RNA–Protein interactions for RNA: ENST00000478282.1

U2AF1-210, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 3,344 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-210ENST00000478282 MRPS27Q92552 414 aaKnown RBP17.32■□□□□ 0.36
U2AF1-210ENST00000478282 DBNLQ9UJU6 430 aaKnown RBP17.32■□□□□ 0.36
U2AF1-210ENST00000478282 PRAMEF22A3QJZ6 481 aa17.31■□□□□ 0.36
U2AF1-210ENST00000478282 IL2RBP14784 551 aa17.31■□□□□ 0.36
U2AF1-210ENST00000478282 MCMDC2Q4G0Z9 681 aa17.31■□□□□ 0.36
U2AF1-210ENST00000478282 RAPGEF4Q8WZA2 1011 aa17.31■□□□□ 0.36
U2AF1-210ENST00000478282 STRN4Q9NRL3 753 aa17.31■□□□□ 0.36
U2AF1-210ENST00000478282 NPHP1O15259 732 aa17.31■□□□□ 0.36
U2AF1-210ENST00000478282 DHX32Q7L7V1 743 aaKnown RBP17.31■□□□□ 0.36
U2AF1-210ENST00000478282 FBXW7Q969H0 707 aa17.31■□□□□ 0.36
U2AF1-210ENST00000478282 SEC62Q99442 399 aaKnown RBP17.31■□□□□ 0.36
U2AF1-210ENST00000478282 BPIFA3Q9BQP9 254 aa17.31■□□□□ 0.36
U2AF1-210ENST00000478282 PAPPAQ13219 1627 aa17.31■□□□□ 0.36
U2AF1-210ENST00000478282 KDM6AO15550 1401 aaPredicted RBP17.31■□□□□ 0.36
U2AF1-210ENST00000478282 SALL1Q9NSC2 1324 aa17.31■□□□□ 0.36
U2AF1-210ENST00000478282 IGKV5-2P06315 115 aa17.31■□□□□ 0.36
U2AF1-210ENST00000478282 NKX1-1Q15270 411 aaPredicted RBP17.31■□□□□ 0.36
U2AF1-210ENST00000478282 ARMCX5Q6P1M9 558 aa17.31■□□□□ 0.36
U2AF1-210ENST00000478282 SYT10Q6XYQ8 523 aa17.31■□□□□ 0.36
U2AF1-210ENST00000478282 ILDR1Q86SU0 546 aaPredicted RBP17.31■□□□□ 0.36
U2AF1-210ENST00000478282 TUBB4AP04350 444 aa17.3■□□□□ 0.36
U2AF1-210ENST00000478282 TMC6Q7Z403 805 aa17.3■□□□□ 0.36
U2AF1-210ENST00000478282 XPO4Q9C0E2 1151 aaKnown RBP17.3■□□□□ 0.36
U2AF1-210ENST00000478282 CHGBP05060 677 aa17.3■□□□□ 0.36
U2AF1-210ENST00000478282 APOBRQ0VD83 1088 aa17.3■□□□□ 0.36
U2AF1-210ENST00000478282 AIMP1Q12904 312 aaKnown RBP17.3■□□□□ 0.36
U2AF1-210ENST00000478282 DHX8Q14562 1220 aaKnown RBP17.3■□□□□ 0.36
U2AF1-210ENST00000478282 SDF4Q9BRK5 362 aa17.3■□□□□ 0.36
U2AF1-210ENST00000478282 DDX21Q9NR30 783 aaKnown RBP eCLIP17.3■□□□□ 0.36
U2AF1-210ENST00000478282 PCDHA7Q9UN72 937 aa17.3■□□□□ 0.36
U2AF1-210ENST00000478282 SMC2O95347 1197 aa17.29■□□□□ 0.36
U2AF1-210ENST00000478282 SFPQP23246 707 aaKnown RBP eCLIP17.29■□□□□ 0.36
U2AF1-210ENST00000478282 TNNI3KQ59H18 835 aa17.29■□□□□ 0.36
U2AF1-210ENST00000478282 LRRN4CLQ8ND94 238 aa17.29■□□□□ 0.36
U2AF1-210ENST00000478282 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP17.29■□□□□ 0.36
U2AF1-210ENST00000478282 NDUFB9Q9Y6M9 179 aa17.29■□□□□ 0.36
U2AF1-210ENST00000478282 FPGT-TNNI3KV9GXZ4 949 aa17.29■□□□□ 0.36
U2AF1-210ENST00000478282 TNS2Q63HR2 1409 aa17.29■□□□□ 0.36
U2AF1-210ENST00000478282 TIGD1Q96MW7 591 aa17.29■□□□□ 0.36
U2AF1-210ENST00000478282 IFNKQ9P0W0 207 aa17.29■□□□□ 0.36
U2AF1-210ENST00000478282 KIAA1468Q9P260 1216 aa17.29■□□□□ 0.36
U2AF1-210ENST00000478282 FHOD1Q9Y613 1164 aa17.29■□□□□ 0.36
U2AF1-210ENST00000478282 A0A1W2PQ27 194 aa17.29■□□□□ 0.36
U2AF1-210ENST00000478282 A0A1W2PQ64 194 aa17.29■□□□□ 0.36
U2AF1-210ENST00000478282 A0A1W2PQD8 194 aa17.29■□□□□ 0.36
U2AF1-210ENST00000478282 PHKG2P15735 406 aa17.29■□□□□ 0.36
U2AF1-210ENST00000478282 CLCN6P51797 869 aa17.29■□□□□ 0.36
U2AF1-210ENST00000478282 DPCR1Q3MIW9 517 aa17.29■□□□□ 0.36
U2AF1-210ENST00000478282 ADALQ6DHV7 355 aa17.29■□□□□ 0.36
U2AF1-210ENST00000478282 NOL10Q9BSC4 688 aaKnown RBP17.29■□□□□ 0.36
U2AF1-210ENST00000478282 CDCA7Q9BWT1 371 aaPredicted RBP17.29■□□□□ 0.36
U2AF1-210ENST00000478282 AGXT2Q9BYV1 514 aa17.29■□□□□ 0.36
U2AF1-210ENST00000478282 TMEM51Q9NW97 253 aa17.29■□□□□ 0.36
U2AF1-210ENST00000478282 CYP27B1O15528 508 aa17.28■□□□□ 0.36
U2AF1-210ENST00000478282 NRDCO43847 1150 aa17.28■□□□□ 0.36
U2AF1-210ENST00000478282 EPHA10Q5JZY3 1008 aa17.28■□□□□ 0.36
U2AF1-210ENST00000478282 DNAJC2Q99543 621 aaKnown RBP17.28■□□□□ 0.36
U2AF1-210ENST00000478282 COPRSQ9NQ92 184 aa17.28■□□□□ 0.36
U2AF1-210ENST00000478282 RTEL1Q9NZ71 1219 aa17.28■□□□□ 0.36
U2AF1-210ENST00000478282 ERICH4A6NGS2 130 aa17.28■□□□□ 0.36
U2AF1-210ENST00000478282 CCT2P78371 535 aaKnown RBP17.28■□□□□ 0.36
U2AF1-210ENST00000478282 GUCY1B3Q02153 619 aa17.28■□□□□ 0.36
U2AF1-210ENST00000478282 ZRSR1Q15695 479 aaKnown RBP17.28■□□□□ 0.36
U2AF1-210ENST00000478282 C1orf141Q5JVX7 400 aa17.28■□□□□ 0.36
U2AF1-210ENST00000478282 CALCOCO1Q9P1Z2 691 aa17.28■□□□□ 0.36
U2AF1-210ENST00000478282 A0A1B0GVL5 298 aa17.27■□□□□ 0.36
U2AF1-210ENST00000478282 EXOSC10Q01780 885 aaKnown RBP17.27■□□□□ 0.36
U2AF1-210ENST00000478282 C8orf37Q96NL8 207 aa17.27■□□□□ 0.36
U2AF1-210ENST00000478282 SH3TC1Q8TE82 1336 aa17.27■□□□□ 0.36
U2AF1-210ENST00000478282 NEURL1BA8MQ27 555 aa17.27■□□□□ 0.36
U2AF1-210ENST00000478282 RIC3Q7Z5B4 369 aa17.27■□□□□ 0.36
U2AF1-210ENST00000478282 HAUS7Q99871 368 aa17.27■□□□□ 0.36
U2AF1-210ENST00000478282 NCOA5Q9HCD5 579 aaKnown RBP17.27■□□□□ 0.36
U2AF1-210ENST00000478282 NDUFA8P51970 172 aa17.27■□□□□ 0.35
U2AF1-210ENST00000478282 TFCP2Q12800 502 aa17.27■□□□□ 0.35
U2AF1-210ENST00000478282 PDIA6Q15084 440 aa17.27■□□□□ 0.35
U2AF1-210ENST00000478282 ARHGAP29Q52LW3 1261 aa17.27■□□□□ 0.35
U2AF1-210ENST00000478282 BBXQ8WY36 941 aaPredicted RBP17.27■□□□□ 0.35
U2AF1-210ENST00000478282 SYTL4Q96C24 671 aaPredicted RBP17.27■□□□□ 0.35
U2AF1-210ENST00000478282 CARMIL3Q8ND23 1372 aa17.27■□□□□ 0.35
U2AF1-210ENST00000478282 PNMA6AP0CW24 399 aaPredicted RBP17.26■□□□□ 0.35
U2AF1-210ENST00000478282 GTF2E1P29083 439 aaPredicted RBP17.26■□□□□ 0.35
U2AF1-210ENST00000478282 GCKRQ14397 625 aa17.26■□□□□ 0.35
U2AF1-210ENST00000478282 NGLY1Q96IV0 654 aa17.26■□□□□ 0.35
U2AF1-210ENST00000478282 NEDD4P46934 1319 aa17.26■□□□□ 0.35
U2AF1-210ENST00000478282 PCDH11XQ9BZA7 1347 aa17.26■□□□□ 0.35
U2AF1-210ENST00000478282 PCDH11YQ9BZA8 1340 aa17.26■□□□□ 0.35
U2AF1-210ENST00000478282 CYP2C19P33261 490 aa17.26■□□□□ 0.35
U2AF1-210ENST00000478282 TPM4P67936 248 aa17.26■□□□□ 0.35
U2AF1-210ENST00000478282 NEXNQ0ZGT2 675 aa17.26■□□□□ 0.35
U2AF1-210ENST00000478282 UBR2Q8IWV8 1755 aa17.26■□□□□ 0.35
U2AF1-210ENST00000478282 ONECUT3O60422 494 aaPredicted RBP17.26■□□□□ 0.35
U2AF1-210ENST00000478282 DDX46Q7L014 1031 aaKnown RBP17.26■□□□□ 0.35
U2AF1-210ENST00000478282 ZCRB1Q8TBF4 217 aaKnown RBP17.26■□□□□ 0.35
U2AF1-210ENST00000478282 PHLPP2Q6ZVD8 1323 aa17.25■□□□□ 0.35
U2AF1-210ENST00000478282 RFX5P48382 616 aaPredicted RBP17.25■□□□□ 0.35
U2AF1-210ENST00000478282 ETF1P62495 437 aaKnown RBP17.25■□□□□ 0.35
U2AF1-210ENST00000478282 IFNL2Q8IZJ0 200 aa17.25■□□□□ 0.35
U2AF1-210ENST00000478282 KBTBD3Q8NAB2 608 aa17.25■□□□□ 0.35
U2AF1-210ENST00000478282 LINC00301Q8NCQ3 95 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms