RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 PRUNE2Q8WUY3 3088 aa12.65□□□□□ -0.38
SMARCB1-206ENST00000477836 GNRH1P01148 92 aa12.65□□□□□ -0.38
SMARCB1-206ENST00000477836 PRMT2P55345 433 aa12.65□□□□□ -0.38
SMARCB1-206ENST00000477836 GPR153Q6NV75 609 aa12.65□□□□□ -0.38
SMARCB1-206ENST00000477836 PHF6Q8IWS0 365 aaKnown RBP eCLIP12.65□□□□□ -0.38
SMARCB1-206ENST00000477836 COA1Q9GZY4 146 aa12.65□□□□□ -0.38
SMARCB1-206ENST00000477836 RNF208Q9H0X6 261 aa12.65□□□□□ -0.38
SMARCB1-206ENST00000477836 CHPF2Q9P2E5 772 aa12.65□□□□□ -0.38
SMARCB1-206ENST00000477836 ZNF804BA4D1E1 1349 aa12.64□□□□□ -0.39
SMARCB1-206ENST00000477836 CLRN2A0PK11 232 aa12.64□□□□□ -0.39
SMARCB1-206ENST00000477836 WDHD1O75717 1129 aaPredicted RBP12.64□□□□□ -0.39
SMARCB1-206ENST00000477836 FARP2O94887 1054 aaPredicted RBP12.64□□□□□ -0.39
SMARCB1-206ENST00000477836 GJB1P08034 283 aa12.64□□□□□ -0.39
SMARCB1-206ENST00000477836 CCL5P13501 91 aa12.64□□□□□ -0.39
SMARCB1-206ENST00000477836 ZBTB38Q8NAP3 1195 aaPredicted RBP12.64□□□□□ -0.39
SMARCB1-206ENST00000477836 CNKSR2Q8WXI2 1034 aa12.64□□□□□ -0.39
SMARCB1-206ENST00000477836 VEZTQ9HBM0 779 aa12.64□□□□□ -0.39
SMARCB1-206ENST00000477836 PCDHAC2Q9Y5I4 1007 aa12.64□□□□□ -0.39
SMARCB1-206ENST00000477836 OTOFQ9HC10 1997 aa12.63□□□□□ -0.39
SMARCB1-206ENST00000477836 TLR2O60603 784 aa12.63□□□□□ -0.39
SMARCB1-206ENST00000477836 HSP90B1P14625 803 aaKnown RBP12.63□□□□□ -0.39
SMARCB1-206ENST00000477836 PPP2R1AP30153 589 aa12.63□□□□□ -0.39
SMARCB1-206ENST00000477836 GRK4P32298 578 aa12.63□□□□□ -0.39
SMARCB1-206ENST00000477836 CCT4P50991 539 aaKnown RBP12.63□□□□□ -0.39
SMARCB1-206ENST00000477836 GTF2A2P52657 109 aa12.63□□□□□ -0.39
SMARCB1-206ENST00000477836 GTF2IP78347 998 aa12.63□□□□□ -0.39
SMARCB1-206ENST00000477836 TXNRD3Q86VQ6 643 aa12.63□□□□□ -0.39
SMARCB1-206ENST00000477836 RAET1EQ8TD07 263 aa12.63□□□□□ -0.39
SMARCB1-206ENST00000477836 MTMR10Q9NXD2 777 aa12.63□□□□□ -0.39
SMARCB1-206ENST00000477836 BIN2Q9UBW5 565 aaPredicted RBP12.63□□□□□ -0.39
SMARCB1-206ENST00000477836 RIPOR2Q9Y4F9 1068 aa12.63□□□□□ -0.39
SMARCB1-206ENST00000477836 ECM29Q5VYK3 1845 aa12.62□□□□□ -0.39
SMARCB1-206ENST00000477836 MYO1BO43795 1136 aa12.62□□□□□ -0.39
SMARCB1-206ENST00000477836 PDE8AO60658 829 aa12.62□□□□□ -0.39
SMARCB1-206ENST00000477836 TRIM28Q13263 835 aaKnown RBP12.62□□□□□ -0.39
SMARCB1-206ENST00000477836 DIEXFQ68CQ4 756 aaKnown RBP12.62□□□□□ -0.39
SMARCB1-206ENST00000477836 PLEKHF1Q96S99 279 aa12.62□□□□□ -0.39
SMARCB1-206ENST00000477836 PRDM6Q9NQX0 595 aa12.62□□□□□ -0.39
SMARCB1-206ENST00000477836 MINPP1Q9UNW1 487 aa12.62□□□□□ -0.39
SMARCB1-206ENST00000477836 PSMC4P43686 418 aa12.61□□□□□ -0.39
SMARCB1-206ENST00000477836 RASA3Q14644 834 aa12.61□□□□□ -0.39
SMARCB1-206ENST00000477836 KRT24Q2M2I5 525 aa12.61□□□□□ -0.39
SMARCB1-206ENST00000477836 MTMR14Q8NCE2 650 aa12.61□□□□□ -0.39
SMARCB1-206ENST00000477836 U2AF1L4Q8WU68 220 aaKnown RBP12.61□□□□□ -0.39
SMARCB1-206ENST00000477836 JARID2Q92833 1246 aaPredicted RBP12.61□□□□□ -0.39
SMARCB1-206ENST00000477836 TRIM47Q96LD4 638 aa12.61□□□□□ -0.39
SMARCB1-206ENST00000477836 SRRDQ9UH36 339 aa12.61□□□□□ -0.39
SMARCB1-206ENST00000477836 SPEF2Q9C093 1822 aa12.6□□□□□ -0.39
SMARCB1-206ENST00000477836 F8W031 263 aaPredicted RBP12.6□□□□□ -0.39
SMARCB1-206ENST00000477836 OSBPP22059 807 aa12.6□□□□□ -0.39
SMARCB1-206ENST00000477836 HOXD10P28358 340 aa12.6□□□□□ -0.39
SMARCB1-206ENST00000477836 CTGFP29279 349 aa12.6□□□□□ -0.39
SMARCB1-206ENST00000477836 BMP8BP34820 402 aa12.6□□□□□ -0.39
SMARCB1-206ENST00000477836 UBXN2AP68543 259 aa12.6□□□□□ -0.39
SMARCB1-206ENST00000477836 CFAP100Q494V2 611 aa12.6□□□□□ -0.39
SMARCB1-206ENST00000477836 HDGFL1Q5TGJ6 251 aa12.6□□□□□ -0.39
SMARCB1-206ENST00000477836 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.6□□□□□ -0.39
SMARCB1-206ENST00000477836 PRMT6Q96LA8 375 aaPredicted RBP12.6□□□□□ -0.39
SMARCB1-206ENST00000477836 CDC5LQ99459 802 aaKnown RBP12.6□□□□□ -0.39
SMARCB1-206ENST00000477836 GDF15Q99988 308 aa12.6□□□□□ -0.39
SMARCB1-206ENST00000477836 BABAM1Q9NWV8 329 aa12.6□□□□□ -0.39
SMARCB1-206ENST00000477836 MUC3AQ02505 3323 aa12.6□□□□□ -0.39
SMARCB1-206ENST00000477836 AOX1Q06278 1338 aa12.6□□□□□ -0.39
SMARCB1-206ENST00000477836 MAPK8IP3Q9UPT6 1336 aa12.6□□□□□ -0.39
SMARCB1-206ENST00000477836 SPDYE2BA6NHP3 402 aa12.59□□□□□ -0.39
SMARCB1-206ENST00000477836 FMNL1O95466 1100 aaPredicted RBP12.59□□□□□ -0.39
SMARCB1-206ENST00000477836 SGPL1O95470 568 aa12.59□□□□□ -0.39
SMARCB1-206ENST00000477836 SPDYE6P0CI01 402 aa12.59□□□□□ -0.39
SMARCB1-206ENST00000477836 KLRK1P26718 216 aa12.59□□□□□ -0.39
SMARCB1-206ENST00000477836 BCAMP50895 628 aa12.59□□□□□ -0.39
SMARCB1-206ENST00000477836 DDX10Q13206 875 aaKnown RBP12.59□□□□□ -0.39
SMARCB1-206ENST00000477836 VGLL4Q14135 290 aa12.59□□□□□ -0.39
SMARCB1-206ENST00000477836 LRIT3Q3SXY7 679 aa12.59□□□□□ -0.39
SMARCB1-206ENST00000477836 RIC3Q7Z5B4 369 aa12.59□□□□□ -0.39
SMARCB1-206ENST00000477836 CERS5Q8N5B7 392 aa12.59□□□□□ -0.39
SMARCB1-206ENST00000477836 BSDC1Q9NW68 430 aaPredicted RBP12.59□□□□□ -0.39
SMARCB1-206ENST00000477836 DBF4Q9UBU7 674 aaPredicted RBP12.59□□□□□ -0.39
SMARCB1-206ENST00000477836 MYPNQ86TC9 1320 aa12.59□□□□□ -0.39
SMARCB1-206ENST00000477836 BTBD19C9JJ37 291 aa12.58□□□□□ -0.4
SMARCB1-206ENST00000477836 TFRCP02786 760 aaKnown RBP12.58□□□□□ -0.4
SMARCB1-206ENST00000477836 PCCAP05165 728 aaPredicted RBP12.58□□□□□ -0.4
SMARCB1-206ENST00000477836 MYD88Q99836 296 aa12.58□□□□□ -0.4
SMARCB1-206ENST00000477836 UNC93B1Q9H1C4 597 aa12.58□□□□□ -0.4
SMARCB1-206ENST00000477836 CPA4Q9UI42 421 aa12.58□□□□□ -0.4
SMARCB1-206ENST00000477836 LEMD3Q9Y2U8 911 aa12.58□□□□□ -0.4
SMARCB1-206ENST00000477836 CSADQ9Y600 493 aa12.58□□□□□ -0.4
SMARCB1-206ENST00000477836 CETPP11597 493 aa12.57□□□□□ -0.4
SMARCB1-206ENST00000477836 RBM5P52756 815 aaKnown RBP eCLIP12.57□□□□□ -0.4
SMARCB1-206ENST00000477836 MAP3K9P80192 1104 aa12.57□□□□□ -0.4
SMARCB1-206ENST00000477836 C17orf99Q6UX52 265 aa12.57□□□□□ -0.4
SMARCB1-206ENST00000477836 HELBQ8NG08 1087 aaPredicted RBP12.57□□□□□ -0.4
SMARCB1-206ENST00000477836 ZCCHC17Q9NP64 241 aaKnown RBP12.57□□□□□ -0.4
SMARCB1-206ENST00000477836 ZMYND8Q9ULU4 1186 aaPredicted RBP12.57□□□□□ -0.4
SMARCB1-206ENST00000477836 RIPK4P57078 832 aa12.56□□□□□ -0.4
SMARCB1-206ENST00000477836 CDAN1Q8IWY9 1227 aa12.56□□□□□ -0.4
SMARCB1-206ENST00000477836 C7orf61Q8IZ16 206 aa12.56□□□□□ -0.4
SMARCB1-206ENST00000477836 TDHQ8IZJ6 230 aa12.56□□□□□ -0.4
SMARCB1-206ENST00000477836 CCDC191Q8NCU4 936 aa12.56□□□□□ -0.4
SMARCB1-206ENST00000477836 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.56□□□□□ -0.4
SMARCB1-206ENST00000477836 CD209Q9NNX6 404 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms