RNA–Protein interactions for RNA: ENST00000476467.1

PSMB4-204, Transcript of proteasome subunit beta 4, humanhuman

TSL 2

Gene PSMB4, Length 2,067 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-204ENST00000476467 IQSEC3Q9UPP2 1182 aaPredicted RBP16.07■□□□□ 0.16
PSMB4-204ENST00000476467 GOLGB1Q14789 3259 aaKnown RBP16.07■□□□□ 0.16
PSMB4-204ENST00000476467 FRAT2O75474 233 aaPredicted RBP16.07■□□□□ 0.16
PSMB4-204ENST00000476467 DOK7Q18PE1 504 aa16.07■□□□□ 0.16
PSMB4-204ENST00000476467 BMP2KLQ5H9B9 411 aa16.07■□□□□ 0.16
PSMB4-204ENST00000476467 LARGE2Q8N3Y3 721 aa16.07■□□□□ 0.16
PSMB4-204ENST00000476467 SPATA5Q8NB90 893 aa16.07■□□□□ 0.16
PSMB4-204ENST00000476467 DNAJC2Q99543 621 aaKnown RBP16.07■□□□□ 0.16
PSMB4-204ENST00000476467 COL4A5P29400 1685 aa16.07■□□□□ 0.16
PSMB4-204ENST00000476467 SEC24BO95487 1268 aa16.06■□□□□ 0.16
PSMB4-204ENST00000476467 PI16Q6UXB8 463 aa16.06■□□□□ 0.16
PSMB4-204ENST00000476467 DBNDD1Q9H9R9 158 aa16.06■□□□□ 0.16
PSMB4-204ENST00000476467 SNRKQ9NRH2 765 aa16.06■□□□□ 0.16
PSMB4-204ENST00000476467 CHD4Q14839 1912 aa16.06■□□□□ 0.16
PSMB4-204ENST00000476467 ECE2O60344 883 aa16.06■□□□□ 0.16
PSMB4-204ENST00000476467 ZAP70P43403 619 aa16.06■□□□□ 0.16
PSMB4-204ENST00000476467 GPR162Q16538 588 aa16.06■□□□□ 0.16
PSMB4-204ENST00000476467 PODNQ7Z5L7 613 aa16.06■□□□□ 0.16
PSMB4-204ENST00000476467 AK9Q5TCS8 1911 aa16.05■□□□□ 0.16
PSMB4-204ENST00000476467 PAG1Q9NWQ8 432 aa16.05■□□□□ 0.16
PSMB4-204ENST00000476467 MAP4K4O95819 1239 aaPredicted RBP16.04■□□□□ 0.16
PSMB4-204ENST00000476467 NIM1KQ8IY84 436 aa16.04■□□□□ 0.16
PSMB4-204ENST00000476467 CNTROBQ8N137 903 aa16.04■□□□□ 0.16
PSMB4-204ENST00000476467 NDUFB9Q9Y6M9 179 aa16.04■□□□□ 0.16
PSMB4-204ENST00000476467 PSME4Q14997 1843 aa16.04■□□□□ 0.16
PSMB4-204ENST00000476467 CCDC88AQ3V6T2 1871 aa16.04■□□□□ 0.16
PSMB4-204ENST00000476467 SCN9AQ15858 1988 aa16.04■□□□□ 0.16
PSMB4-204ENST00000476467 TRIM6-TRIM34B2RNG4 842 aa16.04■□□□□ 0.16
PSMB4-204ENST00000476467 GOLIM4O00461 696 aa16.04■□□□□ 0.16
PSMB4-204ENST00000476467 GRIN3BO60391 1043 aa16.04■□□□□ 0.16
PSMB4-204ENST00000476467 CHAF1AQ13111 956 aaPredicted RBP16.04■□□□□ 0.16
PSMB4-204ENST00000476467 EVI5LQ96CN4 794 aa16.04■□□□□ 0.16
PSMB4-204ENST00000476467 SBF1O95248 1867 aa16.04■□□□□ 0.16
PSMB4-204ENST00000476467 FAM205AQ6ZU69 1335 aa16.04■□□□□ 0.16
PSMB4-204ENST00000476467 DICER1Q9UPY3 1922 aaKnown RBP16.04■□□□□ 0.16
PSMB4-204ENST00000476467 DOCK2Q92608 1830 aa16.03■□□□□ 0.16
PSMB4-204ENST00000476467 SDSP20132 328 aa16.03■□□□□ 0.16
PSMB4-204ENST00000476467 PRELPP51888 382 aa16.03■□□□□ 0.16
PSMB4-204ENST00000476467 TTF1Q15361 905 aaPredicted RBP16.03■□□□□ 0.16
PSMB4-204ENST00000476467 WDR66Q8TBY9 1149 aa16.03■□□□□ 0.16
PSMB4-204ENST00000476467 EDC3Q96F86 508 aaKnown RBP16.03■□□□□ 0.16
PSMB4-204ENST00000476467 ZNF646O15015 1829 aaPredicted RBP16.03■□□□□ 0.16
PSMB4-204ENST00000476467 CYP2E1P05181 493 aaPredicted RBP16.03■□□□□ 0.16
PSMB4-204ENST00000476467 LMNB1P20700 586 aa16.03■□□□□ 0.16
PSMB4-204ENST00000476467 JDP2Q8WYK2 163 aa16.03■□□□□ 0.16
PSMB4-204ENST00000476467 ANTXR1Q9H6X2 564 aa16.03■□□□□ 0.16
PSMB4-204ENST00000476467 SALL1Q9NSC2 1324 aa16.02■□□□□ 0.16
PSMB4-204ENST00000476467 YDJCA8MPS7 323 aa16.02■□□□□ 0.15
PSMB4-204ENST00000476467 RILPL2Q969X0 211 aa16.02■□□□□ 0.15
PSMB4-204ENST00000476467 ZNRF3Q9ULT6 936 aa16.02■□□□□ 0.15
PSMB4-204ENST00000476467 SLC4A3P48751 1232 aa16.01■□□□□ 0.15
PSMB4-204ENST00000476467 GTF2IP78347 998 aa16.01■□□□□ 0.15
PSMB4-204ENST00000476467 ZGPATQ8N5A5 531 aaKnown RBP16.01■□□□□ 0.15
PSMB4-204ENST00000476467 KBTBD3Q8NAB2 608 aa16.01■□□□□ 0.15
PSMB4-204ENST00000476467 TBC1D22AQ8WUA7 517 aa16.01■□□□□ 0.15
PSMB4-204ENST00000476467 PIH1D3Q9NQM4 214 aaKnown RBP16.01■□□□□ 0.15
PSMB4-204ENST00000476467 RFX7Q2KHR2 1363 aa16.01■□□□□ 0.15
PSMB4-204ENST00000476467 FSD1Q9BTV5 496 aa16.01■□□□□ 0.15
PSMB4-204ENST00000476467 JAG2Q9Y219 1238 aa16.01■□□□□ 0.15
PSMB4-204ENST00000476467 MYH7P12883 1935 aa16.01■□□□□ 0.15
PSMB4-204ENST00000476467 MYO5AQ9Y4I1 1855 aaKnown RBP16■□□□□ 0.15
PSMB4-204ENST00000476467 USP17L3A6NCW0 530 aa16■□□□□ 0.15
PSMB4-204ENST00000476467 USP17L4A6NCW7 530 aa16■□□□□ 0.15
PSMB4-204ENST00000476467 STRIP1Q5VSL9 837 aa16■□□□□ 0.15
PSMB4-204ENST00000476467 TTLL5Q6EMB2 1281 aa16■□□□□ 0.15
PSMB4-204ENST00000476467 USP17L1Q7RTZ2 530 aa16■□□□□ 0.15
PSMB4-204ENST00000476467 MAST2Q6P0Q8 1798 aa16■□□□□ 0.15
PSMB4-204ENST00000476467 TIAM2Q8IVF5 1701 aa16■□□□□ 0.15
PSMB4-204ENST00000476467 TBC1D9Q6ZT07 1266 aa15.99■□□□□ 0.15
PSMB4-204ENST00000476467 TICAM2Q86XR7 235 aa15.99■□□□□ 0.15
PSMB4-204ENST00000476467 FBXW7Q969H0 707 aa15.99■□□□□ 0.15
PSMB4-204ENST00000476467 DAXXQ9UER7 740 aaPredicted RBP15.99■□□□□ 0.15
PSMB4-204ENST00000476467 FKBP1AP62942 108 aaKnown RBP15.99■□□□□ 0.15
PSMB4-204ENST00000476467 MFSD14BQ5SR56 506 aa15.99■□□□□ 0.15
PSMB4-204ENST00000476467 DACT2Q5SW24 774 aa15.99■□□□□ 0.15
PSMB4-204ENST00000476467 SPTY2D1Q68D10 685 aaPredicted RBP15.99■□□□□ 0.15
PSMB4-204ENST00000476467 KCNQ5Q9NR82 932 aa15.99■□□□□ 0.15
PSMB4-204ENST00000476467 ABCF2Q9UG63 623 aa15.99■□□□□ 0.15
PSMB4-204ENST00000476467 IGSF3O75054 1194 aa15.98■□□□□ 0.15
PSMB4-204ENST00000476467 IDH1O75874 414 aaKnown RBP15.98■□□□□ 0.15
PSMB4-204ENST00000476467 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.98■□□□□ 0.15
PSMB4-204ENST00000476467 LRP2BPQ9P2M1 347 aa15.98■□□□□ 0.15
PSMB4-204ENST00000476467 FZD9O00144 591 aa15.98■□□□□ 0.15
PSMB4-204ENST00000476467 CDC45O75419 566 aa15.98■□□□□ 0.15
PSMB4-204ENST00000476467 MAP3K12Q12852 859 aa15.98■□□□□ 0.15
PSMB4-204ENST00000476467 LRRFIP1Q32MZ4 808 aaKnown RBP15.98■□□□□ 0.15
PSMB4-204ENST00000476467 RNF181Q9P0P0 153 aa15.98■□□□□ 0.15
PSMB4-204ENST00000476467 TBC1D32Q96NH3 1257 aa15.97■□□□□ 0.15
PSMB4-204ENST00000476467 SUGT1Q9Y2Z0 365 aa15.97■□□□□ 0.15
PSMB4-204ENST00000476467 MYO3BQ8WXR4 1341 aa15.96■□□□□ 0.15
PSMB4-204ENST00000476467 HIP1O00291 1037 aa15.96■□□□□ 0.15
PSMB4-204ENST00000476467 RAD17O75943 681 aa15.96■□□□□ 0.15
PSMB4-204ENST00000476467 LDHBP07195 334 aaKnown RBP15.96■□□□□ 0.15
PSMB4-204ENST00000476467 ZFYP08048 801 aaPredicted RBP15.96■□□□□ 0.15
PSMB4-204ENST00000476467 PRDX5P30044 214 aa15.96■□□□□ 0.15
PSMB4-204ENST00000476467 CXCL9Q07325 125 aa15.96■□□□□ 0.15
PSMB4-204ENST00000476467 CIAPIN1Q6FI81 312 aa15.96■□□□□ 0.15
PSMB4-204ENST00000476467 ZSCAN25Q6NSZ9 544 aa15.96■□□□□ 0.15
PSMB4-204ENST00000476467 CERS5Q8N5B7 392 aa15.96■□□□□ 0.15
PSMB4-204ENST00000476467 RAI14Q9P0K7 980 aa15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms