RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 DNAJC2Q99543 621 aaKnown RBP14.62□□□□□ -0.07
PRPF39-203ENST00000477626 WWC3Q9ULE0 1092 aa14.62□□□□□ -0.07
PRPF39-203ENST00000477626 CIZ1Q9ULV3 898 aaPredicted RBP14.62□□□□□ -0.07
PRPF39-203ENST00000477626 PHF14O94880 888 aa14.61□□□□□ -0.07
PRPF39-203ENST00000477626 UQCRFS1P1P0C7P4 283 aa14.61□□□□□ -0.07
PRPF39-203ENST00000477626 INTS4Q96HW7 963 aaKnown RBP14.61□□□□□ -0.07
PRPF39-203ENST00000477626 ZFYP08048 801 aaPredicted RBP14.61□□□□□ -0.07
PRPF39-203ENST00000477626 RPS8P62241 208 aaKnown RBP14.61□□□□□ -0.07
PRPF39-203ENST00000477626 APPBP2Q92624 585 aa14.61□□□□□ -0.07
PRPF39-203ENST00000477626 CCDC158Q5M9N0 1113 aa14.61□□□□□ -0.07
PRPF39-203ENST00000477626 ANKRD18AQ8IVF6 992 aa14.61□□□□□ -0.07
PRPF39-203ENST00000477626 NID2Q14112 1375 aa14.6□□□□□ -0.07
PRPF39-203ENST00000477626 SERPINB2P05120 415 aa14.6□□□□□ -0.07
PRPF39-203ENST00000477626 TTC39AQ5SRH9 613 aa14.6□□□□□ -0.07
PRPF39-203ENST00000477626 PRPF40BQ6NWY9 871 aaKnown RBP14.6□□□□□ -0.07
PRPF39-203ENST00000477626 CRAMP1Q96RY5 1269 aa14.6□□□□□ -0.07
PRPF39-203ENST00000477626 ARFGEF1Q9Y6D6 1849 aa14.6□□□□□ -0.07
PRPF39-203ENST00000477626 FAM177BA6PVY3 158 aa14.59□□□□□ -0.07
PRPF39-203ENST00000477626 SLC5A1P13866 664 aa14.59□□□□□ -0.07
PRPF39-203ENST00000477626 ALX1Q15699 326 aa14.59□□□□□ -0.07
PRPF39-203ENST00000477626 EPB41L4AQ9HCS5 686 aaPredicted RBP14.59□□□□□ -0.07
PRPF39-203ENST00000477626 PDE6AP16499 860 aa14.59□□□□□ -0.07
PRPF39-203ENST00000477626 IGHMBP2P38935 993 aaKnown RBP14.59□□□□□ -0.07
PRPF39-203ENST00000477626 AK2P54819 239 aa14.59□□□□□ -0.07
PRPF39-203ENST00000477626 ZGPATQ8N5A5 531 aaKnown RBP14.59□□□□□ -0.07
PRPF39-203ENST00000477626 HSCBQ8IWL3 235 aa14.59□□□□□ -0.07
PRPF39-203ENST00000477626 NLRP3Q96P20 1036 aa14.59□□□□□ -0.07
PRPF39-203ENST00000477626 RIOK1Q9BRS2 568 aaKnown RBP14.59□□□□□ -0.07
PRPF39-203ENST00000477626 BICDL1Q6ZP65 573 aa14.58□□□□□ -0.07
PRPF39-203ENST00000477626 SEMA3EO15041 775 aa14.58□□□□□ -0.08
PRPF39-203ENST00000477626 CPA1P15085 419 aa14.58□□□□□ -0.08
PRPF39-203ENST00000477626 RPS6KB1P23443 525 aa14.58□□□□□ -0.08
PRPF39-203ENST00000477626 MCM2P49736 904 aa14.58□□□□□ -0.08
PRPF39-203ENST00000477626 PKP1Q13835 747 aa14.58□□□□□ -0.08
PRPF39-203ENST00000477626 CNBD1Q8NA66 436 aa14.58□□□□□ -0.08
PRPF39-203ENST00000477626 STRBPQ96SI9 672 aaKnown RBP14.58□□□□□ -0.08
PRPF39-203ENST00000477626 MYH1P12882 1939 aa14.58□□□□□ -0.08
PRPF39-203ENST00000477626 APBA3O96018 575 aa14.58□□□□□ -0.08
PRPF39-203ENST00000477626 TTF1Q15361 905 aaPredicted RBP14.58□□□□□ -0.08
PRPF39-203ENST00000477626 NFKBIBQ15653 356 aa14.58□□□□□ -0.08
PRPF39-203ENST00000477626 CCDC24Q8N4L8 307 aa14.58□□□□□ -0.08
PRPF39-203ENST00000477626 SRGNP10124 158 aa14.57□□□□□ -0.08
PRPF39-203ENST00000477626 U3KPZ7 1027 aaPredicted RBP14.57□□□□□ -0.08
PRPF39-203ENST00000477626 IL1R1P14778 569 aa14.57□□□□□ -0.08
PRPF39-203ENST00000477626 C7orf43Q8WVR3 580 aa14.57□□□□□ -0.08
PRPF39-203ENST00000477626 ARXQ96QS3 562 aa14.57□□□□□ -0.08
PRPF39-203ENST00000477626 MKRN1Q9UHC7 482 aaKnown RBP14.57□□□□□ -0.08
PRPF39-203ENST00000477626 WDR19Q8NEZ3 1342 aa14.57□□□□□ -0.08
PRPF39-203ENST00000477626 IGSF3O75054 1194 aa14.57□□□□□ -0.08
PRPF39-203ENST00000477626 FGRP09769 529 aa14.57□□□□□ -0.08
PRPF39-203ENST00000477626 HMGB2P26583 209 aaKnown RBP14.57□□□□□ -0.08
PRPF39-203ENST00000477626 NEK4P51957 841 aa14.57□□□□□ -0.08
PRPF39-203ENST00000477626 MPHOSPH8Q99549 860 aa14.57□□□□□ -0.08
PRPF39-203ENST00000477626 TPCN1Q9ULQ1 816 aa14.57□□□□□ -0.08
PRPF39-203ENST00000477626 TDRD7Q8NHU6 1098 aaKnown RBP14.56□□□□□ -0.08
PRPF39-203ENST00000477626 UPF3BQ9BZI7 483 aaKnown RBP14.56□□□□□ -0.08
PRPF39-203ENST00000477626 UTRNP46939 3433 aa14.56□□□□□ -0.08
PRPF39-203ENST00000477626 ZNF532Q9HCE3 1301 aa14.56□□□□□ -0.08
PRPF39-203ENST00000477626 GYG1P46976 350 aa14.56□□□□□ -0.08
PRPF39-203ENST00000477626 TAF7LQ5H9L4 462 aa14.56□□□□□ -0.08
PRPF39-203ENST00000477626 GPSM2P81274 684 aa14.55□□□□□ -0.08
PRPF39-203ENST00000477626 EZH2Q15910 746 aaKnown RBP14.55□□□□□ -0.08
PRPF39-203ENST00000477626 MB21D2Q8IYB1 491 aaPredicted RBP14.55□□□□□ -0.08
PRPF39-203ENST00000477626 BRIP1Q9BX63 1249 aa14.55□□□□□ -0.08
PRPF39-203ENST00000477626 BCL11AQ9H165 835 aa14.55□□□□□ -0.08
PRPF39-203ENST00000477626 ANTXR2P58335 489 aa14.55□□□□□ -0.08
PRPF39-203ENST00000477626 ANKRD2Q9GZV1 360 aa14.55□□□□□ -0.08
PRPF39-203ENST00000477626 CHMP5Q9NZZ3 219 aa14.55□□□□□ -0.08
PRPF39-203ENST00000477626 GPAA1O43292 621 aa14.54□□□□□ -0.08
PRPF39-203ENST00000477626 ST18O60284 1047 aa14.54□□□□□ -0.08
PRPF39-203ENST00000477626 FGAP02671 866 aa14.54□□□□□ -0.08
PRPF39-203ENST00000477626 MCCP23508 829 aa14.54□□□□□ -0.08
PRPF39-203ENST00000477626 ME3Q16798 604 aa14.54□□□□□ -0.08
PRPF39-203ENST00000477626 TMED8Q6PL24 325 aaPredicted RBP14.54□□□□□ -0.08
PRPF39-203ENST00000477626 FLAD1Q8NFF5 587 aa14.54□□□□□ -0.08
PRPF39-203ENST00000477626 GSG1L2A8MUP6 293 aa14.54□□□□□ -0.08
PRPF39-203ENST00000477626 FKBP4Q02790 459 aaKnown RBP eCLIP14.54□□□□□ -0.08
PRPF39-203ENST00000477626 SLC15A2Q16348 729 aa14.54□□□□□ -0.08
PRPF39-203ENST00000477626 CASTP20810 708 aaKnown RBP14.54□□□□□ -0.08
PRPF39-203ENST00000477626 NSUN4Q96CB9 384 aaKnown RBP14.54□□□□□ -0.08
PRPF39-203ENST00000477626 POLLQ9UGP5 575 aa14.54□□□□□ -0.08
PRPF39-203ENST00000477626 LEMD3Q9Y2U8 911 aa14.54□□□□□ -0.08
PRPF39-203ENST00000477626 TTLL5Q6EMB2 1281 aa14.53□□□□□ -0.08
PRPF39-203ENST00000477626 E7EWF7 191 aa14.53□□□□□ -0.08
PRPF39-203ENST00000477626 BRD1O95696 1058 aa14.53□□□□□ -0.08
PRPF39-203ENST00000477626 ANAPC4Q9UJX5 808 aa14.53□□□□□ -0.08
PRPF39-203ENST00000477626 XDHP47989 1333 aa14.53□□□□□ -0.08
PRPF39-203ENST00000477626 ROBO3Q96MS0 1386 aa14.53□□□□□ -0.08
PRPF39-203ENST00000477626 TBC1D10CQ8IV04 446 aa14.53□□□□□ -0.08
PRPF39-203ENST00000477626 TNPO1Q92973 898 aaKnown RBP14.53□□□□□ -0.08
PRPF39-203ENST00000477626 RTFDC1Q9BY42 306 aaPredicted RBP14.53□□□□□ -0.08
PRPF39-203ENST00000477626 CWC22Q9HCG8 908 aaKnown RBP14.53□□□□□ -0.08
PRPF39-203ENST00000477626 NLGN1Q8N2Q7 840 aa14.52□□□□□ -0.08
PRPF39-203ENST00000477626 PDGFDQ9GZP0 370 aaPredicted RBP14.52□□□□□ -0.08
PRPF39-203ENST00000477626 DENND2AQ9ULE3 1009 aa14.52□□□□□ -0.08
PRPF39-203ENST00000477626 MYH8P13535 1937 aa14.52□□□□□ -0.08
PRPF39-203ENST00000477626 FRAT2O75474 233 aaPredicted RBP14.52□□□□□ -0.09
PRPF39-203ENST00000477626 GRIK5Q16478 980 aa14.52□□□□□ -0.09
PRPF39-203ENST00000477626 JAKMIP1Q96N16 626 aaKnown RBP14.52□□□□□ -0.09
PRPF39-203ENST00000477626 SLC9C2Q5TAH2 1124 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms