RNA–Protein interactions for RNA: ENST00000476494.1

CLDN4-205, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-205ENST00000476494 NLRP10Q86W26 655 aa8.54□□□□□ -1.04
CLDN4-205ENST00000476494 ANKRD13AQ8IZ07 590 aa8.54□□□□□ -1.04
CLDN4-205ENST00000476494 OPTNQ96CV9 577 aa8.54□□□□□ -1.04
CLDN4-205ENST00000476494 PHACTR3Q96KR7 559 aa8.54□□□□□ -1.04
CLDN4-205ENST00000476494 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.54□□□□□ -1.04
CLDN4-205ENST00000476494 RRP7AQ9Y3A4 280 aaKnown RBP8.54□□□□□ -1.04
CLDN4-205ENST00000476494 FAM205AQ6ZU69 1335 aa8.54□□□□□ -1.04
CLDN4-205ENST00000476494 ADGRA2Q96PE1 1338 aa8.54□□□□□ -1.04
CLDN4-205ENST00000476494 MGAMO43451 1857 aa8.53□□□□□ -1.04
CLDN4-205ENST00000476494 CCL15-CCL14A0A0B4J2E2 113 aa8.53□□□□□ -1.04
CLDN4-205ENST00000476494 TFRCP02786 760 aaKnown RBP8.53□□□□□ -1.04
CLDN4-205ENST00000476494 MMP14P50281 582 aa8.53□□□□□ -1.04
CLDN4-205ENST00000476494 UBXN2AP68543 259 aa8.53□□□□□ -1.04
CLDN4-205ENST00000476494 KIF22Q14807 665 aa8.53□□□□□ -1.04
CLDN4-205ENST00000476494 CCL15Q16663 113 aa8.53□□□□□ -1.04
CLDN4-205ENST00000476494 NBPF12Q5TAG4 269 aaPredicted RBP8.53□□□□□ -1.04
CLDN4-205ENST00000476494 ZNF697Q5TEC3 545 aa8.53□□□□□ -1.04
CLDN4-205ENST00000476494 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.53□□□□□ -1.04
CLDN4-205ENST00000476494 NECAB2Q7Z6G3 386 aa8.53□□□□□ -1.04
CLDN4-205ENST00000476494 MIER1Q8N108 512 aa8.53□□□□□ -1.04
CLDN4-205ENST00000476494 RAET1EQ8TD07 263 aa8.53□□□□□ -1.04
CLDN4-205ENST00000476494 DEFB118Q96PH6 123 aa8.53□□□□□ -1.04
CLDN4-205ENST00000476494 PANK3Q9H999 370 aa8.53□□□□□ -1.04
CLDN4-205ENST00000476494 ZCCHC17Q9NP64 241 aaKnown RBP8.53□□□□□ -1.04
CLDN4-205ENST00000476494 DNAH12Q6ZR08 3092 aa8.53□□□□□ -1.04
CLDN4-205ENST00000476494 ECM29Q5VYK3 1845 aa8.52□□□□□ -1.04
CLDN4-205ENST00000476494 BTBD19C9JJ37 291 aa8.52□□□□□ -1.05
CLDN4-205ENST00000476494 CCER2I3L3R5 266 aa8.52□□□□□ -1.05
CLDN4-205ENST00000476494 MYL6BP14649 208 aa8.52□□□□□ -1.05
CLDN4-205ENST00000476494 GTF2A2P52657 109 aa8.52□□□□□ -1.05
CLDN4-205ENST00000476494 RPS8P62241 208 aaKnown RBP8.52□□□□□ -1.05
CLDN4-205ENST00000476494 PDIA6Q15084 440 aa8.52□□□□□ -1.05
CLDN4-205ENST00000476494 HELBQ8NG08 1087 aaPredicted RBP8.52□□□□□ -1.05
CLDN4-205ENST00000476494 ELP3Q9H9T3 547 aa8.52□□□□□ -1.05
CLDN4-205ENST00000476494 GABRQQ9UN88 632 aa8.52□□□□□ -1.05
CLDN4-205ENST00000476494 PPP2R3BQ9Y5P8 575 aa8.52□□□□□ -1.05
CLDN4-205ENST00000476494 MYPNQ86TC9 1320 aa8.52□□□□□ -1.05
CLDN4-205ENST00000476494 SH3TC1Q8TE82 1336 aa8.52□□□□□ -1.05
CLDN4-205ENST00000476494 MYO9BQ13459 2157 aa8.51□□□□□ -1.05
CLDN4-205ENST00000476494 PER1O15534 1290 aaPredicted RBP8.51□□□□□ -1.05
CLDN4-205ENST00000476494 UFL1O94874 794 aa8.51□□□□□ -1.05
CLDN4-205ENST00000476494 IREB2P48200 963 aaKnown RBP8.51□□□□□ -1.05
CLDN4-205ENST00000476494 PRKCZQ05513 592 aa8.51□□□□□ -1.05
CLDN4-205ENST00000476494 RALBP1Q15311 655 aa8.51□□□□□ -1.05
CLDN4-205ENST00000476494 OGFOD1Q8N543 542 aa8.51□□□□□ -1.05
CLDN4-205ENST00000476494 ANKLE1Q8NAG6 615 aa8.51□□□□□ -1.05
CLDN4-205ENST00000476494 SLAIN1Q8ND83 568 aa8.51□□□□□ -1.05
CLDN4-205ENST00000476494 LRFN3Q9BTN0 628 aa8.51□□□□□ -1.05
CLDN4-205ENST00000476494 KNSTRNQ9Y448 316 aa8.51□□□□□ -1.05
CLDN4-205ENST00000476494 ZNF804BA4D1E1 1349 aa8.51□□□□□ -1.05
CLDN4-205ENST00000476494 AOX1Q06278 1338 aa8.51□□□□□ -1.05
CLDN4-205ENST00000476494 DIAPH1O60610 1272 aaKnown RBP8.5□□□□□ -1.05
CLDN4-205ENST00000476494 HOXD10P28358 340 aa8.5□□□□□ -1.05
CLDN4-205ENST00000476494 SUPT20HL1Q3ZLR7 823 aa8.5□□□□□ -1.05
CLDN4-205ENST00000476494 STRIP1Q5VSL9 837 aa8.5□□□□□ -1.05
CLDN4-205ENST00000476494 MCM10Q7L590 875 aa8.5□□□□□ -1.05
CLDN4-205ENST00000476494 MTMR14Q8NCE2 650 aa8.5□□□□□ -1.05
CLDN4-205ENST00000476494 C1QTNF1Q9BXJ1 281 aa8.5□□□□□ -1.05
CLDN4-205ENST00000476494 MIS18AQ9NYP9 233 aa8.5□□□□□ -1.05
CLDN4-205ENST00000476494 BIN2Q9UBW5 565 aaPredicted RBP8.5□□□□□ -1.05
CLDN4-205ENST00000476494 TRMT112Q9UI30 125 aaKnown RBP8.5□□□□□ -1.05
CLDN4-205ENST00000476494 CPA4Q9UI42 421 aa8.5□□□□□ -1.05
CLDN4-205ENST00000476494 GGA1Q9UJY5 639 aa8.5□□□□□ -1.05
CLDN4-205ENST00000476494 PCDHAC2Q9Y5I4 1007 aa8.5□□□□□ -1.05
CLDN4-205ENST00000476494 PFASO15067 1338 aa8.5□□□□□ -1.05
CLDN4-205ENST00000476494 TCF20Q9UGU0 1960 aaKnown RBP8.5□□□□□ -1.05
CLDN4-205ENST00000476494 DDX60LQ5H9U9 1706 aaKnown RBP8.49□□□□□ -1.05
CLDN4-205ENST00000476494 INHAP05111 366 aa8.49□□□□□ -1.05
CLDN4-205ENST00000476494 FOSL2P15408 326 aa8.49□□□□□ -1.05
CLDN4-205ENST00000476494 ELNP15502 786 aa8.49□□□□□ -1.05
CLDN4-205ENST00000476494 MDM2Q00987 491 aaPredicted RBP8.49□□□□□ -1.05
CLDN4-205ENST00000476494 ADAMTS19Q8TE59 1207 aa8.49□□□□□ -1.05
CLDN4-205ENST00000476494 PXYLP1Q8TE99 480 aa8.49□□□□□ -1.05
CLDN4-205ENST00000476494 ATXN2LQ8WWM7 1075 aaKnown RBP8.49□□□□□ -1.05
CLDN4-205ENST00000476494 ASB2Q96Q27 587 aa8.49□□□□□ -1.05
CLDN4-205ENST00000476494 THUMPD2Q9BTF0 503 aaKnown RBP8.49□□□□□ -1.05
CLDN4-205ENST00000476494 NBPF3Q9H094 633 aa8.49□□□□□ -1.05
CLDN4-205ENST00000476494 PRKRIP1Q9H875 184 aaPredicted RBP8.49□□□□□ -1.05
CLDN4-205ENST00000476494 MYO3BQ8WXR4 1341 aa8.49□□□□□ -1.05
CLDN4-205ENST00000476494 G3V3G9 751 aa8.48□□□□□ -1.05
CLDN4-205ENST00000476494 ADCY3O60266 1144 aa8.48□□□□□ -1.05
CLDN4-205ENST00000476494 FMNL1O95466 1100 aaPredicted RBP8.48□□□□□ -1.05
CLDN4-205ENST00000476494 EIF4A1P60842 406 aaKnown RBP8.48□□□□□ -1.05
CLDN4-205ENST00000476494 VGLL4Q14135 290 aa8.48□□□□□ -1.05
CLDN4-205ENST00000476494 DCTN1Q14203 1278 aa8.48□□□□□ -1.05
CLDN4-205ENST00000476494 TAF7Q15545 349 aaPredicted RBP8.48□□□□□ -1.05
CLDN4-205ENST00000476494 DCAF8Q5TAQ9 597 aa8.48□□□□□ -1.05
CLDN4-205ENST00000476494 TEPSINQ96N21 525 aa8.48□□□□□ -1.05
CLDN4-205ENST00000476494 P2RX7Q99572 595 aaKnown RBP8.48□□□□□ -1.05
CLDN4-205ENST00000476494 SPDYE5A6NIY4 337 aa8.47□□□□□ -1.05
CLDN4-205ENST00000476494 BCRP11274 1271 aa8.47□□□□□ -1.05
CLDN4-205ENST00000476494 CETPP11597 493 aa8.47□□□□□ -1.05
CLDN4-205ENST00000476494 COL6A1P12109 1028 aa8.47□□□□□ -1.05
CLDN4-205ENST00000476494 IRF5Q13568 498 aa8.47□□□□□ -1.05
CLDN4-205ENST00000476494 PROSER3Q2NL68 480 aa8.47□□□□□ -1.05
CLDN4-205ENST00000476494 AMER1Q5JTC6 1135 aaPredicted RBP8.47□□□□□ -1.05
CLDN4-205ENST00000476494 CDAN1Q8IWY9 1227 aa8.47□□□□□ -1.05
CLDN4-205ENST00000476494 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.47□□□□□ -1.05
CLDN4-205ENST00000476494 UHRF1Q96T88 793 aaPredicted RBP8.47□□□□□ -1.05
CLDN4-205ENST00000476494 C11orf16Q9NQ32 467 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms