RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 CELF2O95319 508 aaKnown RBP22.02■■□□□ 1.12
PTPN7-209ENST00000477554 KRT26Q7Z3Y9 468 aa22.02■■□□□ 1.12
PTPN7-209ENST00000477554 ITPRIPQ8IWB1 547 aa22.02■■□□□ 1.12
PTPN7-209ENST00000477554 CNTNAP1P78357 1384 aa22.02■■□□□ 1.12
PTPN7-209ENST00000477554 COL1A1P02452 1464 aaPredicted RBP22.01■■□□□ 1.11
PTPN7-209ENST00000477554 PRAMEF18Q5VWM3 479 aa22.01■■□□□ 1.11
PTPN7-209ENST00000477554 CDC37L1Q7L3B6 337 aa22.01■■□□□ 1.11
PTPN7-209ENST00000477554 JMYQ8N9B5 988 aa22.01■■□□□ 1.11
PTPN7-209ENST00000477554 COPRSQ9NQ92 184 aa22.01■■□□□ 1.11
PTPN7-209ENST00000477554 WNT10BO00744 389 aa22■■□□□ 1.11
PTPN7-209ENST00000477554 GNAI2P04899 355 aa22■■□□□ 1.11
PTPN7-209ENST00000477554 VEGFBP49765 207 aa22■■□□□ 1.11
PTPN7-209ENST00000477554 MTX1Q13505 466 aa22■■□□□ 1.11
PTPN7-209ENST00000477554 FTSJ3Q8IY81 847 aaKnown RBP22■■□□□ 1.11
PTPN7-209ENST00000477554 ABT1Q9ULW3 272 aaKnown RBP22■■□□□ 1.11
PTPN7-209ENST00000477554 ZBTB7BO15156 539 aaPredicted RBP21.99■■□□□ 1.11
PTPN7-209ENST00000477554 ADORA1P30542 326 aa21.99■■□□□ 1.11
PTPN7-209ENST00000477554 CHAF1AQ13111 956 aaPredicted RBP21.99■■□□□ 1.11
PTPN7-209ENST00000477554 PUM3Q15397 648 aaKnown RBP21.99■■□□□ 1.11
PTPN7-209ENST00000477554 ZBED3Q96IU2 234 aaPredicted RBP21.99■■□□□ 1.11
PTPN7-209ENST00000477554 ARAP2Q8WZ64 1704 aa21.99■■□□□ 1.11
PTPN7-209ENST00000477554 CIAO1O76071 339 aa21.98■■□□□ 1.11
PTPN7-209ENST00000477554 C20orf194Q5TEA3 1177 aa21.98■■□□□ 1.11
PTPN7-209ENST00000477554 FAM205AQ6ZU69 1335 aa21.98■■□□□ 1.11
PTPN7-209ENST00000477554 MYO3BQ8WXR4 1341 aa21.98■■□□□ 1.11
PTPN7-209ENST00000477554 DCPSQ96C86 337 aaKnown RBP21.97■■□□□ 1.11
PTPN7-209ENST00000477554 RCAN3Q9UKA8 241 aa21.97■■□□□ 1.11
PTPN7-209ENST00000477554 RASSF10A6NK89 507 aa21.97■■□□□ 1.11
PTPN7-209ENST00000477554 TFCP2Q12800 502 aa21.97■■□□□ 1.11
PTPN7-209ENST00000477554 MFSD14BQ5SR56 506 aa21.97■■□□□ 1.11
PTPN7-209ENST00000477554 ATP2B3Q16720 1220 aa21.96■■□□□ 1.11
PTPN7-209ENST00000477554 CYP4F22Q6NT55 531 aa21.96■■□□□ 1.11
PTPN7-209ENST00000477554 CDCA5Q96FF9 252 aa21.96■■□□□ 1.11
PTPN7-209ENST00000477554 TLL2Q9Y6L7 1015 aa21.96■■□□□ 1.11
PTPN7-209ENST00000477554 MYH13Q9UKX3 1938 aa21.95■■□□□ 1.1
PTPN7-209ENST00000477554 IL15P40933 162 aaPredicted RBP21.95■■□□□ 1.1
PTPN7-209ENST00000477554 TIMM10P62072 90 aa21.95■■□□□ 1.1
PTPN7-209ENST00000477554 DEFB115Q30KQ5 88 aa21.95■■□□□ 1.1
PTPN7-209ENST00000477554 SAPCD2Q86UD0 394 aa21.95■■□□□ 1.1
PTPN7-209ENST00000477554 VPS37DQ86XT2 251 aa21.95■■□□□ 1.1
PTPN7-209ENST00000477554 OGFOD1Q8N543 542 aa21.95■■□□□ 1.1
PTPN7-209ENST00000477554 LPIN2Q92539 896 aa21.95■■□□□ 1.1
PTPN7-209ENST00000477554 PRMT6Q96LA8 375 aaPredicted RBP21.95■■□□□ 1.1
PTPN7-209ENST00000477554 CEP126Q9P2H0 1117 aa21.95■■□□□ 1.1
PTPN7-209ENST00000477554 IFIT1P09914 478 aaKnown RBP21.94■■□□□ 1.1
PTPN7-209ENST00000477554 SLC5A1P13866 664 aa21.94■■□□□ 1.1
PTPN7-209ENST00000477554 PHKA1P46020 1223 aa21.94■■□□□ 1.1
PTPN7-209ENST00000477554 GRM1Q13255 1194 aa21.94■■□□□ 1.1
PTPN7-209ENST00000477554 POLA2Q14181 598 aa21.94■■□□□ 1.1
PTPN7-209ENST00000477554 CFAP100Q494V2 611 aa21.94■■□□□ 1.1
PTPN7-209ENST00000477554 MOB2Q70IA6 237 aa21.94■■□□□ 1.1
PTPN7-209ENST00000477554 CAVIN4Q5BKX8 364 aa21.93■■□□□ 1.1
PTPN7-209ENST00000477554 SULF1Q8IWU6 871 aa21.93■■□□□ 1.1
PTPN7-209ENST00000477554 COG6Q9Y2V7 657 aa21.93■■□□□ 1.1
PTPN7-209ENST00000477554 ECM29Q5VYK3 1845 aa21.92■■□□□ 1.1
PTPN7-209ENST00000477554 CLRN2A0PK11 232 aa21.92■■□□□ 1.1
PTPN7-209ENST00000477554 FKBP1AP62942 108 aaKnown RBP21.92■■□□□ 1.1
PTPN7-209ENST00000477554 FBXO3Q9UK99 471 aa21.92■■□□□ 1.1
PTPN7-209ENST00000477554 TTF2Q9UNY4 1162 aaKnown RBP21.92■■□□□ 1.1
PTPN7-209ENST00000477554 FZD1Q9UP38 647 aa21.92■■□□□ 1.1
PTPN7-209ENST00000477554 HDAC5Q9UQL6 1122 aa21.92■■□□□ 1.1
PTPN7-209ENST00000477554 AOC2O75106 756 aa21.91■■□□□ 1.1
PTPN7-209ENST00000477554 ATP8B2P98198 1209 aa21.91■■□□□ 1.1
PTPN7-209ENST00000477554 ZIC5Q96T25 663 aa21.91■■□□□ 1.1
PTPN7-209ENST00000477554 HDAC9Q9UKV0 1011 aa21.91■■□□□ 1.1
PTPN7-209ENST00000477554 SPDYE2BA6NHP3 402 aa21.9■■□□□ 1.1
PTPN7-209ENST00000477554 SPDYE6P0CI01 402 aa21.9■■□□□ 1.1
PTPN7-209ENST00000477554 DLGAP5Q15398 846 aa21.9■■□□□ 1.1
PTPN7-209ENST00000477554 PAXIP1Q6ZW49 1069 aaPredicted RBP21.9■■□□□ 1.1
PTPN7-209ENST00000477554 SSH3Q8TE77 659 aa21.9■■□□□ 1.1
PTPN7-209ENST00000477554 PITPNM2Q9BZ72 1349 aa21.9■■□□□ 1.1
PTPN7-209ENST00000477554 WDR33Q9C0J8 1336 aaKnown RBP21.9■■□□□ 1.1
PTPN7-209ENST00000477554 A0A1B0GUL7 405 aa21.89■■□□□ 1.1
PTPN7-209ENST00000477554 FRAT2O75474 233 aaPredicted RBP21.89■■□□□ 1.1
PTPN7-209ENST00000477554 HSPA1AP0DMV8 641 aaKnown RBP21.89■■□□□ 1.1
PTPN7-209ENST00000477554 HSPA1BP0DMV9 641 aaKnown RBP21.89■■□□□ 1.1
PTPN7-209ENST00000477554 CEP85Q6P2H3 762 aa21.89■■□□□ 1.1
PTPN7-209ENST00000477554 CAPNS2Q96L46 248 aa21.89■■□□□ 1.1
PTPN7-209ENST00000477554 MTMR14Q8NCE2 650 aa21.89■■□□□ 1.09
PTPN7-209ENST00000477554 GBA2Q9HCG7 927 aaPredicted RBP21.89■■□□□ 1.09
PTPN7-209ENST00000477554 THSD7BQ9C0I4 1608 aa21.88■■□□□ 1.09
PTPN7-209ENST00000477554 RBM5P52756 815 aaKnown RBP eCLIP21.88■■□□□ 1.09
PTPN7-209ENST00000477554 HUNKP57058 714 aa21.88■■□□□ 1.09
PTPN7-209ENST00000477554 MVPQ14764 893 aaKnown RBP21.88■■□□□ 1.09
PTPN7-209ENST00000477554 CCDC102BQ68D86 513 aa21.88■■□□□ 1.09
PTPN7-209ENST00000477554 CDAN1Q8IWY9 1227 aa21.88■■□□□ 1.09
PTPN7-209ENST00000477554 XAGE2Q96GT9 111 aa21.88■■□□□ 1.09
PTPN7-209ENST00000477554 CRKP46108 304 aa21.87■■□□□ 1.09
PTPN7-209ENST00000477554 PI16Q6UXB8 463 aa21.87■■□□□ 1.09
PTPN7-209ENST00000477554 TDRD3Q9H7E2 651 aaKnown RBP21.87■■□□□ 1.09
PTPN7-209ENST00000477554 SSC5DA1L4H1 1573 aa21.87■■□□□ 1.09
PTPN7-209ENST00000477554 SIRT2Q8IXJ6 389 aa21.86■■□□□ 1.09
PTPN7-209ENST00000477554 PRDX5P30044 214 aa21.85■■□□□ 1.09
PTPN7-209ENST00000477554 CACNB3P54284 484 aa21.85■■□□□ 1.09
PTPN7-209ENST00000477554 G3BP1Q13283 466 aaKnown RBP eCLIP21.85■■□□□ 1.09
PTPN7-209ENST00000477554 RASGRF1Q13972 1273 aa21.85■■□□□ 1.09
PTPN7-209ENST00000477554 PRKG1Q13976 671 aa21.85■■□□□ 1.09
PTPN7-209ENST00000477554 NEUROD6Q96NK8 337 aa21.85■■□□□ 1.09
PTPN7-209ENST00000477554 VEZTQ9HBM0 779 aa21.85■■□□□ 1.09
PTPN7-209ENST00000477554 SURF6O75683 361 aaKnown RBP21.84■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms