RNA–Protein interactions for RNA: ENST00000477429.1

COL4A5-204, Transcript of collagen type IV alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL4A5, Length 564 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-204ENST00000477429 GTF2IP78347 998 aa12.64□□□□□ -0.39
COL4A5-204ENST00000477429 RALBP1Q15311 655 aa12.64□□□□□ -0.39
COL4A5-204ENST00000477429 G2E3Q7L622 706 aa12.64□□□□□ -0.39
COL4A5-204ENST00000477429 PTPN18Q99952 460 aa12.64□□□□□ -0.39
COL4A5-204ENST00000477429 PRO3102Q9H379 93 aa12.64□□□□□ -0.39
COL4A5-204ENST00000477429 PI4KAP2A4QPH2 592 aa12.63□□□□□ -0.39
COL4A5-204ENST00000477429 SREBF2Q12772 1141 aa12.63□□□□□ -0.39
COL4A5-204ENST00000477429 TTLL5Q6EMB2 1281 aa12.63□□□□□ -0.39
COL4A5-204ENST00000477429 CDAN1Q8IWY9 1227 aa12.63□□□□□ -0.39
COL4A5-204ENST00000477429 PI4KAP1Q8N8J0 262 aa12.63□□□□□ -0.39
COL4A5-204ENST00000477429 CD99L2Q8TCZ2 262 aa12.63□□□□□ -0.39
COL4A5-204ENST00000477429 WNK4Q96J92 1243 aa12.63□□□□□ -0.39
COL4A5-204ENST00000477429 COA1Q9GZY4 146 aa12.63□□□□□ -0.39
COL4A5-204ENST00000477429 MYBBP1AQ9BQG0 1328 aaKnown RBP12.62□□□□□ -0.39
COL4A5-204ENST00000477429 APAF1O14727 1248 aa12.62□□□□□ -0.39
COL4A5-204ENST00000477429 CASP7P55210 303 aa12.62□□□□□ -0.39
COL4A5-204ENST00000477429 ARMC9Q7Z3E5 817 aa12.62□□□□□ -0.39
COL4A5-204ENST00000477429 OGFOD1Q8N543 542 aa12.62□□□□□ -0.39
COL4A5-204ENST00000477429 CDC5LQ99459 802 aaKnown RBP12.62□□□□□ -0.39
COL4A5-204ENST00000477429 DEFB129Q9H1M3 183 aa12.62□□□□□ -0.39
COL4A5-204ENST00000477429 JAG2Q9Y219 1238 aa12.62□□□□□ -0.39
COL4A5-204ENST00000477429 ZNF804BA4D1E1 1349 aa12.62□□□□□ -0.39
COL4A5-204ENST00000477429 LAMA2P24043 3122 aaKnown RBP12.61□□□□□ -0.39
COL4A5-204ENST00000477429 CLRN2A0PK11 232 aa12.61□□□□□ -0.39
COL4A5-204ENST00000477429 NEURL1BA8MQ27 555 aa12.61□□□□□ -0.39
COL4A5-204ENST00000477429 H7C1W4 665 aa12.61□□□□□ -0.39
COL4A5-204ENST00000477429 NF2P35240 595 aa12.61□□□□□ -0.39
COL4A5-204ENST00000477429 CRHR2Q13324 411 aa12.61□□□□□ -0.39
COL4A5-204ENST00000477429 MAP3K11Q16584 847 aa12.61□□□□□ -0.39
COL4A5-204ENST00000477429 NBPF12Q5TAG4 269 aaPredicted RBP12.61□□□□□ -0.39
COL4A5-204ENST00000477429 UBE3BQ7Z3V4 1068 aa12.61□□□□□ -0.39
COL4A5-204ENST00000477429 HELBQ8NG08 1087 aaPredicted RBP12.61□□□□□ -0.39
COL4A5-204ENST00000477429 IFT57Q9NWB7 429 aa12.61□□□□□ -0.39
COL4A5-204ENST00000477429 PTPN22Q9Y2R2 807 aa12.61□□□□□ -0.39
COL4A5-204ENST00000477429 EYSQ5T1H1 3165 aa12.61□□□□□ -0.39
COL4A5-204ENST00000477429 TAF5LO75529 589 aa12.6□□□□□ -0.39
COL4A5-204ENST00000477429 USP2O75604 605 aaPredicted RBP12.6□□□□□ -0.39
COL4A5-204ENST00000477429 KSR2Q6VAB6 950 aa12.6□□□□□ -0.39
COL4A5-204ENST00000477429 APOBEC3FQ8IUX4 373 aaKnown RBP12.6□□□□□ -0.39
COL4A5-204ENST00000477429 TSR2Q969E8 191 aaKnown RBP12.6□□□□□ -0.39
COL4A5-204ENST00000477429 SLC10A4Q96EP9 437 aa12.6□□□□□ -0.39
COL4A5-204ENST00000477429 PRMT6Q96LA8 375 aaPredicted RBP12.6□□□□□ -0.39
COL4A5-204ENST00000477429 CD209Q9NNX6 404 aa12.6□□□□□ -0.39
COL4A5-204ENST00000477429 STXBP5LQ9Y2K9 1186 aa12.6□□□□□ -0.39
COL4A5-204ENST00000477429 U3KPZ7 1027 aaPredicted RBP12.6□□□□□ -0.39
COL4A5-204ENST00000477429 MYO3BQ8WXR4 1341 aa12.6□□□□□ -0.39
COL4A5-204ENST00000477429 MANSC4A6NHS7 340 aaPredicted RBP12.59□□□□□ -0.39
COL4A5-204ENST00000477429 F8W031 263 aaPredicted RBP12.59□□□□□ -0.39
COL4A5-204ENST00000477429 ITGA6P23229 1130 aa12.59□□□□□ -0.39
COL4A5-204ENST00000477429 CHRNDQ07001 517 aa12.59□□□□□ -0.39
COL4A5-204ENST00000477429 DDX10Q13206 875 aaKnown RBP12.59□□□□□ -0.39
COL4A5-204ENST00000477429 WDR43Q15061 677 aaKnown RBP eCLIP12.59□□□□□ -0.39
COL4A5-204ENST00000477429 SAMD1Q6SPF0 538 aaPredicted RBP12.59□□□□□ -0.39
COL4A5-204ENST00000477429 LEMD3Q9Y2U8 911 aa12.59□□□□□ -0.39
COL4A5-204ENST00000477429 LAMB1P07942 1786 aa12.58□□□□□ -0.39
COL4A5-204ENST00000477429 CSF1RP07333 972 aa12.58□□□□□ -0.4
COL4A5-204ENST00000477429 HSP90B1P14625 803 aaKnown RBP12.58□□□□□ -0.4
COL4A5-204ENST00000477429 CFAP100Q494V2 611 aa12.58□□□□□ -0.4
COL4A5-204ENST00000477429 Q7L0L9 218 aa12.58□□□□□ -0.4
COL4A5-204ENST00000477429 ARMC5Q96C12 935 aa12.58□□□□□ -0.4
COL4A5-204ENST00000477429 ZSWIM8A7E2V4 1837 aa12.58□□□□□ -0.4
COL4A5-204ENST00000477429 MYH3P11055 1940 aa12.57□□□□□ -0.4
COL4A5-204ENST00000477429 SPDYE2BA6NHP3 402 aa12.57□□□□□ -0.4
COL4A5-204ENST00000477429 SPDYE6P0CI01 402 aa12.57□□□□□ -0.4
COL4A5-204ENST00000477429 ZBTB48P10074 688 aaPredicted RBP12.57□□□□□ -0.4
COL4A5-204ENST00000477429 GNAI1P63096 354 aa12.57□□□□□ -0.4
COL4A5-204ENST00000477429 DLGAP5Q15398 846 aa12.57□□□□□ -0.4
COL4A5-204ENST00000477429 MTMR14Q8NCE2 650 aa12.57□□□□□ -0.4
COL4A5-204ENST00000477429 MS4A4AQ96JQ5 239 aa12.57□□□□□ -0.4
COL4A5-204ENST00000477429 OTOFQ9HC10 1997 aa12.57□□□□□ -0.4
COL4A5-204ENST00000477429 PRUNE2Q8WUY3 3088 aa12.57□□□□□ -0.4
COL4A5-204ENST00000477429 TESPA1A2RU30 521 aaPredicted RBP12.56□□□□□ -0.4
COL4A5-204ENST00000477429 ALDH1A1P00352 501 aa12.56□□□□□ -0.4
COL4A5-204ENST00000477429 MYCP01106 439 aaPredicted RBP12.56□□□□□ -0.4
COL4A5-204ENST00000477429 IGHMBP2P38935 993 aaKnown RBP12.56□□□□□ -0.4
COL4A5-204ENST00000477429 GCKRQ14397 625 aa12.56□□□□□ -0.4
COL4A5-204ENST00000477429 EPHA10Q5JZY3 1008 aa12.56□□□□□ -0.4
COL4A5-204ENST00000477429 CCDC30Q5VVM6 783 aa12.56□□□□□ -0.4
COL4A5-204ENST00000477429 BRI3BPQ8WY22 251 aa12.56□□□□□ -0.4
COL4A5-204ENST00000477429 PLA2G12BQ9BX93 195 aa12.56□□□□□ -0.4
COL4A5-204ENST00000477429 ELP3Q9H9T3 547 aa12.56□□□□□ -0.4
COL4A5-204ENST00000477429 VEZTQ9HBM0 779 aa12.56□□□□□ -0.4
COL4A5-204ENST00000477429 COL1A1P02452 1464 aaPredicted RBP12.56□□□□□ -0.4
COL4A5-204ENST00000477429 A0A1B0GUL6 1792 aa12.56□□□□□ -0.4
COL4A5-204ENST00000477429 DDX58O95786 925 aaKnown RBP12.55□□□□□ -0.4
COL4A5-204ENST00000477429 INHBEP58166 350 aa12.55□□□□□ -0.4
COL4A5-204ENST00000477429 FOXO4P98177 505 aa12.55□□□□□ -0.4
COL4A5-204ENST00000477429 RASA3Q14644 834 aa12.55□□□□□ -0.4
COL4A5-204ENST00000477429 GRIK5Q16478 980 aa12.55□□□□□ -0.4
COL4A5-204ENST00000477429 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.55□□□□□ -0.4
COL4A5-204ENST00000477429 ZNF594Q96JF6 807 aaPredicted RBP12.55□□□□□ -0.4
COL4A5-204ENST00000477429 ZNF333Q96JL9 665 aa12.55□□□□□ -0.4
COL4A5-204ENST00000477429 TEPSINQ96N21 525 aa12.55□□□□□ -0.4
COL4A5-204ENST00000477429 ARHGAP39Q9C0H5 1083 aa12.55□□□□□ -0.4
COL4A5-204ENST00000477429 EFCC1Q9HA90 598 aa12.55□□□□□ -0.4
COL4A5-204ENST00000477429 PTCH2Q9Y6C5 1203 aa12.55□□□□□ -0.4
COL4A5-204ENST00000477429 PIEZO1Q92508 2521 aa12.55□□□□□ -0.4
COL4A5-204ENST00000477429 IL1R1P14778 569 aa12.54□□□□□ -0.4
COL4A5-204ENST00000477429 SP3Q02447 781 aa12.54□□□□□ -0.4
COL4A5-204ENST00000477429 CCDC184Q52MB2 194 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms