RNA–Protein interactions for RNA: ENST00000476544.1

RAB5A-208, Transcript of RAB5A, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5A, Length 532 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5A-208ENST00000476544 CREBZFQ9NS37 354 aa17.02■□□□□ 0.32
RAB5A-208ENST00000476544 IQSEC3Q9UPP2 1182 aaPredicted RBP17.02■□□□□ 0.32
RAB5A-208ENST00000476544 AOX1Q06278 1338 aa17.01■□□□□ 0.31
RAB5A-208ENST00000476544 ADORA1P30542 326 aa17.01■□□□□ 0.31
RAB5A-208ENST00000476544 FKBP1AP62942 108 aaKnown RBP17.01■□□□□ 0.31
RAB5A-208ENST00000476544 TFCP2Q12800 502 aa17.01■□□□□ 0.31
RAB5A-208ENST00000476544 CDC37L1Q7L3B6 337 aa17.01■□□□□ 0.31
RAB5A-208ENST00000476544 SCAF8Q9UPN6 1271 aaKnown RBP17.01■□□□□ 0.31
RAB5A-208ENST00000476544 COG6Q9Y2V7 657 aa17.01■□□□□ 0.31
RAB5A-208ENST00000476544 TMEM88BA6NKF7 163 aa17■□□□□ 0.31
RAB5A-208ENST00000476544 WNT10BO00744 389 aa17■□□□□ 0.31
RAB5A-208ENST00000476544 SIRT2Q8IXJ6 389 aa17■□□□□ 0.31
RAB5A-208ENST00000476544 KLRG1Q96E93 195 aa17■□□□□ 0.31
RAB5A-208ENST00000476544 ZBTB40Q9NUA8 1239 aa17■□□□□ 0.31
RAB5A-208ENST00000476544 ADM5C9JUS6 153 aa16.99■□□□□ 0.31
RAB5A-208ENST00000476544 IFIT1P09914 478 aaKnown RBP16.99■□□□□ 0.31
RAB5A-208ENST00000476544 MVPQ14764 893 aaKnown RBP16.99■□□□□ 0.31
RAB5A-208ENST00000476544 PRMT6Q96LA8 375 aaPredicted RBP16.99■□□□□ 0.31
RAB5A-208ENST00000476544 YTHDC1Q96MU7 727 aaKnown RBP16.99■□□□□ 0.31
RAB5A-208ENST00000476544 NOP58Q9Y2X3 529 aaKnown RBP16.99■□□□□ 0.31
RAB5A-208ENST00000476544 MYO3BQ8WXR4 1341 aa16.98■□□□□ 0.31
RAB5A-208ENST00000476544 ATP2B3Q16720 1220 aa16.98■□□□□ 0.31
RAB5A-208ENST00000476544 CAVIN4Q5BKX8 364 aa16.98■□□□□ 0.31
RAB5A-208ENST00000476544 ANGEL2Q5VTE6 544 aaKnown RBP16.98■□□□□ 0.31
RAB5A-208ENST00000476544 CEP85Q6P2H3 762 aa16.98■□□□□ 0.31
RAB5A-208ENST00000476544 KRT26Q7Z3Y9 468 aa16.98■□□□□ 0.31
RAB5A-208ENST00000476544 JMYQ8N9B5 988 aa16.98■□□□□ 0.31
RAB5A-208ENST00000476544 GGA3Q9NZ52 723 aa16.98■□□□□ 0.31
RAB5A-208ENST00000476544 SPEF2Q9C093 1822 aa16.98■□□□□ 0.31
RAB5A-208ENST00000476544 F8W031 263 aaPredicted RBP16.97■□□□□ 0.31
RAB5A-208ENST00000476544 SLC5A1P13866 664 aa16.97■□□□□ 0.31
RAB5A-208ENST00000476544 PHKA1P46020 1223 aa16.97■□□□□ 0.31
RAB5A-208ENST00000476544 PDE3AQ14432 1141 aa16.97■□□□□ 0.31
RAB5A-208ENST00000476544 OGFOD1Q8N543 542 aa16.97■□□□□ 0.31
RAB5A-208ENST00000476544 MTMR14Q8NCE2 650 aa16.97■□□□□ 0.31
RAB5A-208ENST00000476544 MKRN1Q9UHC7 482 aaKnown RBP16.97■□□□□ 0.31
RAB5A-208ENST00000476544 MMP14P50281 582 aa16.96■□□□□ 0.31
RAB5A-208ENST00000476544 MFSD14BQ5SR56 506 aa16.96■□□□□ 0.31
RAB5A-208ENST00000476544 PRAMEF18Q5VWM3 479 aa16.96■□□□□ 0.31
RAB5A-208ENST00000476544 DCPSQ96C86 337 aaKnown RBP16.96■□□□□ 0.31
RAB5A-208ENST00000476544 A0A1B0GUL7 405 aa16.95■□□□□ 0.3
RAB5A-208ENST00000476544 RASSF10A6NK89 507 aa16.95■□□□□ 0.3
RAB5A-208ENST00000476544 CELF2O95319 508 aaKnown RBP16.95■□□□□ 0.3
RAB5A-208ENST00000476544 MS4A1P11836 297 aa16.95■□□□□ 0.3
RAB5A-208ENST00000476544 CHAF1AQ13111 956 aaPredicted RBP16.95■□□□□ 0.3
RAB5A-208ENST00000476544 CCDC102BQ68D86 513 aa16.95■□□□□ 0.3
RAB5A-208ENST00000476544 VPS37DQ86XT2 251 aa16.95■□□□□ 0.3
RAB5A-208ENST00000476544 XAGE2Q96GT9 111 aa16.95■□□□□ 0.3
RAB5A-208ENST00000476544 ZBTB22O15209 634 aa16.94■□□□□ 0.3
RAB5A-208ENST00000476544 SURF6O75683 361 aaKnown RBP16.94■□□□□ 0.3
RAB5A-208ENST00000476544 VEGFBP49765 207 aa16.94■□□□□ 0.3
RAB5A-208ENST00000476544 G3BP1Q13283 466 aaKnown RBP eCLIP16.94■□□□□ 0.3
RAB5A-208ENST00000476544 CFAP100Q494V2 611 aa16.94■□□□□ 0.3
RAB5A-208ENST00000476544 SPDYE2BA6NHP3 402 aa16.93■□□□□ 0.3
RAB5A-208ENST00000476544 SPDYE6P0CI01 402 aa16.93■□□□□ 0.3
RAB5A-208ENST00000476544 DLGAP5Q15398 846 aa16.93■□□□□ 0.3
RAB5A-208ENST00000476544 SAPCD2Q86UD0 394 aa16.93■□□□□ 0.3
RAB5A-208ENST00000476544 MRIQ9BWK5 157 aa16.93■□□□□ 0.3
RAB5A-208ENST00000476544 HDAC9Q9UKV0 1011 aa16.93■□□□□ 0.3
RAB5A-208ENST00000476544 TTF2Q9UNY4 1162 aaKnown RBP16.93■□□□□ 0.3
RAB5A-208ENST00000476544 TLL2Q9Y6L7 1015 aa16.93■□□□□ 0.3
RAB5A-208ENST00000476544 CNTNAP1P78357 1384 aa16.92■□□□□ 0.3
RAB5A-208ENST00000476544 PCNTO95613 3336 aa16.92■□□□□ 0.3
RAB5A-208ENST00000476544 ZNF646O15015 1829 aaPredicted RBP16.92■□□□□ 0.3
RAB5A-208ENST00000476544 DEFB115Q30KQ5 88 aa16.92■□□□□ 0.3
RAB5A-208ENST00000476544 SULF1Q8IWU6 871 aa16.92■□□□□ 0.3
RAB5A-208ENST00000476544 CDCA5Q96FF9 252 aa16.92■□□□□ 0.3
RAB5A-208ENST00000476544 DDX19BQ9UMR2 479 aa16.92■□□□□ 0.3
RAB5A-208ENST00000476544 AKAP2Q9Y2D5 859 aa16.92■□□□□ 0.3
RAB5A-208ENST00000476544 PITPNM2Q9BZ72 1349 aa16.92■□□□□ 0.3
RAB5A-208ENST00000476544 COL1A1P02452 1464 aaPredicted RBP16.92■□□□□ 0.3
RAB5A-208ENST00000476544 FRAT2O75474 233 aaPredicted RBP16.91■□□□□ 0.3
RAB5A-208ENST00000476544 NEUROD6Q96NK8 337 aa16.91■□□□□ 0.3
RAB5A-208ENST00000476544 ZNF408Q9H9D4 720 aa16.91■□□□□ 0.3
RAB5A-208ENST00000476544 SERPINA10Q9UK55 444 aa16.91■□□□□ 0.3
RAB5A-208ENST00000476544 A0A1B0GUL6 1792 aa16.9■□□□□ 0.3
RAB5A-208ENST00000476544 CRKP46108 304 aa16.9■□□□□ 0.3
RAB5A-208ENST00000476544 RASGRF1Q13972 1273 aa16.9■□□□□ 0.3
RAB5A-208ENST00000476544 APOBEC3HQ6NTF7 200 aaKnown RBP16.9■□□□□ 0.3
RAB5A-208ENST00000476544 MOB2Q70IA6 237 aa16.9■□□□□ 0.3
RAB5A-208ENST00000476544 RPAP2Q8IXW5 612 aaPredicted RBP16.9■□□□□ 0.3
RAB5A-208ENST00000476544 TBC1D22AQ8WUA7 517 aa16.9■□□□□ 0.3
RAB5A-208ENST00000476544 EAF2Q96CJ1 260 aaPredicted RBP16.9■□□□□ 0.3
RAB5A-208ENST00000476544 GPR108Q9NPR9 543 aa16.9■□□□□ 0.3
RAB5A-208ENST00000476544 CLRN2A0PK11 232 aa16.89■□□□□ 0.29
RAB5A-208ENST00000476544 HDLBPQ00341 1268 aaKnown RBP16.89■□□□□ 0.29
RAB5A-208ENST00000476544 TNNI3KQ59H18 835 aa16.89■□□□□ 0.29
RAB5A-208ENST00000476544 WDR66Q8TBY9 1149 aa16.89■□□□□ 0.29
RAB5A-208ENST00000476544 DBNDD2Q9BQY9 259 aa16.89■□□□□ 0.29
RAB5A-208ENST00000476544 TDRD3Q9H7E2 651 aaKnown RBP16.89■□□□□ 0.29
RAB5A-208ENST00000476544 ZNF70Q9UC06 446 aaPredicted RBP16.89■□□□□ 0.29
RAB5A-208ENST00000476544 ABT1Q9ULW3 272 aaKnown RBP16.89■□□□□ 0.29
RAB5A-208ENST00000476544 EXOC6BQ9Y2D4 811 aa16.89■□□□□ 0.29
RAB5A-208ENST00000476544 FPGT-TNNI3KV9GXZ4 949 aa16.89■□□□□ 0.29
RAB5A-208ENST00000476544 PRDX5P30044 214 aa16.88■□□□□ 0.29
RAB5A-208ENST00000476544 CYP4F22Q6NT55 531 aa16.88■□□□□ 0.29
RAB5A-208ENST00000476544 PI16Q6UXB8 463 aa16.88■□□□□ 0.29
RAB5A-208ENST00000476544 ZNF384Q8TF68 577 aa16.88■□□□□ 0.29
RAB5A-208ENST00000476544 ZIC5Q96T25 663 aa16.88■□□□□ 0.29
RAB5A-208ENST00000476544 DEFB129Q9H1M3 183 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms