RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 GORABQ5T7V8 394 aa18.8■□□□□ 0.6
SEC13-215ENST00000477547 CHADLQ6NUI6 762 aa18.8■□□□□ 0.6
SEC13-215ENST00000477547 DPY19L2Q6NUT2 758 aa18.8■□□□□ 0.6
SEC13-215ENST00000477547 JDP2Q8WYK2 163 aa18.8■□□□□ 0.6
SEC13-215ENST00000477547 CCDC8Q9H0W5 538 aaPredicted RBP18.8■□□□□ 0.6
SEC13-215ENST00000477547 COL1A1P02452 1464 aaPredicted RBP18.8■□□□□ 0.6
SEC13-215ENST00000477547 HIBADHP31937 336 aaKnown RBP18.79■□□□□ 0.6
SEC13-215ENST00000477547 PHKA1P46020 1223 aa18.79■□□□□ 0.6
SEC13-215ENST00000477547 LNPKQ9C0E8 428 aa18.79■□□□□ 0.6
SEC13-215ENST00000477547 COA1Q9GZY4 146 aa18.79■□□□□ 0.6
SEC13-215ENST00000477547 BCAMP50895 628 aa18.78■□□□□ 0.6
SEC13-215ENST00000477547 NUCB1Q02818 461 aa18.78■□□□□ 0.6
SEC13-215ENST00000477547 CCDC102BQ68D86 513 aa18.78■□□□□ 0.6
SEC13-215ENST00000477547 FAM84BQ96KN1 310 aaPredicted RBP18.78■□□□□ 0.6
SEC13-215ENST00000477547 FBXO33Q7Z6M2 555 aa18.77■□□□□ 0.6
SEC13-215ENST00000477547 CHD1LQ86WJ1 897 aa18.77■□□□□ 0.6
SEC13-215ENST00000477547 CD209Q9NNX6 404 aa18.77■□□□□ 0.6
SEC13-215ENST00000477547 PRDM10Q9NQV6 1147 aa18.77■□□□□ 0.6
SEC13-215ENST00000477547 IQSEC3Q9UPP2 1182 aaPredicted RBP18.77■□□□□ 0.6
SEC13-215ENST00000477547 CNTNAP1P78357 1384 aa18.76■□□□□ 0.59
SEC13-215ENST00000477547 TTC39AQ5SRH9 613 aa18.76■□□□□ 0.59
SEC13-215ENST00000477547 GPATCH3Q96I76 525 aa18.76■□□□□ 0.59
SEC13-215ENST00000477547 ZNRF3Q9ULT6 936 aa18.76■□□□□ 0.59
SEC13-215ENST00000477547 YDJCA8MPS7 323 aa18.75■□□□□ 0.59
SEC13-215ENST00000477547 DDNO94850 711 aaPredicted RBP18.75■□□□□ 0.59
SEC13-215ENST00000477547 IL1R1P14778 569 aa18.75■□□□□ 0.59
SEC13-215ENST00000477547 CCDC158Q5M9N0 1113 aa18.75■□□□□ 0.59
SEC13-215ENST00000477547 OTUD7AQ8TE49 926 aaPredicted RBP18.75■□□□□ 0.59
SEC13-215ENST00000477547 GNL3LQ9NVN8 582 aaKnown RBP18.75■□□□□ 0.59
SEC13-215ENST00000477547 ADAMTSL1Q8N6G6 1762 aa18.75■□□□□ 0.59
SEC13-215ENST00000477547 ZNF541Q9H0D2 1346 aa18.75■□□□□ 0.59
SEC13-215ENST00000477547 FRAT2O75474 233 aaPredicted RBP18.74■□□□□ 0.59
SEC13-215ENST00000477547 ARID4AP29374 1257 aaPredicted RBP18.74■□□□□ 0.59
SEC13-215ENST00000477547 CTCFP49711 727 aaPredicted RBP18.74■□□□□ 0.59
SEC13-215ENST00000477547 PODNQ7Z5L7 613 aa18.74■□□□□ 0.59
SEC13-215ENST00000477547 FBXW7Q969H0 707 aa18.74■□□□□ 0.59
SEC13-215ENST00000477547 SEMA3EO15041 775 aa18.74■□□□□ 0.59
SEC13-215ENST00000477547 UQCRFS1P1P0C7P4 283 aa18.74■□□□□ 0.59
SEC13-215ENST00000477547 MX1P20591 662 aa18.74■□□□□ 0.59
SEC13-215ENST00000477547 VEGFBP49765 207 aa18.74■□□□□ 0.59
SEC13-215ENST00000477547 EIF6P56537 245 aaKnown RBP18.74■□□□□ 0.59
SEC13-215ENST00000477547 RASGRF1Q13972 1273 aa18.74■□□□□ 0.59
SEC13-215ENST00000477547 TDRD7Q8NHU6 1098 aaKnown RBP18.74■□□□□ 0.59
SEC13-215ENST00000477547 GTF3C3Q9Y5Q9 886 aa18.74■□□□□ 0.59
SEC13-215ENST00000477547 SALL3Q9BXA9 1300 aa18.73■□□□□ 0.59
SEC13-215ENST00000477547 FZD9O00144 591 aa18.73■□□□□ 0.59
SEC13-215ENST00000477547 LBX1P52954 281 aa18.73■□□□□ 0.59
SEC13-215ENST00000477547 CHAF1AQ13111 956 aaPredicted RBP18.73■□□□□ 0.59
SEC13-215ENST00000477547 TSHZ3Q63HK5 1081 aa18.73■□□□□ 0.59
SEC13-215ENST00000477547 AIDAQ96BJ3 306 aa18.73■□□□□ 0.59
SEC13-215ENST00000477547 JAG2Q9Y219 1238 aa18.73■□□□□ 0.59
SEC13-215ENST00000477547 RAD17O75943 681 aa18.72■□□□□ 0.59
SEC13-215ENST00000477547 MCAMP43121 646 aa18.72■□□□□ 0.59
SEC13-215ENST00000477547 GTF2IP78347 998 aa18.72■□□□□ 0.59
SEC13-215ENST00000477547 SCARF1Q14162 830 aa18.72■□□□□ 0.59
SEC13-215ENST00000477547 ECHDC1Q9NTX5 307 aa18.72■□□□□ 0.59
SEC13-215ENST00000477547 TTC41PQ6P2S7 1318 aa18.71■□□□□ 0.59
SEC13-215ENST00000477547 PASKQ96RG2 1323 aa18.71■□□□□ 0.59
SEC13-215ENST00000477547 MYH2Q9UKX2 1941 aa18.71■□□□□ 0.59
SEC13-215ENST00000477547 SCN4AP35499 1836 aa18.71■□□□□ 0.59
SEC13-215ENST00000477547 ECM29Q5VYK3 1845 aa18.71■□□□□ 0.59
SEC13-215ENST00000477547 CXCL9Q07325 125 aa18.71■□□□□ 0.59
SEC13-215ENST00000477547 CIAPIN1Q6FI81 312 aa18.71■□□□□ 0.59
SEC13-215ENST00000477547 PI16Q6UXB8 463 aa18.71■□□□□ 0.59
SEC13-215ENST00000477547 ZNF512BQ96KM6 892 aaPredicted RBP18.71■□□□□ 0.59
SEC13-215ENST00000477547 KCNQ5Q9NR82 932 aa18.71■□□□□ 0.59
SEC13-215ENST00000477547 DENND2AQ9ULE3 1009 aa18.71■□□□□ 0.59
SEC13-215ENST00000477547 PDS5AQ29RF7 1337 aaKnown RBP18.7■□□□□ 0.58
SEC13-215ENST00000477547 FAM205AQ6ZU69 1335 aa18.7■□□□□ 0.58
SEC13-215ENST00000477547 USP17L3A6NCW0 530 aa18.7■□□□□ 0.58
SEC13-215ENST00000477547 USP17L4A6NCW7 530 aa18.7■□□□□ 0.58
SEC13-215ENST00000477547 PSMD14O00487 310 aa18.7■□□□□ 0.58
SEC13-215ENST00000477547 PDE4AP27815 886 aa18.7■□□□□ 0.58
SEC13-215ENST00000477547 USP17L1Q7RTZ2 530 aa18.7■□□□□ 0.58
SEC13-215ENST00000477547 HMG20BQ9P0W2 317 aa18.7■□□□□ 0.58
SEC13-215ENST00000477547 ZBTB22O15209 634 aa18.69■□□□□ 0.58
SEC13-215ENST00000477547 TNIP1Q15025 636 aa18.69■□□□□ 0.58
SEC13-215ENST00000477547 STRIP1Q5VSL9 837 aa18.69■□□□□ 0.58
SEC13-215ENST00000477547 SPATA5Q8NB90 893 aa18.69■□□□□ 0.58
SEC13-215ENST00000477547 SNRKQ9NRH2 765 aa18.69■□□□□ 0.58
SEC13-215ENST00000477547 WBP1LQ9NX94 342 aa18.69■□□□□ 0.58
SEC13-215ENST00000477547 GJA3Q9Y6H8 435 aa18.69■□□□□ 0.58
SEC13-215ENST00000477547 AOX1Q06278 1338 aa18.69■□□□□ 0.58
SEC13-215ENST00000477547 ERC2O15083 957 aa18.68■□□□□ 0.58
SEC13-215ENST00000477547 ATP5JP18859 108 aa18.68■□□□□ 0.58
SEC13-215ENST00000477547 PDE1AP54750 535 aa18.68■□□□□ 0.58
SEC13-215ENST00000477547 MFSD14BQ5SR56 506 aa18.68■□□□□ 0.58
SEC13-215ENST00000477547 DACT2Q5SW24 774 aa18.68■□□□□ 0.58
SEC13-215ENST00000477547 TTLL5Q6EMB2 1281 aa18.68■□□□□ 0.58
SEC13-215ENST00000477547 LDHDQ86WU2 507 aa18.68■□□□□ 0.58
SEC13-215ENST00000477547 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.68■□□□□ 0.58
SEC13-215ENST00000477547 ABHD8Q96I13 439 aa18.68■□□□□ 0.58
SEC13-215ENST00000477547 DNAJC2Q99543 621 aaKnown RBP18.68■□□□□ 0.58
SEC13-215ENST00000477547 MYO3BQ8WXR4 1341 aa18.68■□□□□ 0.58
SEC13-215ENST00000477547 TMEM88BA6NKF7 163 aa18.67■□□□□ 0.58
SEC13-215ENST00000477547 GLRX3O76003 335 aaKnown RBP18.67■□□□□ 0.58
SEC13-215ENST00000477547 ZAP70P43403 619 aa18.67■□□□□ 0.58
SEC13-215ENST00000477547 PLEKHM2Q8IWE5 1019 aa18.67■□□□□ 0.58
SEC13-215ENST00000477547 GPC2Q8N158 579 aa18.67■□□□□ 0.58
SEC13-215ENST00000477547 WDR66Q8TBY9 1149 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms