RNA–Protein interactions for RNA: ENST00000478050.1

SF3B6-202, Transcript of splicing factor 3b subunit 6, humanhuman

TSL 2

Gene SF3B6, Length 720 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B6-202ENST00000478050 AHDC1Q5TGY3 1603 aaPredicted RBP6.28□□□□□ -1.4
SF3B6-202ENST00000478050 TOPAZ1Q8N9V7 1692 aa6.27□□□□□ -1.41
SF3B6-202ENST00000478050 TECPR2O15040 1411 aa6.27□□□□□ -1.41
SF3B6-202ENST00000478050 EDC4Q6P2E9 1401 aaKnown RBP6.27□□□□□ -1.41
SF3B6-202ENST00000478050 U2SURPO15042 1029 aaKnown RBP6.27□□□□□ -1.41
SF3B6-202ENST00000478050 BNIP3LO60238 219 aa6.27□□□□□ -1.41
SF3B6-202ENST00000478050 DIAPH1O60610 1272 aaKnown RBP6.27□□□□□ -1.41
SF3B6-202ENST00000478050 DEKP35659 375 aaKnown RBP6.27□□□□□ -1.41
SF3B6-202ENST00000478050 TMPOP42166 694 aaKnown RBP6.27□□□□□ -1.41
SF3B6-202ENST00000478050 DGKGP49619 791 aa6.27□□□□□ -1.41
SF3B6-202ENST00000478050 RGS3P49796 1198 aa6.27□□□□□ -1.41
SF3B6-202ENST00000478050 UBAP2LQ14157 1087 aaKnown RBP6.27□□□□□ -1.41
SF3B6-202ENST00000478050 ZKSCAN2Q63HK3 967 aa6.27□□□□□ -1.41
SF3B6-202ENST00000478050 SKAP1Q86WV1 359 aa6.27□□□□□ -1.41
SF3B6-202ENST00000478050 FRAT1Q92837 279 aaPredicted RBP6.27□□□□□ -1.41
SF3B6-202ENST00000478050 EID1Q9Y6B2 187 aa6.27□□□□□ -1.41
SF3B6-202ENST00000478050 NRKQ7Z2Y5 1582 aa6.27□□□□□ -1.41
SF3B6-202ENST00000478050 CPSF1Q10570 1443 aaKnown RBP6.26□□□□□ -1.41
SF3B6-202ENST00000478050 MYCP01106 439 aaPredicted RBP6.26□□□□□ -1.41
SF3B6-202ENST00000478050 IL2RAP01589 272 aa6.26□□□□□ -1.41
SF3B6-202ENST00000478050 IGHDP01880 384 aa6.26□□□□□ -1.41
SF3B6-202ENST00000478050 NEFMP07197 916 aa6.26□□□□□ -1.41
SF3B6-202ENST00000478050 MVPQ14764 893 aaKnown RBP6.26□□□□□ -1.41
SF3B6-202ENST00000478050 C4orf17Q53FE4 359 aa6.26□□□□□ -1.41
SF3B6-202ENST00000478050 TXNDC2Q86VQ3 553 aa6.26□□□□□ -1.41
SF3B6-202ENST00000478050 TNS4Q8IZW8 715 aa6.26□□□□□ -1.41
SF3B6-202ENST00000478050 SIRT1Q96EB6 747 aa6.26□□□□□ -1.41
SF3B6-202ENST00000478050 TRIM34Q9BYJ4 488 aa6.26□□□□□ -1.41
SF3B6-202ENST00000478050 RWDD1Q9H446 243 aaPredicted RBP6.26□□□□□ -1.41
SF3B6-202ENST00000478050 ZNF330Q9Y3S2 320 aaPredicted RBP6.26□□□□□ -1.41
SF3B6-202ENST00000478050 PPIP5K1Q6PFW1 1433 aa6.25□□□□□ -1.41
SF3B6-202ENST00000478050 NALCNQ8IZF0 1738 aa6.25□□□□□ -1.41
SF3B6-202ENST00000478050 FMN2Q9NZ56 1722 aa6.25□□□□□ -1.41
SF3B6-202ENST00000478050 RAD21O60216 631 aa6.25□□□□□ -1.41
SF3B6-202ENST00000478050 PDIA4P13667 645 aaKnown RBP6.25□□□□□ -1.41
SF3B6-202ENST00000478050 RFC5P40937 340 aa6.25□□□□□ -1.41
SF3B6-202ENST00000478050 FIGNL1Q6PIW4 674 aa6.25□□□□□ -1.41
SF3B6-202ENST00000478050 CHSY3Q70JA7 882 aa6.25□□□□□ -1.41
SF3B6-202ENST00000478050 NBPF11Q86T75 865 aa6.25□□□□□ -1.41
SF3B6-202ENST00000478050 FTSJ3Q8IY81 847 aaKnown RBP6.25□□□□□ -1.41
SF3B6-202ENST00000478050 DZIP1LQ8IYY4 767 aaKnown RBP6.25□□□□□ -1.41
SF3B6-202ENST00000478050 LRRC59Q96AG4 307 aaKnown RBP6.25□□□□□ -1.41
SF3B6-202ENST00000478050 POM121Q96HA1 1249 aa6.25□□□□□ -1.41
SF3B6-202ENST00000478050 NDFIP2Q9NV92 336 aa6.25□□□□□ -1.41
SF3B6-202ENST00000478050 CABP1Q9NZU7 370 aa6.25□□□□□ -1.41
SF3B6-202ENST00000478050 AATKQ6ZMQ8 1374 aa6.25□□□□□ -1.41
SF3B6-202ENST00000478050 EP400Q96L91 3159 aa6.25□□□□□ -1.41
SF3B6-202ENST00000478050 KIF16BQ96L93 1317 aa6.25□□□□□ -1.41
SF3B6-202ENST00000478050 IPO8O15397 1037 aaKnown RBP6.24□□□□□ -1.41
SF3B6-202ENST00000478050 RLBP1P12271 317 aa6.24□□□□□ -1.41
SF3B6-202ENST00000478050 ADH6P28332 368 aa6.24□□□□□ -1.41
SF3B6-202ENST00000478050 RIPK4P57078 832 aa6.24□□□□□ -1.41
SF3B6-202ENST00000478050 CALD1Q05682 793 aaKnown RBP6.24□□□□□ -1.41
SF3B6-202ENST00000478050 EXOSC9Q06265 439 aaKnown RBP6.24□□□□□ -1.41
SF3B6-202ENST00000478050 ALDH1L2Q3SY69 923 aa6.24□□□□□ -1.41
SF3B6-202ENST00000478050 ESCO1Q5FWF5 840 aa6.24□□□□□ -1.41
SF3B6-202ENST00000478050 ZNF428Q96B54 188 aa6.24□□□□□ -1.41
SF3B6-202ENST00000478050 XAGE2Q96GT9 111 aa6.24□□□□□ -1.41
SF3B6-202ENST00000478050 PLVAPQ9BX97 442 aa6.24□□□□□ -1.41
SF3B6-202ENST00000478050 SMC4Q9NTJ3 1288 aa6.24□□□□□ -1.41
SF3B6-202ENST00000478050 DDX19BQ9UMR2 479 aa6.24□□□□□ -1.41
SF3B6-202ENST00000478050 ATRNO75882 1429 aa6.24□□□□□ -1.41
SF3B6-202ENST00000478050 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.23□□□□□ -1.41
SF3B6-202ENST00000478050 CEP350Q5VT06 3117 aa6.23□□□□□ -1.41
SF3B6-202ENST00000478050 SPATA31C1P0DKV0 1188 aa6.23□□□□□ -1.41
SF3B6-202ENST00000478050 ATF3P18847 181 aa6.23□□□□□ -1.41
SF3B6-202ENST00000478050 NR1H3Q13133 447 aa6.23□□□□□ -1.41
SF3B6-202ENST00000478050 TMEM259Q4ZIN3 620 aa6.23□□□□□ -1.41
SF3B6-202ENST00000478050 ATF7IPQ6VMQ6 1270 aa6.23□□□□□ -1.41
SF3B6-202ENST00000478050 TSR2Q969E8 191 aaKnown RBP6.23□□□□□ -1.41
SF3B6-202ENST00000478050 BCL2L13Q9BXK5 485 aa6.23□□□□□ -1.41
SF3B6-202ENST00000478050 ZCCHC2Q9C0B9 1178 aaKnown RBP6.23□□□□□ -1.41
SF3B6-202ENST00000478050 SPON1Q9HCB6 807 aa6.23□□□□□ -1.41
SF3B6-202ENST00000478050 ZFP64Q9NPA5 681 aa6.23□□□□□ -1.41
SF3B6-202ENST00000478050 POLKQ9UBT6 870 aa6.23□□□□□ -1.41
SF3B6-202ENST00000478050 LAS1LQ9Y4W2 734 aaKnown RBP6.23□□□□□ -1.41
SF3B6-202ENST00000478050 PCDHGC4Q9Y5F7 938 aa6.23□□□□□ -1.41
SF3B6-202ENST00000478050 APBA3O96018 575 aa6.22□□□□□ -1.41
SF3B6-202ENST00000478050 HSPA6P17066 643 aa6.22□□□□□ -1.41
SF3B6-202ENST00000478050 LMOD3Q0VAK6 560 aa6.22□□□□□ -1.41
SF3B6-202ENST00000478050 HDAC1Q13547 482 aaPredicted RBP6.22□□□□□ -1.41
SF3B6-202ENST00000478050 BECN1Q14457 450 aa6.22□□□□□ -1.41
SF3B6-202ENST00000478050 NFE2L2Q16236 605 aa6.22□□□□□ -1.41
SF3B6-202ENST00000478050 RSPO4Q2I0M5 234 aaPredicted RBP6.22□□□□□ -1.41
SF3B6-202ENST00000478050 TBC1D9Q6ZT07 1266 aa6.22□□□□□ -1.41
SF3B6-202ENST00000478050 WAPLQ7Z5K2 1190 aa6.22□□□□□ -1.41
SF3B6-202ENST00000478050 RHBDD1Q8TEB9 315 aa6.22□□□□□ -1.41
SF3B6-202ENST00000478050 SSH1Q8WYL5 1049 aa6.22□□□□□ -1.41
SF3B6-202ENST00000478050 CCDC97Q96F63 343 aaPredicted RBP6.22□□□□□ -1.41
SF3B6-202ENST00000478050 FHDC1Q9C0D6 1143 aaPredicted RBP6.22□□□□□ -1.41
SF3B6-202ENST00000478050 BCL11AQ9H165 835 aa6.22□□□□□ -1.41
SF3B6-202ENST00000478050 CRISPLD1Q9H336 500 aa6.22□□□□□ -1.41
SF3B6-202ENST00000478050 CHMP4BQ9H444 224 aaKnown RBP6.22□□□□□ -1.41
SF3B6-202ENST00000478050 UPF2Q9HAU5 1272 aaKnown RBP6.22□□□□□ -1.41
SF3B6-202ENST00000478050 TNNQ9UQP3 1299 aa6.22□□□□□ -1.41
SF3B6-202ENST00000478050 DIP2AQ14689 1571 aa6.22□□□□□ -1.41
SF3B6-202ENST00000478050 USP19O94966 1318 aa6.22□□□□□ -1.41
SF3B6-202ENST00000478050 RGPD1P0DJD0 1748 aa6.22□□□□□ -1.41
SF3B6-202ENST00000478050 ARHGAP23Q9P227 1491 aa6.22□□□□□ -1.41
SF3B6-202ENST00000478050 METP08581 1390 aa6.21□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms