RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 SNRPA1P09661 255 aaKnown RBP14.64□□□□□ -0.07
RTFDC1-207ENST00000477573 SLC39A6Q13433 755 aa14.64□□□□□ -0.07
RTFDC1-207ENST00000477573 KSR2Q6VAB6 950 aa14.64□□□□□ -0.07
RTFDC1-207ENST00000477573 ZNF526Q8TF50 670 aaPredicted RBP14.64□□□□□ -0.07
RTFDC1-207ENST00000477573 CPSF2Q9P2I0 782 aaKnown RBP14.64□□□□□ -0.07
RTFDC1-207ENST00000477573 ERVV-2B6SEH9 535 aa14.63□□□□□ -0.07
RTFDC1-207ENST00000477573 KINO60870 393 aaKnown RBP14.63□□□□□ -0.07
RTFDC1-207ENST00000477573 BEND3Q5T5X7 828 aa14.63□□□□□ -0.07
RTFDC1-207ENST00000477573 MCM8Q9UJA3 840 aa14.63□□□□□ -0.07
RTFDC1-207ENST00000477573 ROBO1Q9Y6N7 1651 aa14.63□□□□□ -0.07
RTFDC1-207ENST00000477573 ALDH1L1O75891 902 aa14.63□□□□□ -0.07
RTFDC1-207ENST00000477573 ANXA1P04083 346 aa14.63□□□□□ -0.07
RTFDC1-207ENST00000477573 MRPL12P52815 198 aaKnown RBP14.63□□□□□ -0.07
RTFDC1-207ENST00000477573 CCT2P78371 535 aaKnown RBP14.63□□□□□ -0.07
RTFDC1-207ENST00000477573 CCDC93Q567U6 631 aa14.63□□□□□ -0.07
RTFDC1-207ENST00000477573 TBC1D9Q6ZT07 1266 aa14.63□□□□□ -0.07
RTFDC1-207ENST00000477573 MICALL1Q8N3F8 863 aa14.63□□□□□ -0.07
RTFDC1-207ENST00000477573 ARMC2Q8NEN0 867 aa14.63□□□□□ -0.07
RTFDC1-207ENST00000477573 ZNF483Q8TF39 744 aaPredicted RBP14.63□□□□□ -0.07
RTFDC1-207ENST00000477573 SRRTQ9BXP5 876 aaKnown RBP14.63□□□□□ -0.07
RTFDC1-207ENST00000477573 TMX4Q9H1E5 349 aaPredicted RBP14.63□□□□□ -0.07
RTFDC1-207ENST00000477573 ORC3Q9UBD5 711 aaPredicted RBP14.63□□□□□ -0.07
RTFDC1-207ENST00000477573 AHDC1Q5TGY3 1603 aaPredicted RBP14.62□□□□□ -0.07
RTFDC1-207ENST00000477573 TBC1D8O95759 1140 aa14.62□□□□□ -0.07
RTFDC1-207ENST00000477573 SETSIPP0DME0 302 aa14.62□□□□□ -0.07
RTFDC1-207ENST00000477573 LRMPQ12912 555 aa14.62□□□□□ -0.07
RTFDC1-207ENST00000477573 RBBP5Q15291 538 aaKnown RBP14.62□□□□□ -0.07
RTFDC1-207ENST00000477573 LARP1Q6PKG0 1096 aaKnown RBP14.62□□□□□ -0.07
RTFDC1-207ENST00000477573 ZGPATQ8N5A5 531 aaKnown RBP14.62□□□□□ -0.07
RTFDC1-207ENST00000477573 MSL3Q8N5Y2 521 aaKnown RBP14.62□□□□□ -0.07
RTFDC1-207ENST00000477573 ZCCHC17Q9NP64 241 aaKnown RBP14.62□□□□□ -0.07
RTFDC1-207ENST00000477573 ADCY9O60503 1353 aa14.62□□□□□ -0.07
RTFDC1-207ENST00000477573 CCP110O43303 1012 aa14.61□□□□□ -0.07
RTFDC1-207ENST00000477573 MYBL2P10244 700 aa14.61□□□□□ -0.07
RTFDC1-207ENST00000477573 NKX1-1Q15270 411 aaPredicted RBP14.61□□□□□ -0.07
RTFDC1-207ENST00000477573 CCDC158Q5M9N0 1113 aa14.61□□□□□ -0.07
RTFDC1-207ENST00000477573 PLEKHM2Q8IWE5 1019 aa14.61□□□□□ -0.07
RTFDC1-207ENST00000477573 CTCFLQ8NI51 663 aaPredicted RBP14.61□□□□□ -0.07
RTFDC1-207ENST00000477573 ZNF496Q96IT1 587 aaPredicted RBP14.61□□□□□ -0.07
RTFDC1-207ENST00000477573 USP26Q9BXU7 913 aa14.61□□□□□ -0.07
RTFDC1-207ENST00000477573 MAP3K2Q9Y2U5 619 aa14.61□□□□□ -0.07
RTFDC1-207ENST00000477573 GPTP24298 496 aa14.61□□□□□ -0.07
RTFDC1-207ENST00000477573 MAGEA8P43361 318 aa14.61□□□□□ -0.07
RTFDC1-207ENST00000477573 TCHHQ07283 1943 aa14.6□□□□□ -0.07
RTFDC1-207ENST00000477573 PRAMEF22A3QJZ6 481 aa14.6□□□□□ -0.07
RTFDC1-207ENST00000477573 PPFIA4O75335 1185 aa14.6□□□□□ -0.07
RTFDC1-207ENST00000477573 CDC25BP30305 580 aa14.6□□□□□ -0.07
RTFDC1-207ENST00000477573 NF2P35240 595 aa14.6□□□□□ -0.07
RTFDC1-207ENST00000477573 PROSER3Q2NL68 480 aa14.6□□□□□ -0.07
RTFDC1-207ENST00000477573 FAM200AQ8TCP9 573 aa14.6□□□□□ -0.07
RTFDC1-207ENST00000477573 UBXN4Q92575 508 aa14.6□□□□□ -0.07
RTFDC1-207ENST00000477573 APBB1O00213 710 aa14.6□□□□□ -0.07
RTFDC1-207ENST00000477573 PPFIA2O75334 1257 aa14.6□□□□□ -0.07
RTFDC1-207ENST00000477573 SLC5A9Q2M3M2 681 aa14.6□□□□□ -0.07
RTFDC1-207ENST00000477573 RINLQ6ZS11 566 aa14.6□□□□□ -0.07
RTFDC1-207ENST00000477573 LRRCC1Q9C099 1032 aa14.6□□□□□ -0.07
RTFDC1-207ENST00000477573 SLC24A3Q9HC58 644 aa14.6□□□□□ -0.07
RTFDC1-207ENST00000477573 BTG4Q9NY30 223 aa14.6□□□□□ -0.07
RTFDC1-207ENST00000477573 COL14A1Q05707 1796 aaKnown RBP14.59□□□□□ -0.07
RTFDC1-207ENST00000477573 CDC45O75419 566 aa14.59□□□□□ -0.07
RTFDC1-207ENST00000477573 CCDC192P0DO97 292 aa14.59□□□□□ -0.07
RTFDC1-207ENST00000477573 KCNV1Q6PIU1 500 aa14.59□□□□□ -0.07
RTFDC1-207ENST00000477573 LINS1Q8NG48 757 aa14.59□□□□□ -0.07
RTFDC1-207ENST00000477573 TSPAN18Q96SJ8 248 aa14.59□□□□□ -0.07
RTFDC1-207ENST00000477573 C9orf78Q9NZ63 289 aaPredicted RBP14.59□□□□□ -0.07
RTFDC1-207ENST00000477573 C5P01031 1676 aa14.59□□□□□ -0.07
RTFDC1-207ENST00000477573 PNMA6EA0A0J9YXQ4 647 aa14.58□□□□□ -0.07
RTFDC1-207ENST00000477573 RPS6KA3P51812 740 aa14.58□□□□□ -0.07
RTFDC1-207ENST00000477573 NEXNQ0ZGT2 675 aa14.58□□□□□ -0.07
RTFDC1-207ENST00000477573 PDIA6Q15084 440 aa14.58□□□□□ -0.07
RTFDC1-207ENST00000477573 TTC22Q5TAA0 569 aa14.58□□□□□ -0.07
RTFDC1-207ENST00000477573 PLA2G4DQ86XP0 818 aa14.58□□□□□ -0.07
RTFDC1-207ENST00000477573 POTEDQ86YR6 584 aa14.58□□□□□ -0.07
RTFDC1-207ENST00000477573 SSH3Q8TE77 659 aa14.58□□□□□ -0.07
RTFDC1-207ENST00000477573 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP14.58□□□□□ -0.073e-9■■■■□ 21.1
RTFDC1-207ENST00000477573 LTBP4Q8N2S1 1624 aa14.58□□□□□ -0.08
RTFDC1-207ENST00000477573 COL22A1Q8NFW1 1626 aaPredicted RBP14.58□□□□□ -0.08
RTFDC1-207ENST00000477573 RAB11FIP3O75154 756 aa14.58□□□□□ -0.08
RTFDC1-207ENST00000477573 RTN2O75298 545 aa14.58□□□□□ -0.08
RTFDC1-207ENST00000477573 CHMLP26374 656 aa14.58□□□□□ -0.08
RTFDC1-207ENST00000477573 MCM2P49736 904 aa14.58□□□□□ -0.08
RTFDC1-207ENST00000477573 UBE2HP62256 183 aa14.58□□□□□ -0.08
RTFDC1-207ENST00000477573 SCRN1Q12765 414 aa14.58□□□□□ -0.08
RTFDC1-207ENST00000477573 CC2D1AQ6P1N0 951 aaPredicted RBP14.58□□□□□ -0.08
RTFDC1-207ENST00000477573 RIC3Q7Z5B4 369 aa14.58□□□□□ -0.08
RTFDC1-207ENST00000477573 USP48Q86UV5 1035 aa14.58□□□□□ -0.08
RTFDC1-207ENST00000477573 DRC7Q8IY82 874 aa14.58□□□□□ -0.08
RTFDC1-207ENST00000477573 DDX54Q8TDD1 881 aaKnown RBP14.58□□□□□ -0.08
RTFDC1-207ENST00000477573 N4BP2L2Q92802 583 aaPredicted RBP14.58□□□□□ -0.08
RTFDC1-207ENST00000477573 BAG1Q99933 345 aaPredicted RBP14.58□□□□□ -0.08
RTFDC1-207ENST00000477573 SMC3Q9UQE7 1217 aa14.58□□□□□ -0.08
RTFDC1-207ENST00000477573 A0A1B0GUA9 196 aa14.57□□□□□ -0.08
RTFDC1-207ENST00000477573 SMARCA5O60264 1052 aaPredicted RBP14.57□□□□□ -0.08
RTFDC1-207ENST00000477573 GADD45BO75293 160 aaPredicted RBP14.57□□□□□ -0.08
RTFDC1-207ENST00000477573 SASH3O75995 380 aa14.57□□□□□ -0.08
RTFDC1-207ENST00000477573 RDXP35241 583 aaKnown RBP14.57□□□□□ -0.08
RTFDC1-207ENST00000477573 PRPHP41219 470 aa14.57□□□□□ -0.08
RTFDC1-207ENST00000477573 AIMP1Q12904 312 aaKnown RBP14.57□□□□□ -0.08
RTFDC1-207ENST00000477573 HSP90AB4PQ58FF6 505 aa14.57□□□□□ -0.08
RTFDC1-207ENST00000477573 LRRC31Q6UY01 552 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 127.8 ms