RNA–Protein interactions for RNA: ENST00000477541.1

HLA-DMA-208, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

Gene HLA-DMA, Length 1,735 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-208ENST00000477541 FILIP1Q7Z7B0 1213 aa15.73■□□□□ 0.11
HLA-DMA-208ENST00000477541 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.73■□□□□ 0.11
HLA-DMA-208ENST00000477541 USP27XA6NNY8 438 aa15.72■□□□□ 0.11
HLA-DMA-208ENST00000477541 CCDC93Q567U6 631 aa15.72■□□□□ 0.11
HLA-DMA-208ENST00000477541 STOX1Q6ZVD7 989 aa15.72■□□□□ 0.11
HLA-DMA-208ENST00000477541 NBPF11Q86T75 865 aa15.72■□□□□ 0.11
HLA-DMA-208ENST00000477541 SDF4Q9BRK5 362 aa15.72■□□□□ 0.11
HLA-DMA-208ENST00000477541 ARGLU1Q9NWB6 273 aaPredicted RBP15.72■□□□□ 0.11
HLA-DMA-208ENST00000477541 PCDHA7Q9UN72 937 aa15.72■□□□□ 0.11
HLA-DMA-208ENST00000477541 LRP5O75197 1615 aa15.72■□□□□ 0.11
HLA-DMA-208ENST00000477541 PDIA3P30101 505 aaKnown RBP15.71■□□□□ 0.11
HLA-DMA-208ENST00000477541 PSME1Q06323 249 aa15.71■□□□□ 0.11
HLA-DMA-208ENST00000477541 FBXO38Q6PIJ6 1188 aa15.71■□□□□ 0.11
HLA-DMA-208ENST00000477541 ANKRD13DQ6ZTN6 518 aa15.71■□□□□ 0.11
HLA-DMA-208ENST00000477541 LINC00301Q8NCQ3 95 aa15.71■□□□□ 0.11
HLA-DMA-208ENST00000477541 ANKRD24Q8TF21 1146 aa15.71■□□□□ 0.11
HLA-DMA-208ENST00000477541 MYD88Q99836 296 aa15.71■□□□□ 0.11
HLA-DMA-208ENST00000477541 ABCC12Q96J65 1359 aa15.71■□□□□ 0.11
HLA-DMA-208ENST00000477541 E7EWF7 191 aa15.71■□□□□ 0.1
HLA-DMA-208ENST00000477541 DTNBO60941 627 aa15.71■□□□□ 0.1
HLA-DMA-208ENST00000477541 AIMP1Q12904 312 aaKnown RBP15.71■□□□□ 0.1
HLA-DMA-208ENST00000477541 EPHA10Q5JZY3 1008 aa15.71■□□□□ 0.1
HLA-DMA-208ENST00000477541 XAGE3Q8WTP9 111 aa15.71■□□□□ 0.1
HLA-DMA-208ENST00000477541 PPP1R13BQ96KQ4 1090 aa15.71■□□□□ 0.1
HLA-DMA-208ENST00000477541 DNAJC2Q99543 621 aaKnown RBP15.71■□□□□ 0.1
HLA-DMA-208ENST00000477541 SLC52A2Q9HAB3 445 aa15.71■□□□□ 0.1
HLA-DMA-208ENST00000477541 TRPM3Q9HCF6 1732 aaPredicted RBP15.71■□□□□ 0.1
HLA-DMA-208ENST00000477541 PAG1Q9NWQ8 432 aa15.71■□□□□ 0.1
HLA-DMA-208ENST00000477541 PARP4Q9UKK3 1724 aaKnown RBP15.7■□□□□ 0.1
HLA-DMA-208ENST00000477541 APOBRQ0VD83 1088 aa15.7■□□□□ 0.1
HLA-DMA-208ENST00000477541 STK38Q15208 465 aa15.7■□□□□ 0.1
HLA-DMA-208ENST00000477541 ELF2Q15723 593 aa15.7■□□□□ 0.1
HLA-DMA-208ENST00000477541 E4F1Q66K89 784 aaPredicted RBP15.7■□□□□ 0.1
HLA-DMA-208ENST00000477541 DBNDD2Q9BQY9 259 aa15.7■□□□□ 0.1
HLA-DMA-208ENST00000477541 EP400Q96L91 3159 aa15.7■□□□□ 0.1
HLA-DMA-208ENST00000477541 GOLGA6L9A6NEM1 432 aa15.69■□□□□ 0.1
HLA-DMA-208ENST00000477541 GCP02774 474 aa15.69■□□□□ 0.1
HLA-DMA-208ENST00000477541 SLC3A2P08195 630 aaKnown RBP15.69■□□□□ 0.1
HLA-DMA-208ENST00000477541 CMA1P23946 247 aa15.69■□□□□ 0.1
HLA-DMA-208ENST00000477541 CEBPZQ03701 1054 aaKnown RBP15.69■□□□□ 0.1
HLA-DMA-208ENST00000477541 ARID5BQ14865 1188 aa15.69■□□□□ 0.1
HLA-DMA-208ENST00000477541 SF3A1Q15459 793 aaKnown RBP15.69■□□□□ 0.1
HLA-DMA-208ENST00000477541 COPS6Q7L5N1 327 aa15.69■□□□□ 0.1
HLA-DMA-208ENST00000477541 EDC3Q96F86 508 aaKnown RBP15.69■□□□□ 0.1
HLA-DMA-208ENST00000477541 ATG3Q9NT62 314 aa15.69■□□□□ 0.1
HLA-DMA-208ENST00000477541 TRPC5Q9UL62 973 aaPredicted RBP15.69■□□□□ 0.1
HLA-DMA-208ENST00000477541 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.69■□□□□ 0.1
HLA-DMA-208ENST00000477541 ERBB3P21860 1342 aa15.69■□□□□ 0.1
HLA-DMA-208ENST00000477541 SPTLC2O15270 562 aa15.68■□□□□ 0.1
HLA-DMA-208ENST00000477541 ZFYP08048 801 aaPredicted RBP15.68■□□□□ 0.1
HLA-DMA-208ENST00000477541 SNRPA1P09661 255 aaKnown RBP15.68■□□□□ 0.1
HLA-DMA-208ENST00000477541 IL15P40933 162 aaPredicted RBP15.68■□□□□ 0.1
HLA-DMA-208ENST00000477541 CCDC129Q6ZRS4 1044 aa15.68■□□□□ 0.1
HLA-DMA-208ENST00000477541 LRP10Q7Z4F1 713 aa15.68■□□□□ 0.1
HLA-DMA-208ENST00000477541 ELOA2Q8IYF1 753 aaPredicted RBP15.68■□□□□ 0.1
HLA-DMA-208ENST00000477541 JMYQ8N9B5 988 aa15.68■□□□□ 0.1
HLA-DMA-208ENST00000477541 CALCOCO1Q9P1Z2 691 aa15.68■□□□□ 0.1
HLA-DMA-208ENST00000477541 FAM237AA0A1B0GTK4 181 aa15.68■□□□□ 0.1
HLA-DMA-208ENST00000477541 PRAMEF22A3QJZ6 481 aa15.68■□□□□ 0.1
HLA-DMA-208ENST00000477541 RNF113AO15541 343 aaKnown RBP15.68■□□□□ 0.1
HLA-DMA-208ENST00000477541 HSPD1P10809 573 aaKnown RBP15.68■□□□□ 0.1
HLA-DMA-208ENST00000477541 ETF1P62495 437 aaKnown RBP15.68■□□□□ 0.1
HLA-DMA-208ENST00000477541 NAA30Q147X3 362 aaPredicted RBP15.68■□□□□ 0.1
HLA-DMA-208ENST00000477541 TMC6Q7Z403 805 aa15.68■□□□□ 0.1
HLA-DMA-208ENST00000477541 FBXO18Q8NFZ0 1043 aa15.68■□□□□ 0.1
HLA-DMA-208ENST00000477541 KLHDC4Q8TBB5 520 aa15.68■□□□□ 0.1
HLA-DMA-208ENST00000477541 XPO4Q9C0E2 1151 aaKnown RBP15.68■□□□□ 0.1
HLA-DMA-208ENST00000477541 MAP3K15Q6ZN16 1313 aa15.68■□□□□ 0.1
HLA-DMA-208ENST00000477541 KDM6AO15550 1401 aaPredicted RBP15.67■□□□□ 0.1
HLA-DMA-208ENST00000477541 CIAO1O76071 339 aa15.67■□□□□ 0.1
HLA-DMA-208ENST00000477541 SMC2O95347 1197 aa15.67■□□□□ 0.1
HLA-DMA-208ENST00000477541 CASP7P55210 303 aa15.67■□□□□ 0.1
HLA-DMA-208ENST00000477541 MYSM1Q5VVJ2 828 aa15.67■□□□□ 0.1
HLA-DMA-208ENST00000477541 ARMCX5Q6P1M9 558 aa15.67■□□□□ 0.1
HLA-DMA-208ENST00000477541 DDX46Q7L014 1031 aaKnown RBP15.67■□□□□ 0.1
HLA-DMA-208ENST00000477541 PLBD2Q8NHP8 589 aa15.67■□□□□ 0.1
HLA-DMA-208ENST00000477541 C8orf76Q96K31 380 aa15.67■□□□□ 0.1
HLA-DMA-208ENST00000477541 SEC62Q99442 399 aaKnown RBP15.67■□□□□ 0.1
HLA-DMA-208ENST00000477541 TRMT1Q9NXH9 659 aaKnown RBP15.67■□□□□ 0.1
HLA-DMA-208ENST00000477541 IFNKQ9P0W0 207 aa15.67■□□□□ 0.1
HLA-DMA-208ENST00000477541 FBXO3Q9UK99 471 aa15.67■□□□□ 0.1
HLA-DMA-208ENST00000477541 NEDD4P46934 1319 aa15.67■□□□□ 0.1
HLA-DMA-208ENST00000477541 PKD1L3Q7Z443 1732 aa15.67■□□□□ 0.1
HLA-DMA-208ENST00000477541 ATRNO75882 1429 aa15.67■□□□□ 0.1
HLA-DMA-208ENST00000477541 NUP188Q5SRE5 1749 aa15.66■□□□□ 0.1
HLA-DMA-208ENST00000477541 ZSCAN12O43309 604 aa15.66■□□□□ 0.1
HLA-DMA-208ENST00000477541 NDUFA8P51970 172 aa15.66■□□□□ 0.1
HLA-DMA-208ENST00000477541 SYNE3Q6ZMZ3 975 aa15.66■□□□□ 0.1
HLA-DMA-208ENST00000477541 FNBP4Q8N3X1 1017 aaPredicted RBP15.66■□□□□ 0.1
HLA-DMA-208ENST00000477541 NOL10Q9BSC4 688 aaKnown RBP15.66■□□□□ 0.1
HLA-DMA-208ENST00000477541 DNAI1Q9UI46 699 aa15.66■□□□□ 0.1
HLA-DMA-208ENST00000477541 TUBE1Q9UJT0 475 aa15.66■□□□□ 0.1
HLA-DMA-208ENST00000477541 USP21Q9UK80 565 aa15.66■□□□□ 0.1
HLA-DMA-208ENST00000477541 C4AP0C0L4 1744 aa15.66■□□□□ 0.1
HLA-DMA-208ENST00000477541 C4BP0C0L5 1744 aa15.66■□□□□ 0.1
HLA-DMA-208ENST00000477541 PPP6R2O75170 966 aa15.65■□□□□ 0.1
HLA-DMA-208ENST00000477541 FDPSP14324 419 aaKnown RBP15.65■□□□□ 0.1
HLA-DMA-208ENST00000477541 NCAPHQ15003 741 aa15.65■□□□□ 0.1
HLA-DMA-208ENST00000477541 DPCR1Q3MIW9 517 aa15.65■□□□□ 0.1
HLA-DMA-208ENST00000477541 LRRC2Q9BYS8 371 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms