RNA–Protein interactions for RNA: ENST00000478327.1

NECTIN3-204, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 4

Gene NECTIN3, Length 549 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-204ENST00000478327 NID1P14543 1247 aa6.92□□□□□ -1.3
NECTIN3-204ENST00000478327 FCGRTP55899 365 aa6.92□□□□□ -1.3
NECTIN3-204ENST00000478327 COL9A3Q14050 684 aaPredicted RBP6.92□□□□□ -1.3
NECTIN3-204ENST00000478327 MSL1Q68DK7 614 aa6.92□□□□□ -1.3
NECTIN3-204ENST00000478327 DTHD1Q6ZMT9 781 aa6.92□□□□□ -1.3
NECTIN3-204ENST00000478327 WFDC8Q8IUA0 241 aa6.92□□□□□ -1.3
NECTIN3-204ENST00000478327 MAP4K3Q8IVH8 894 aa6.92□□□□□ -1.3
NECTIN3-204ENST00000478327 DTWD1Q8N5C7 304 aa6.92□□□□□ -1.3
NECTIN3-204ENST00000478327 ASAP3Q8TDY4 903 aa6.92□□□□□ -1.3
NECTIN3-204ENST00000478327 DCAF11Q8TEB1 546 aa6.92□□□□□ -1.3
NECTIN3-204ENST00000478327 CLEC4MQ9H2X3 399 aaPredicted RBP6.92□□□□□ -1.3
NECTIN3-204ENST00000478327 ZNF576Q9H609 170 aa6.92□□□□□ -1.3
NECTIN3-204ENST00000478327 H3BRJ5 948 aa6.91□□□□□ -1.3
NECTIN3-204ENST00000478327 RECKO95980 971 aa6.91□□□□□ -1.3
NECTIN3-204ENST00000478327 BAG6P46379 1132 aa6.91□□□□□ -1.3
NECTIN3-204ENST00000478327 GDF6Q6KF10 455 aaPredicted RBP6.91□□□□□ -1.3
NECTIN3-204ENST00000478327 MKL2Q9ULH7 1088 aa6.91□□□□□ -1.3
NECTIN3-204ENST00000478327 SPDYE3A6NKU9 549 aa6.9□□□□□ -1.3
NECTIN3-204ENST00000478327 METTL12A8MUP2 240 aa6.9□□□□□ -1.3
NECTIN3-204ENST00000478327 CTSHP09668 335 aa6.9□□□□□ -1.3
NECTIN3-204ENST00000478327 SPRED3Q2MJR0 410 aa6.9□□□□□ -1.3
NECTIN3-204ENST00000478327 FAM117BQ6P1L5 589 aa6.9□□□□□ -1.3
NECTIN3-204ENST00000478327 VN1R5Q7Z5H4 357 aa6.9□□□□□ -1.3
NECTIN3-204ENST00000478327 IL22RA1Q8N6P7 574 aa6.9□□□□□ -1.3
NECTIN3-204ENST00000478327 CEP44Q9C0F1 390 aa6.9□□□□□ -1.3
NECTIN3-204ENST00000478327 LACRTQ9GZZ8 138 aa6.9□□□□□ -1.3
NECTIN3-204ENST00000478327 SOX17Q9H6I2 414 aaPredicted RBP6.9□□□□□ -1.3
NECTIN3-204ENST00000478327 RRAGCQ9HB90 399 aa6.9□□□□□ -1.3
NECTIN3-204ENST00000478327 METTL5Q9NRN9 209 aaKnown RBP6.9□□□□□ -1.3
NECTIN3-204ENST00000478327 PPME1Q9Y570 386 aa6.9□□□□□ -1.3
NECTIN3-204ENST00000478327 USP31Q70CQ4 1352 aa6.9□□□□□ -1.31
NECTIN3-204ENST00000478327 GNB5O14775 395 aa6.89□□□□□ -1.31
NECTIN3-204ENST00000478327 EPHA1P21709 976 aa6.89□□□□□ -1.31
NECTIN3-204ENST00000478327 PIP4K2BP78356 416 aa6.89□□□□□ -1.31
NECTIN3-204ENST00000478327 PCDH1Q08174 1060 aa6.89□□□□□ -1.31
NECTIN3-204ENST00000478327 TAF1CQ15572 869 aaPredicted RBP6.89□□□□□ -1.31
NECTIN3-204ENST00000478327 LINC00114Q6XXX2 140 aa6.89□□□□□ -1.31
NECTIN3-204ENST00000478327 C8orf86Q6ZUL3 223 aa6.89□□□□□ -1.31
NECTIN3-204ENST00000478327 OSGEPQ9NPF4 335 aa6.89□□□□□ -1.31
NECTIN3-204ENST00000478327 SCAMP3O14828 347 aaKnown RBP6.88□□□□□ -1.31
NECTIN3-204ENST00000478327 B3GALT4O96024 378 aa6.88□□□□□ -1.31
NECTIN3-204ENST00000478327 RASSF7Q02833 373 aa6.88□□□□□ -1.31
NECTIN3-204ENST00000478327 IKBKEQ14164 716 aa6.88□□□□□ -1.31
NECTIN3-204ENST00000478327 ADAMTSL4Q6UY14 1074 aa6.88□□□□□ -1.31
NECTIN3-204ENST00000478327 SV2BQ7L1I2 683 aa6.88□□□□□ -1.31
NECTIN3-204ENST00000478327 PODNQ7Z5L7 613 aa6.88□□□□□ -1.31
NECTIN3-204ENST00000478327 DDX54Q8TDD1 881 aaKnown RBP6.88□□□□□ -1.31
NECTIN3-204ENST00000478327 NOC4LQ9BVI4 516 aaKnown RBP6.88□□□□□ -1.31
NECTIN3-204ENST00000478327 BACH2Q9BYV9 841 aa6.88□□□□□ -1.31
NECTIN3-204ENST00000478327 NOP53Q9NZM5 478 aaKnown RBP6.88□□□□□ -1.31
NECTIN3-204ENST00000478327 AKAP2Q9Y2D5 859 aa6.88□□□□□ -1.31
NECTIN3-204ENST00000478327 ESRRAP11474 423 aaPredicted RBP6.87□□□□□ -1.31
NECTIN3-204ENST00000478327 ARL4DP49703 201 aa6.87□□□□□ -1.31
NECTIN3-204ENST00000478327 TSNAXIP1Q2TAA8 658 aa6.87□□□□□ -1.31
NECTIN3-204ENST00000478327 LDLRAD1Q5T700 205 aa6.87□□□□□ -1.31
NECTIN3-204ENST00000478327 BEND7Q8N7W2 519 aaPredicted RBP6.87□□□□□ -1.31
NECTIN3-204ENST00000478327 KLHL23Q8NBE8 558 aa6.87□□□□□ -1.31
NECTIN3-204ENST00000478327 SH2B1Q9NRF2 756 aaPredicted RBP6.87□□□□□ -1.31
NECTIN3-204ENST00000478327 TTF2Q9UNY4 1162 aaKnown RBP6.87□□□□□ -1.31
NECTIN3-204ENST00000478327 RLBP1P12271 317 aa6.86□□□□□ -1.31
NECTIN3-204ENST00000478327 RAC1P63000 192 aa6.86□□□□□ -1.31
NECTIN3-204ENST00000478327 SNRPNP63162 240 aaKnown RBP6.86□□□□□ -1.31
NECTIN3-204ENST00000478327 PPP2R3AQ06190 1150 aa6.86□□□□□ -1.31
NECTIN3-204ENST00000478327 TMEM87AQ8NBN3 555 aa6.86□□□□□ -1.31
NECTIN3-204ENST00000478327 TRIM11Q96F44 468 aa6.86□□□□□ -1.31
NECTIN3-204ENST00000478327 SEC31BQ9NQW1 1179 aa6.86□□□□□ -1.31
NECTIN3-204ENST00000478327 TMEM39AQ9NV64 488 aa6.86□□□□□ -1.31
NECTIN3-204ENST00000478327 FAAP100Q0VG06 881 aa6.85□□□□□ -1.31
NECTIN3-204ENST00000478327 ZNF423Q2M1K9 1284 aa6.85□□□□□ -1.31
NECTIN3-204ENST00000478327 MEI1Q5TIA1 1274 aa6.85□□□□□ -1.31
NECTIN3-204ENST00000478327 ALYREFQ86V81 257 aaKnown RBP6.85□□□□□ -1.31
NECTIN3-204ENST00000478327 TMEM151AQ8N4L1 468 aa6.85□□□□□ -1.31
NECTIN3-204ENST00000478327 NECAB3Q96P71 396 aaPredicted RBP6.85□□□□□ -1.31
NECTIN3-204ENST00000478327 IGSF5Q9NSI5 407 aa6.85□□□□□ -1.31
NECTIN3-204ENST00000478327 USP35Q9P2H5 1018 aa6.85□□□□□ -1.31
NECTIN3-204ENST00000478327 LINC01387J3KSC0 135 aa6.84□□□□□ -1.31
NECTIN3-204ENST00000478327 SOX1O00570 391 aaPredicted RBP6.84□□□□□ -1.31
NECTIN3-204ENST00000478327 FSCN2O14926 492 aa6.84□□□□□ -1.31
NECTIN3-204ENST00000478327 GDF11O95390 407 aa6.84□□□□□ -1.31
NECTIN3-204ENST00000478327 TCF3P15923 654 aa6.84□□□□□ -1.31
NECTIN3-204ENST00000478327 ZNF76P36508 570 aa6.84□□□□□ -1.31
NECTIN3-204ENST00000478327 C19orf57Q0VDD7 668 aa6.84□□□□□ -1.31
NECTIN3-204ENST00000478327 AP3B2Q13367 1082 aa6.84□□□□□ -1.31
NECTIN3-204ENST00000478327 SETDB1Q15047 1291 aa6.84□□□□□ -1.31
NECTIN3-204ENST00000478327 TRAPPC3LQ5T215 181 aa6.84□□□□□ -1.31
NECTIN3-204ENST00000478327 FBXO11Q86XK2 927 aa6.84□□□□□ -1.31
NECTIN3-204ENST00000478327 DMRTC2Q8IXT2 367 aaPredicted RBP6.84□□□□□ -1.31
NECTIN3-204ENST00000478327 FMR1NBQ8N0W7 255 aaPredicted RBP6.84□□□□□ -1.31
NECTIN3-204ENST00000478327 GPN3Q9UHW5 284 aaPredicted RBP6.84□□□□□ -1.31
NECTIN3-204ENST00000478327 SAMM50Q9Y512 469 aa6.84□□□□□ -1.31
NECTIN3-204ENST00000478327 CNTNAP5Q8WYK1 1306 aa6.83□□□□□ -1.32
NECTIN3-204ENST00000478327 A0A0A0MRY4 1105 aa6.83□□□□□ -1.32
NECTIN3-204ENST00000478327 FANCCQ00597 558 aa6.83□□□□□ -1.32
NECTIN3-204ENST00000478327 PWP1Q13610 501 aa6.83□□□□□ -1.32
NECTIN3-204ENST00000478327 SUZ12Q15022 739 aaKnown RBP6.83□□□□□ -1.32
NECTIN3-204ENST00000478327 CCDC85BQ15834 202 aaPredicted RBP6.83□□□□□ -1.32
NECTIN3-204ENST00000478327 SCARA3Q6AZY7 606 aa6.83□□□□□ -1.32
NECTIN3-204ENST00000478327 TPTE2Q6XPS3 522 aa6.83□□□□□ -1.32
NECTIN3-204ENST00000478327 PLVAPQ9BX97 442 aa6.83□□□□□ -1.32
NECTIN3-204ENST00000478327 ENC1O14682 589 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms