RNA–Protein interactions for RNA: ENST00000477741.5

NELFCD-205, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 1 (best)

Gene NELFCD, Length 2,070 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-205ENST00000477741 USP26Q9BXU7 913 aa17.29■□□□□ 0.36
NELFCD-205ENST00000477741 C22orf23Q9BZE7 217 aa17.29■□□□□ 0.36
NELFCD-205ENST00000477741 TMX4Q9H1E5 349 aaPredicted RBP17.29■□□□□ 0.36
NELFCD-205ENST00000477741 PIM2Q9P1W9 311 aa17.29■□□□□ 0.36
NELFCD-205ENST00000477741 MED23Q9ULK4 1368 aa17.29■□□□□ 0.36
NELFCD-205ENST00000477741 RNF113AO15541 343 aaKnown RBP17.28■□□□□ 0.36
NELFCD-205ENST00000477741 SLC9C2Q5TAH2 1124 aa17.28■□□□□ 0.36
NELFCD-205ENST00000477741 ZNF804AQ7Z570 1209 aa17.28■□□□□ 0.36
NELFCD-205ENST00000477741 OSBP2Q969R2 916 aa17.28■□□□□ 0.36
NELFCD-205ENST00000477741 TBC1D32Q96NH3 1257 aa17.28■□□□□ 0.36
NELFCD-205ENST00000477741 DENND2AQ9ULE3 1009 aa17.28■□□□□ 0.36
NELFCD-205ENST00000477741 M0R2C6 588 aa17.28■□□□□ 0.36
NELFCD-205ENST00000477741 PTH1RQ03431 593 aa17.28■□□□□ 0.36
NELFCD-205ENST00000477741 GRIK5Q16478 980 aa17.28■□□□□ 0.36
NELFCD-205ENST00000477741 PUS7LQ9H0K6 701 aaKnown RBP17.28■□□□□ 0.36
NELFCD-205ENST00000477741 CD2APQ9Y5K6 639 aa17.28■□□□□ 0.36
NELFCD-205ENST00000477741 ZC3H12CQ9C0D7 883 aaKnown RBP17.27■□□□□ 0.36
NELFCD-205ENST00000477741 DBNDD1Q9H9R9 158 aa17.27■□□□□ 0.36
NELFCD-205ENST00000477741 KCNQ5Q9NR82 932 aa17.27■□□□□ 0.36
NELFCD-205ENST00000477741 MYO5AQ9Y4I1 1855 aaKnown RBP17.27■□□□□ 0.36
NELFCD-205ENST00000477741 DLEC1Q9Y238 1755 aa17.27■□□□□ 0.35
NELFCD-205ENST00000477741 PDE6AP16499 860 aa17.27■□□□□ 0.35
NELFCD-205ENST00000477741 PRDX5P30044 214 aa17.27■□□□□ 0.35
NELFCD-205ENST00000477741 TTF1Q15361 905 aaPredicted RBP17.27■□□□□ 0.35
NELFCD-205ENST00000477741 ZMYM1Q5SVZ6 1142 aa17.27■□□□□ 0.35
NELFCD-205ENST00000477741 ZNF384Q8TF68 577 aa17.27■□□□□ 0.35
NELFCD-205ENST00000477741 LSG1Q9H089 658 aaKnown RBP17.27■□□□□ 0.35
NELFCD-205ENST00000477741 UPF2Q9HAU5 1272 aaKnown RBP17.27■□□□□ 0.35
NELFCD-205ENST00000477741 LRP2BPQ9P2M1 347 aa17.27■□□□□ 0.35
NELFCD-205ENST00000477741 HIP1O00291 1037 aa17.26■□□□□ 0.35
NELFCD-205ENST00000477741 ADD2P35612 726 aa17.26■□□□□ 0.35
NELFCD-205ENST00000477741 AOC3Q16853 763 aa17.26■□□□□ 0.35
NELFCD-205ENST00000477741 MAGEB6Q8N7X4 407 aa17.26■□□□□ 0.35
NELFCD-205ENST00000477741 BCS1LQ9Y276 419 aa17.26■□□□□ 0.35
NELFCD-205ENST00000477741 MAST3O60307 1309 aa17.26■□□□□ 0.35
NELFCD-205ENST00000477741 ZNF532Q9HCE3 1301 aa17.26■□□□□ 0.35
NELFCD-205ENST00000477741 TCRBV5S4A2TA0A5A2 114 aa17.25■□□□□ 0.35
NELFCD-205ENST00000477741 IL1R1P14778 569 aa17.25■□□□□ 0.35
NELFCD-205ENST00000477741 DALRD3Q5D0E6 543 aaKnown RBP17.25■□□□□ 0.35
NELFCD-205ENST00000477741 VPS53Q5VIR6 699 aa17.25■□□□□ 0.35
NELFCD-205ENST00000477741 ADGRA1Q86SQ6 560 aa17.25■□□□□ 0.35
NELFCD-205ENST00000477741 RTFDC1Q9BY42 306 aaPredicted RBP17.25■□□□□ 0.35
NELFCD-205ENST00000477741 FHDC1Q9C0D6 1143 aaPredicted RBP17.25■□□□□ 0.35
NELFCD-205ENST00000477741 RFX7Q2KHR2 1363 aa17.25■□□□□ 0.35
NELFCD-205ENST00000477741 REC8O95072 547 aa17.25■□□□□ 0.35
NELFCD-205ENST00000477741 RUFY2Q8WXA3 655 aa17.25■□□□□ 0.35
NELFCD-205ENST00000477741 MXD3Q9BW11 206 aa17.25■□□□□ 0.35
NELFCD-205ENST00000477741 SEMA3EO15041 775 aa17.24■□□□□ 0.35
NELFCD-205ENST00000477741 MCMDC2Q4G0Z9 681 aa17.24■□□□□ 0.35
NELFCD-205ENST00000477741 CCDC93Q567U6 631 aa17.24■□□□□ 0.35
NELFCD-205ENST00000477741 ZNF277Q9NRM2 450 aaPredicted RBP17.24■□□□□ 0.35
NELFCD-205ENST00000477741 RAI14Q9P0K7 980 aa17.24■□□□□ 0.35
NELFCD-205ENST00000477741 PALD1Q9ULE6 856 aa17.24■□□□□ 0.35
NELFCD-205ENST00000477741 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.24■□□□□ 0.354e-7■■□□□ 13.6
NELFCD-205ENST00000477741 GTF2IP78347 998 aa17.23■□□□□ 0.35
NELFCD-205ENST00000477741 MAP3K12Q12852 859 aa17.23■□□□□ 0.35
NELFCD-205ENST00000477741 APPBP2Q92624 585 aa17.23■□□□□ 0.35
NELFCD-205ENST00000477741 FBXW7Q969H0 707 aa17.23■□□□□ 0.35
NELFCD-205ENST00000477741 KIF2CQ99661 725 aa17.23■□□□□ 0.35
NELFCD-205ENST00000477741 MIGA1Q8NAN2 632 aa17.22■□□□□ 0.35
NELFCD-205ENST00000477741 EYA3Q99504 573 aa17.22■□□□□ 0.35
NELFCD-205ENST00000477741 COA1Q9GZY4 146 aa17.22■□□□□ 0.35
NELFCD-205ENST00000477741 HELLSQ9NRZ9 838 aa17.22■□□□□ 0.35
NELFCD-205ENST00000477741 CCDC171Q6TFL3 1326 aa17.22■□□□□ 0.35
NELFCD-205ENST00000477741 RAD50Q92878 1312 aa17.22■□□□□ 0.35
NELFCD-205ENST00000477741 FOXP2O15409 715 aa17.22■□□□□ 0.35
NELFCD-205ENST00000477741 RBM25P49756 843 aaKnown RBP17.22■□□□□ 0.35
NELFCD-205ENST00000477741 CC2D2BQ6DHV5 1058 aa17.22■□□□□ 0.35
NELFCD-205ENST00000477741 CHD4Q14839 1912 aa17.21■□□□□ 0.35
NELFCD-205ENST00000477741 PPIP5K2O43314 1243 aa17.21■□□□□ 0.35
NELFCD-205ENST00000477741 ZFYP08048 801 aaPredicted RBP17.21■□□□□ 0.35
NELFCD-205ENST00000477741 MECOMQ03112 1051 aa17.21■□□□□ 0.35
NELFCD-205ENST00000477741 KIAA2012Q0VF49 1180 aa17.21■□□□□ 0.35
NELFCD-205ENST00000477741 UBE3CQ15386 1083 aa17.21■□□□□ 0.35
NELFCD-205ENST00000477741 KIAA1211Q6ZU35 1233 aa17.21■□□□□ 0.35
NELFCD-205ENST00000477741 NSUN4Q96CB9 384 aaKnown RBP17.21■□□□□ 0.35
NELFCD-205ENST00000477741 PDS5AQ29RF7 1337 aaKnown RBP17.21■□□□□ 0.34
NELFCD-205ENST00000477741 GPAA1O43292 621 aa17.2■□□□□ 0.34
NELFCD-205ENST00000477741 ECE2O60344 883 aa17.2■□□□□ 0.34
NELFCD-205ENST00000477741 MFSD14BQ5SR56 506 aa17.2■□□□□ 0.34
NELFCD-205ENST00000477741 ERICH6Q7L0X2 663 aa17.2■□□□□ 0.34
NELFCD-205ENST00000477741 RTKN2Q8IZC4 609 aa17.2■□□□□ 0.34
NELFCD-205ENST00000477741 CERS5Q8N5B7 392 aa17.2■□□□□ 0.34
NELFCD-205ENST00000477741 TAF6LQ9Y6J9 622 aa17.2■□□□□ 0.34
NELFCD-205ENST00000477741 COL4A5P29400 1685 aa17.2■□□□□ 0.34
NELFCD-205ENST00000477741 G3V3G9 751 aa17.2■□□□□ 0.34
NELFCD-205ENST00000477741 NFKBIEO00221 500 aa17.2■□□□□ 0.34
NELFCD-205ENST00000477741 CYP7A1P22680 504 aa17.2■□□□□ 0.34
NELFCD-205ENST00000477741 DIXDC1Q155Q3 683 aa17.2■□□□□ 0.34
NELFCD-205ENST00000477741 DCAF8Q5TAQ9 597 aa17.2■□□□□ 0.34
NELFCD-205ENST00000477741 BRCA1P38398 1863 aaKnown RBP17.19■□□□□ 0.34
NELFCD-205ENST00000477741 YDJCA8MPS7 323 aa17.19■□□□□ 0.34
NELFCD-205ENST00000477741 ZSCAN25Q6NSZ9 544 aa17.19■□□□□ 0.34
NELFCD-205ENST00000477741 RASEFQ8IZ41 740 aa17.19■□□□□ 0.34
NELFCD-205ENST00000477741 WDR66Q8TBY9 1149 aa17.19■□□□□ 0.34
NELFCD-205ENST00000477741 PSMD1Q99460 953 aa17.19■□□□□ 0.34
NELFCD-205ENST00000477741 SYT17Q9BSW7 474 aa17.19■□□□□ 0.34
NELFCD-205ENST00000477741 ARMT1Q9H993 441 aa17.19■□□□□ 0.34
NELFCD-205ENST00000477741 DOCK2Q92608 1830 aa17.19■□□□□ 0.34
NELFCD-205ENST00000477741 HSPD1P10809 573 aaKnown RBP17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 93.9 ms