-207ENST00000478913 RBM47A0AV96 593 aaKnown RBP8.45□□□□□ -1.06
CCDC171-207ENST00000478913 CCNJLQ8IV13 435 aa8.45□□□□□ -1.06
CCDC171-207ENST00000478913 ASAP3Q8TDY4 903 aa8.45□□□□□ -1.06
CCDC171-207ENST00000478913 NXPE3Q969Y0 559 aa8.45□□□□□ -1.06
CCDC171-207ENST00000478913 FRMD6Q96NE9 622 aa8.45□□□□□ -1.06
CCDC171-207ENST00000478913 TCF12Q99081 682 aa8.45□□□□□ -1.06
CCDC171-207ENST00000478913 POP1Q99575 1024 aaKnown RBP8.45□□□□□ -1.06
CCDC171-207ENST00000478913 BCO2Q9BYV7 579 aa8.45□□□□□ -1.06
CCDC171-207ENST00000478913 PARP2Q9UGN5 583 aa8.45□□□□□ -1.06
CCDC171-207ENST00000478913 MKL2Q9ULH7 1088 aa8.45□□□□□ -1.06
CCDC171-207ENST00000478913 GIPC1O14908 333 aa8.44□□□□□ -1.06
CCDC171-207ENST00000478913 HOXB4P17483 251 aaPredicted RBP8.44□□□□□ -1.06
CCDC171-207ENST00000478913 SNRPNP63162 240 aaKnown RBP8.44□□□□□ -1.06
CCDC171-207ENST00000478913 PSMD2Q13200 908 aa8.44□□□□□ -1.06
CCDC171-207ENST00000478913 GRIK5Q16478 980 aa8.44□□□□□ -1.06
CCDC171-207ENST00000478913 NXPE4Q6UWF7 544 aa8.44□□□□□ -1.06
CCDC171-207ENST00000478913 PODNQ7Z5L7 613 aa8.44□□□□□ -1.06
CCDC171-207ENST00000478913 CACTIN-AS1Q8N1I8 211 aa8.44□□□□□ -1.06
CCDC171-207ENST00000478913 PPP4R2Q9NY27 417 aa8.44□□□□□ -1.06
CCDC171-207ENST00000478913 PPRC1Q5VV67 1664 aaKnown RBP8.43□□□□□ -1.06
CCDC171-207ENST00000478913 SETD1AO15047 1707 aaKnown RBP8.43□□□□□ -1.06
CCDC171-207ENST00000478913 METTL12A8MUP2 240 aa8.43□□□□□ -1.06
CCDC171-207ENST00000478913 PIK3R2O00459 728 aa8.43□□□□□ -1.06
CCDC171-207ENST00000478913 PRPF40BQ6NWY9 871 aaKnown RBP8.43□□□□□ -1.06
CCDC171-207ENST00000478913 WFDC8Q8IUA0 241 aa8.43□□□□□ -1.06
CCDC171-207ENST00000478913 IL22RA1Q8N6P7 574 aa8.43□□□□□ -1.06
CCDC171-207ENST00000478913 SRCIN1Q9C0H9 1055 aa8.43□□□□□ -1.06
CCDC171-207ENST00000478913 RNF19AQ9NV58 838 aa8.43□□□□□ -1.06
CCDC171-207ENST00000478913 ADAMTSL3P82987 1691 aa8.43□□□□□ -1.06
CCDC171-207ENST00000478913 NID1P14543 1247 aa8.42□□□□□ -1.06
CCDC171-207ENST00000478913 EIF4BP23588 611 aaKnown RBP8.42□□□□□ -1.06
CCDC171-207ENST00000478913 CDC27P30260 824 aa8.42□□□□□ -1.06
CCDC171-207ENST00000478913 ITGAEP38570 1179 aa8.42□□□□□ -1.06
CCDC171-207ENST00000478913 GRIA4P48058 902 aa8.42□□□□□ -1.06
CCDC171-207ENST00000478913 DAB2P98082 770 aa8.42□□□□□ -1.06
CCDC171-207ENST00000478913 MSL1Q68DK7 614 aa8.42□□□□□ -1.06
CCDC171-207ENST00000478913 GLIS3Q8NEA6 775 aa8.42□□□□□ -1.06
CCDC171-207ENST00000478913 BSNDQ8WZ55 320 aa8.42□□□□□ -1.06
CCDC171-207ENST00000478913 FAM161BQ96MY7 647 aa8.42□□□□□ -1.06
CCDC171-207ENST00000478913 OSBPL7Q9BZF2 842 aa8.42□□□□□ -1.06
CCDC171-207ENST00000478913 ADAM19Q9H013 955 aa8.42□□□□□ -1.06
CCDC171-207ENST00000478913 C12orf49Q9H741 205 aa8.42□□□□□ -1.06
CCDC171-207ENST00000478913 MRS2Q9HD23 443 aa8.42□□□□□ -1.06
CCDC171-207ENST00000478913 ABCB6Q9NP58 842 aa8.42□□□□□ -1.06
CCDC171-207ENST00000478913 CNTNAP5Q8WYK1 1306 aa8.42□□□□□ -1.06
CCDC171-207ENST00000478913 ZCCHC6Q5VYS8 1495 aaKnown RBP8.42□□□□□ -1.06
CCDC171-207ENST00000478913 MAGI1Q96QZ7 1491 aaPredicted RBP8.42□□□□□ -1.06
CCDC171-207ENST00000478913 MROH2BQ7Z745 1585 aa8.42□□□□□ -1.06
CCDC171-207ENST00000478913 TARBP1Q13395 1621 aaKnown RBP8.41□□□□□ -1.06
CCDC171-207ENST00000478913 A0A096LPE4 126 aa8.41□□□□□ -1.06
CCDC171-207ENST00000478913 TMEM238LA0A1B0GVL6 79 aa8.41□□□□□ -1.06
CCDC171-207ENST00000478913 A0A1W2PPZ6 126 aa8.41□□□□□ -1.06
CCDC171-207ENST00000478913 GNB5O14775 395 aa8.41□□□□□ -1.06
CCDC171-207ENST00000478913 FCGRTP55899 365 aa8.41□□□□□ -1.06
CCDC171-207ENST00000478913 CABP4P57796 275 aa8.41□□□□□ -1.06
CCDC171-207ENST00000478913 COL9A3Q14050 684 aaPredicted RBP8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms