RNA–Protein interactions for RNA: ENST00000476970.1

PRPF3-205, Transcript of pre-mRNA processing factor 3, humanhuman

TSL 2

Gene PRPF3, Length 1,005 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF3-205ENST00000476970 PTPN18Q99952 460 aa9.59□□□□□ -0.87
PRPF3-205ENST00000476970 COA1Q9GZY4 146 aa9.59□□□□□ -0.87
PRPF3-205ENST00000476970 SEC31BQ9NQW1 1179 aa9.59□□□□□ -0.87
PRPF3-205ENST00000476970 FZD1Q9UP38 647 aa9.59□□□□□ -0.87
PRPF3-205ENST00000476970 ATP5J2-PTCD1G3V325 749 aa9.58□□□□□ -0.88
PRPF3-205ENST00000476970 GJA5P36382 358 aa9.58□□□□□ -0.88
PRPF3-205ENST00000476970 GJA8P48165 433 aa9.58□□□□□ -0.88
PRPF3-205ENST00000476970 GTF2A2P52657 109 aa9.58□□□□□ -0.88
PRPF3-205ENST00000476970 TRIM28Q13263 835 aaKnown RBP9.58□□□□□ -0.88
PRPF3-205ENST00000476970 DLGAP5Q15398 846 aa9.58□□□□□ -0.88
PRPF3-205ENST00000476970 KIAA0825Q8IV33 1275 aa9.58□□□□□ -0.88
PRPF3-205ENST00000476970 DEFB123Q8N688 67 aa9.58□□□□□ -0.88
PRPF3-205ENST00000476970 OPTNQ96CV9 577 aa9.58□□□□□ -0.88
PRPF3-205ENST00000476970 ZBED3Q96IU2 234 aaPredicted RBP9.58□□□□□ -0.88
PRPF3-205ENST00000476970 CDC5LQ99459 802 aaKnown RBP9.58□□□□□ -0.88
PRPF3-205ENST00000476970 COL25A1Q9BXS0 654 aaPredicted RBP9.58□□□□□ -0.88
PRPF3-205ENST00000476970 PNNQ9H307 717 aaKnown RBP9.58□□□□□ -0.88
PRPF3-205ENST00000476970 CCL15-CCL14A0A0B4J2E2 113 aa9.57□□□□□ -0.88
PRPF3-205ENST00000476970 EVI5O60447 810 aa9.57□□□□□ -0.88
PRPF3-205ENST00000476970 FARP2O94887 1054 aaPredicted RBP9.57□□□□□ -0.88
PRPF3-205ENST00000476970 GJB1P08034 283 aa9.57□□□□□ -0.88
PRPF3-205ENST00000476970 CAPN2P17655 700 aa9.57□□□□□ -0.88
PRPF3-205ENST00000476970 LACTBP83111 547 aaPredicted RBP9.57□□□□□ -0.88
PRPF3-205ENST00000476970 CCL15Q16663 113 aa9.57□□□□□ -0.88
PRPF3-205ENST00000476970 TTLL5Q6EMB2 1281 aa9.57□□□□□ -0.88
PRPF3-205ENST00000476970 UBE2Q1Q7Z7E8 422 aa9.57□□□□□ -0.88
PRPF3-205ENST00000476970 ZBTB38Q8NAP3 1195 aaPredicted RBP9.57□□□□□ -0.88
PRPF3-205ENST00000476970 MXD3Q9BW11 206 aa9.57□□□□□ -0.88
PRPF3-205ENST00000476970 ZCCHC17Q9NP64 241 aaKnown RBP9.57□□□□□ -0.88
PRPF3-205ENST00000476970 HAX1O00165 279 aa9.56□□□□□ -0.88
PRPF3-205ENST00000476970 TLR2O60603 784 aa9.56□□□□□ -0.88
PRPF3-205ENST00000476970 PDE8AO60658 829 aa9.56□□□□□ -0.88
PRPF3-205ENST00000476970 HOXD10P28358 340 aa9.56□□□□□ -0.88
PRPF3-205ENST00000476970 PPP2R1AP30153 589 aa9.56□□□□□ -0.88
PRPF3-205ENST00000476970 FXR2P51116 673 aaKnown RBP eCLIP9.56□□□□□ -0.88
PRPF3-205ENST00000476970 UBXN2AP68543 259 aa9.56□□□□□ -0.88
PRPF3-205ENST00000476970 TNFAIP1Q13829 316 aa9.56□□□□□ -0.88
PRPF3-205ENST00000476970 MTFR1Q15390 333 aa9.56□□□□□ -0.88
PRPF3-205ENST00000476970 MTMR14Q8NCE2 650 aa9.56□□□□□ -0.88
PRPF3-205ENST00000476970 HELBQ8NG08 1087 aaPredicted RBP9.56□□□□□ -0.88
PRPF3-205ENST00000476970 RAET1EQ8TD07 263 aa9.56□□□□□ -0.88
PRPF3-205ENST00000476970 BRI3BPQ8WY22 251 aa9.56□□□□□ -0.88
PRPF3-205ENST00000476970 MS4A4AQ96JQ5 239 aa9.56□□□□□ -0.88
PRPF3-205ENST00000476970 ELP3Q9H9T3 547 aa9.56□□□□□ -0.88
PRPF3-205ENST00000476970 CHPF2Q9P2E5 772 aa9.56□□□□□ -0.88
PRPF3-205ENST00000476970 ALPK3Q96L96 1907 aa9.56□□□□□ -0.88
PRPF3-205ENST00000476970 ARAP2Q8WZ64 1704 aa9.56□□□□□ -0.88
PRPF3-205ENST00000476970 PITPNM1O00562 1244 aa9.55□□□□□ -0.88
PRPF3-205ENST00000476970 USP2O75604 605 aaPredicted RBP9.55□□□□□ -0.88
PRPF3-205ENST00000476970 HOXB7P09629 217 aa9.55□□□□□ -0.88
PRPF3-205ENST00000476970 GRK4P32298 578 aa9.55□□□□□ -0.88
PRPF3-205ENST00000476970 CCT4P50991 539 aaKnown RBP9.55□□□□□ -0.88
PRPF3-205ENST00000476970 LMOD3Q0VAK6 560 aa9.55□□□□□ -0.88
PRPF3-205ENST00000476970 HDGFL1Q5TGJ6 251 aa9.55□□□□□ -0.88
PRPF3-205ENST00000476970 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.55□□□□□ -0.88
PRPF3-205ENST00000476970 TRIM47Q96LD4 638 aa9.55□□□□□ -0.88
PRPF3-205ENST00000476970 RNF208Q9H0X6 261 aa9.55□□□□□ -0.88
PRPF3-205ENST00000476970 VEZTQ9HBM0 779 aa9.55□□□□□ -0.88
PRPF3-205ENST00000476970 DBF4Q9UBU7 674 aaPredicted RBP9.55□□□□□ -0.88
PRPF3-205ENST00000476970 CSADQ9Y600 493 aa9.55□□□□□ -0.88
PRPF3-205ENST00000476970 MGAMO43451 1857 aa9.55□□□□□ -0.88
PRPF3-205ENST00000476970 TTC28Q96AY4 2481 aa9.54□□□□□ -0.88
PRPF3-205ENST00000476970 PCCAP05165 728 aaPredicted RBP9.54□□□□□ -0.88
PRPF3-205ENST00000476970 CCL5P13501 91 aa9.54□□□□□ -0.88
PRPF3-205ENST00000476970 GOLGA2Q08379 1002 aa9.54□□□□□ -0.88
PRPF3-205ENST00000476970 NBPF12Q5TAG4 269 aaPredicted RBP9.54□□□□□ -0.88
PRPF3-205ENST00000476970 FAM43AQ8N2R8 423 aa9.54□□□□□ -0.88
PRPF3-205ENST00000476970 PLEKHF1Q96S99 279 aa9.54□□□□□ -0.88
PRPF3-205ENST00000476970 ARHGAP39Q9C0H5 1083 aa9.54□□□□□ -0.88
PRPF3-205ENST00000476970 BSDC1Q9NW68 430 aaPredicted RBP9.54□□□□□ -0.88
PRPF3-205ENST00000476970 HYPKQ9NX55 129 aa9.54□□□□□ -0.88
PRPF3-205ENST00000476970 BIN2Q9UBW5 565 aaPredicted RBP9.54□□□□□ -0.88
PRPF3-205ENST00000476970 SRRDQ9UH36 339 aa9.54□□□□□ -0.88
PRPF3-205ENST00000476970 LEMD3Q9Y2U8 911 aa9.54□□□□□ -0.88
PRPF3-205ENST00000476970 RIPOR2Q9Y4F9 1068 aa9.54□□□□□ -0.88
PRPF3-205ENST00000476970 CLRN2A0PK11 232 aa9.53□□□□□ -0.88
PRPF3-205ENST00000476970 SPDYE2BA6NHP3 402 aa9.53□□□□□ -0.88
PRPF3-205ENST00000476970 SPDYE6P0CI01 402 aa9.53□□□□□ -0.88
PRPF3-205ENST00000476970 CETPP11597 493 aa9.53□□□□□ -0.88
PRPF3-205ENST00000476970 BMP8BP34820 402 aa9.53□□□□□ -0.88
PRPF3-205ENST00000476970 GTF2IP78347 998 aa9.53□□□□□ -0.88
PRPF3-205ENST00000476970 LRIT3Q3SXY7 679 aa9.53□□□□□ -0.88
PRPF3-205ENST00000476970 RIC3Q7Z5B4 369 aa9.53□□□□□ -0.88
PRPF3-205ENST00000476970 CCDC191Q8NCU4 936 aa9.53□□□□□ -0.88
PRPF3-205ENST00000476970 U2AF1L4Q8WU68 220 aaKnown RBP9.53□□□□□ -0.88
PRPF3-205ENST00000476970 CCDC85AQ96PX6 553 aaPredicted RBP9.53□□□□□ -0.88
PRPF3-205ENST00000476970 STAP2Q9UGK3 403 aa9.53□□□□□ -0.88
PRPF3-205ENST00000476970 MINPP1Q9UNW1 487 aa9.53□□□□□ -0.88
PRPF3-205ENST00000476970 MYPNQ86TC9 1320 aa9.53□□□□□ -0.88
PRPF3-205ENST00000476970 PSMC4P43686 418 aa9.52□□□□□ -0.89
PRPF3-205ENST00000476970 RASA3Q14644 834 aa9.52□□□□□ -0.89
PRPF3-205ENST00000476970 CFAP100Q494V2 611 aa9.52□□□□□ -0.89
PRPF3-205ENST00000476970 Q7L0L9 218 aa9.52□□□□□ -0.89
PRPF3-205ENST00000476970 SLAIN1Q8ND83 568 aa9.52□□□□□ -0.89
PRPF3-205ENST00000476970 ANKRD2Q9GZV1 360 aa9.52□□□□□ -0.89
PRPF3-205ENST00000476970 PRDM6Q9NQX0 595 aa9.52□□□□□ -0.89
PRPF3-205ENST00000476970 MTMR10Q9NXD2 777 aa9.52□□□□□ -0.89
PRPF3-205ENST00000476970 CWC25Q9NXE8 425 aaPredicted RBP9.52□□□□□ -0.89
PRPF3-205ENST00000476970 VCANP13611 3396 aa9.52□□□□□ -0.89
PRPF3-205ENST00000476970 FMNL1O95466 1100 aaPredicted RBP9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms