RNA–Protein interactions for RNA: ENST00000478075.1

CALD1-218, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 193 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-218ENST00000478075 GLI1P08151 1106 aa5.37□□□□□ -1.55
CALD1-218ENST00000478075 NLRP12P59046 1061 aa5.37□□□□□ -1.55
CALD1-218ENST00000478075 HYAL2Q12891 473 aa5.37□□□□□ -1.55
CALD1-218ENST00000478075 BNIP3Q12983 259 aa5.37□□□□□ -1.55
CALD1-218ENST00000478075 NFATC2IPQ8NCF5 419 aa5.37□□□□□ -1.55
CALD1-218ENST00000478075 SLC24A3Q9HC58 644 aa5.37□□□□□ -1.55
CALD1-218ENST00000478075 RTEL1Q9NZ71 1219 aa5.37□□□□□ -1.55
CALD1-218ENST00000478075 RTCBQ9Y3I0 505 aaKnown RBP5.37□□□□□ -1.55
CALD1-218ENST00000478075 OVOL3O00110 214 aa5.36□□□□□ -1.55
CALD1-218ENST00000478075 MED14OSP0DP75 135 aa5.36□□□□□ -1.55
CALD1-218ENST00000478075 WASHC4Q2M389 1173 aa5.36□□□□□ -1.55
CALD1-218ENST00000478075 ATAD2Q6PL18 1390 aa5.36□□□□□ -1.55
CALD1-218ENST00000478075 CNTNAP4Q9C0A0 1308 aa5.35□□□□□ -1.55
CALD1-218ENST00000478075 MICAL2O94851 1124 aa5.35□□□□□ -1.55
CALD1-218ENST00000478075 CELA3BP08861 270 aa5.35□□□□□ -1.55
CALD1-218ENST00000478075 EPHA1P21709 976 aa5.35□□□□□ -1.55
CALD1-218ENST00000478075 NFKB2Q00653 900 aa5.35□□□□□ -1.55
CALD1-218ENST00000478075 CCDC102BQ68D86 513 aa5.35□□□□□ -1.55
CALD1-218ENST00000478075 CDPF1Q6NVV7 123 aa5.35□□□□□ -1.55
CALD1-218ENST00000478075 PRR23BQ6ZRT6 265 aa5.35□□□□□ -1.55
CALD1-218ENST00000478075 CRIM1Q9NZV1 1036 aa5.35□□□□□ -1.55
CALD1-218ENST00000478075 A0A0G2JLL6 359 aaPredicted RBP5.34□□□□□ -1.55
CALD1-218ENST00000478075 GLDCP23378 1020 aa5.34□□□□□ -1.55
CALD1-218ENST00000478075 HAP1P54257 671 aaPredicted RBP5.34□□□□□ -1.55
CALD1-218ENST00000478075 OGFOD3Q6PK18 319 aa5.34□□□□□ -1.55
CALD1-218ENST00000478075 ATG14Q6ZNE5 492 aa5.34□□□□□ -1.55
CALD1-218ENST00000478075 CRELD1Q96HD1 420 aa5.34□□□□□ -1.55
CALD1-218ENST00000478075 KRTAP10-2P60368 255 aa5.33□□□□□ -1.56
CALD1-218ENST00000478075 NCOA4Q13772 614 aa5.33□□□□□ -1.56
CALD1-218ENST00000478075 NLRP13Q86W25 1043 aa5.33□□□□□ -1.56
CALD1-218ENST00000478075 IQCJ-SCHIP1C9J366 451 aaPredicted RBP5.32□□□□□ -1.56
CALD1-218ENST00000478075 C21orf2O43822 256 aa5.32□□□□□ -1.56
CALD1-218ENST00000478075 C19orf57Q0VDD7 668 aa5.32□□□□□ -1.56
CALD1-218ENST00000478075 TMEM67Q5HYA8 995 aa5.32□□□□□ -1.56
CALD1-218ENST00000478075 HRASLS5Q96KN8 279 aa5.32□□□□□ -1.56
CALD1-218ENST00000478075 BMP7P18075 431 aa5.31□□□□□ -1.56
CALD1-218ENST00000478075 LINC00310P59036 64 aa5.31□□□□□ -1.56
CALD1-218ENST00000478075 ATP11AP98196 1134 aa5.31□□□□□ -1.56
CALD1-218ENST00000478075 IFI16Q16666 785 aaKnown RBP5.31□□□□□ -1.56
CALD1-218ENST00000478075 SKOR2Q2VWA4 1001 aaPredicted RBP5.31□□□□□ -1.56
CALD1-218ENST00000478075 EXOSC6Q5RKV6 272 aaKnown RBP5.31□□□□□ -1.56
CALD1-218ENST00000478075 C2CD4AQ8NCU7 369 aaPredicted RBP5.31□□□□□ -1.56
CALD1-218ENST00000478075 OR13H1Q8NG92 308 aa5.31□□□□□ -1.56
CALD1-218ENST00000478075 CHMP7Q8WUX9 453 aaPredicted RBP5.31□□□□□ -1.56
CALD1-218ENST00000478075 ZMYND15Q9H091 742 aa5.31□□□□□ -1.56
CALD1-218ENST00000478075 MKNK2Q9HBH9 465 aa5.31□□□□□ -1.56
CALD1-218ENST00000478075 SOX4Q06945 474 aaPredicted RBP5.3□□□□□ -1.56
CALD1-218ENST00000478075 VSIG10Q8N0Z9 540 aa5.3□□□□□ -1.56
CALD1-218ENST00000478075 CMTR1Q8N1G2 835 aaKnown RBP5.3□□□□□ -1.56
CALD1-218ENST00000478075 LARGE2Q8N3Y3 721 aa5.3□□□□□ -1.56
CALD1-218ENST00000478075 SCG3Q8WXD2 468 aaKnown RBP5.3□□□□□ -1.56
CALD1-218ENST00000478075 PBX4Q9BYU1 374 aa5.3□□□□□ -1.56
CALD1-218ENST00000478075 SH2B1Q9NRF2 756 aaPredicted RBP5.3□□□□□ -1.56
CALD1-218ENST00000478075 SMG5Q9UPR3 1016 aaKnown RBP5.3□□□□□ -1.56
CALD1-218ENST00000478075 TMEM265A0A087WTH1 108 aa5.29□□□□□ -1.56
CALD1-218ENST00000478075 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.29□□□□□ -1.56
CALD1-218ENST00000478075 PALM3A6NDB9 673 aaPredicted RBP5.29□□□□□ -1.56
CALD1-218ENST00000478075 VAC14Q08AM6 782 aa5.29□□□□□ -1.56
CALD1-218ENST00000478075 AOC3Q16853 763 aa5.29□□□□□ -1.56
CALD1-218ENST00000478075 SPATS1Q496A3 300 aa5.29□□□□□ -1.56
CALD1-218ENST00000478075 KIRREL1Q96J84 757 aa5.29□□□□□ -1.56
CALD1-218ENST00000478075 TBC1D2BQ9UPU7 963 aa5.29□□□□□ -1.56
CALD1-218ENST00000478075 MYRFQ9Y2G1 1151 aa5.29□□□□□ -1.56
CALD1-218ENST00000478075 SCNN1AP37088 669 aa5.28□□□□□ -1.56
CALD1-218ENST00000478075 DGKZQ13574 1117 aa5.28□□□□□ -1.56
CALD1-218ENST00000478075 C11orf91Q3C1V1 193 aa5.28□□□□□ -1.56
CALD1-218ENST00000478075 HP1BP3Q5SSJ5 553 aaPredicted RBP5.28□□□□□ -1.56
CALD1-218ENST00000478075 TSEN2Q8NCE0 465 aaKnown RBP5.28□□□□□ -1.56
CALD1-218ENST00000478075 SLC7A3Q8WY07 619 aa5.28□□□□□ -1.56
CALD1-218ENST00000478075 RASSF4Q9H2L5 321 aa5.28□□□□□ -1.56
CALD1-218ENST00000478075 EPB41L4BQ9H329 900 aa5.28□□□□□ -1.56
CALD1-218ENST00000478075 NSUN3Q9H649 340 aaKnown RBP5.28□□□□□ -1.56
CALD1-218ENST00000478075 KLK14Q9P0G3 267 aa5.28□□□□□ -1.56
CALD1-218ENST00000478075 NFICP08651 508 aa5.27□□□□□ -1.57
CALD1-218ENST00000478075 IRF5Q13568 498 aa5.27□□□□□ -1.57
CALD1-218ENST00000478075 RGL4Q8IZJ4 473 aa5.27□□□□□ -1.57
CALD1-218ENST00000478075 PLD6Q8N2A8 252 aaKnown RBP5.27□□□□□ -1.57
CALD1-218ENST00000478075 KCNC2Q96PR1 638 aa5.27□□□□□ -1.57
CALD1-218ENST00000478075 SLC26A8Q96RN1 970 aa5.27□□□□□ -1.57
CALD1-218ENST00000478075 CTNND2Q9UQB3 1225 aa5.27□□□□□ -1.57
CALD1-218ENST00000478075 SRFP11831 508 aa5.26□□□□□ -1.57
CALD1-218ENST00000478075 DRD2P14416 443 aa5.26□□□□□ -1.57
CALD1-218ENST00000478075 ARHGAP27Q6ZUM4 889 aa5.26□□□□□ -1.57
CALD1-218ENST00000478075 USP26Q9BXU7 913 aa5.26□□□□□ -1.57
CALD1-218ENST00000478075 IRF2BPLQ9H1B7 796 aa5.26□□□□□ -1.57
CALD1-218ENST00000478075 SEMA6CQ9H3T2 930 aa5.26□□□□□ -1.57
CALD1-218ENST00000478075 DCP1AQ9NPI6 582 aaPredicted RBP5.26□□□□□ -1.57
CALD1-218ENST00000478075 SRRDQ9UH36 339 aa5.26□□□□□ -1.57
CALD1-218ENST00000478075 LOC100289279A0A1B0GTE1 492 aa5.25□□□□□ -1.57
CALD1-218ENST00000478075 OPLAHO14841 1288 aa5.25□□□□□ -1.57
CALD1-218ENST00000478075 ZBTB7BO15156 539 aaPredicted RBP5.25□□□□□ -1.57
CALD1-218ENST00000478075 KIF4AO95239 1232 aa5.25□□□□□ -1.57
CALD1-218ENST00000478075 RASA1P20936 1047 aa5.25□□□□□ -1.57
CALD1-218ENST00000478075 DIRC2Q96SL1 478 aa5.25□□□□□ -1.57
CALD1-218ENST00000478075 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.25□□□□□ -1.57
CALD1-218ENST00000478075 USP17L5A8MUK1 530 aa5.24□□□□□ -1.57
CALD1-218ENST00000478075 PIK3CDO00329 1044 aa5.24□□□□□ -1.57
CALD1-218ENST00000478075 RAB6AP20340 208 aa5.24□□□□□ -1.57
CALD1-218ENST00000478075 CYFIP1Q7L576 1253 aa5.24□□□□□ -1.57
CALD1-218ENST00000478075 SIX5Q8N196 739 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms