RNA–Protein interactions for RNA: ENST00000476135.5

HDAC9-223, Transcript of histone deacetylase 9, human

TSL 5

Gene HDAC9, Length 1,115 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HDAC9-223	ENST00000476135	CDHR5	Q9HBB8	845 aa		9.66	□□□□□ -0.86
HDAC9-223	ENST00000476135	DUOX1	Q9NRD9	1551 aa		9.66	□□□□□ -0.86
HDAC9-223	ENST00000476135	BRCA2	P51587	3418 aa		9.66	□□□□□ -0.86
HDAC9-223	ENST00000476135	ANKRD36C	Q5JPF3	1778 aa		9.65	□□□□□ -0.86
HDAC9-223	ENST00000476135	KDM3B	Q7LBC6	1761 aa		9.65	□□□□□ -0.86
HDAC9-223	ENST00000476135	ASTN2	O75129	1339 aa	Predicted RBP	9.65	□□□□□ -0.86
HDAC9-223	ENST00000476135	MAP3K15	Q6ZN16	1313 aa		9.65	□□□□□ -0.86
HDAC9-223	ENST00000476135	UBN2	Q6ZU65	1347 aa		9.65	□□□□□ -0.86
HDAC9-223	ENST00000476135	SMAP	O00193	183 aa		9.65	□□□□□ -0.86
HDAC9-223	ENST00000476135	ANGEL2	Q5VTE6	544 aa	Known RBP	9.65	□□□□□ -0.86
HDAC9-223	ENST00000476135	MOB2	Q70IA6	237 aa		9.65	□□□□□ -0.86
HDAC9-223	ENST00000476135	ZNF333	Q96JL9	665 aa		9.65	□□□□□ -0.86
HDAC9-223	ENST00000476135	TSR3	Q9UJK0	312 aa	Known RBP	9.65	□□□□□ -0.86
HDAC9-223	ENST00000476135	ZNF609	O15014	1411 aa		9.65	□□□□□ -0.87
HDAC9-223	ENST00000476135		A0A1W2PPC1	479 aa		9.64	□□□□□ -0.87
HDAC9-223	ENST00000476135	C3orf80	F5H4A9	247 aa		9.64	□□□□□ -0.87
HDAC9-223	ENST00000476135	RGS20	O76081	388 aa		9.64	□□□□□ -0.87
HDAC9-223	ENST00000476135	GPT	P24298	496 aa		9.64	□□□□□ -0.87
HDAC9-223	ENST00000476135	INHBE	P58166	350 aa		9.64	□□□□□ -0.87
HDAC9-223	ENST00000476135	SCARF1	Q14162	830 aa		9.64	□□□□□ -0.87
HDAC9-223	ENST00000476135	WASHC4	Q2M389	1173 aa		9.64	□□□□□ -0.87
HDAC9-223	ENST00000476135	TMC4	Q7Z404	712 aa		9.64	□□□□□ -0.87
HDAC9-223	ENST00000476135	PPP1R42	Q7Z4L9	355 aa		9.64	□□□□□ -0.87
HDAC9-223	ENST00000476135	ZNF34	Q8IZ26	560 aa		9.64	□□□□□ -0.87
HDAC9-223	ENST00000476135	NECTIN2	Q92692	538 aa		9.64	□□□□□ -0.87
HDAC9-223	ENST00000476135	DBNDD1	Q9H9R9	158 aa		9.64	□□□□□ -0.87
HDAC9-223	ENST00000476135	TSHZ2	Q9NRE2	1034 aa		9.64	□□□□□ -0.87
HDAC9-223	ENST00000476135	RANBP2	P49792	3224 aa	Known RBP	9.64	□□□□□ -0.87
HDAC9-223	ENST00000476135	LRRC37A	A6NMS7	1700 aa		9.64	□□□□□ -0.87
HDAC9-223	ENST00000476135	RTL9	Q8NET4	1388 aa		9.63	□□□□□ -0.87
HDAC9-223	ENST00000476135	LAMB4	A4D0S4	1761 aa		9.63	□□□□□ -0.87
HDAC9-223	ENST00000476135	LAMB2	P55268	1798 aa		9.63	□□□□□ -0.87
HDAC9-223	ENST00000476135	VIL1	P09327	827 aa	Known RBP	9.63	□□□□□ -0.87
HDAC9-223	ENST00000476135	ZNF280A	P59817	542 aa	Predicted RBP	9.63	□□□□□ -0.87
HDAC9-223	ENST00000476135	TCIRG1	Q13488	830 aa		9.63	□□□□□ -0.87
HDAC9-223	ENST00000476135	PARP10	Q53GL7	1025 aa		9.63	□□□□□ -0.87
HDAC9-223	ENST00000476135	KIF6	Q6ZMV9	814 aa		9.63	□□□□□ -0.87
HDAC9-223	ENST00000476135	NBPF11	Q86T75	865 aa		9.63	□□□□□ -0.87
HDAC9-223	ENST00000476135	COL25A1	Q9BXS0	654 aa	Predicted RBP	9.63	□□□□□ -0.87
HDAC9-223	ENST00000476135	PANK3	Q9H999	370 aa		9.63	□□□□□ -0.87
HDAC9-223	ENST00000476135	EFCC1	Q9HA90	598 aa		9.63	□□□□□ -0.87
HDAC9-223	ENST00000476135	LAMB1	P07942	1786 aa		9.63	□□□□□ -0.87
HDAC9-223	ENST00000476135	MANSC4	A6NHS7	340 aa	Predicted RBP	9.62	□□□□□ -0.87
HDAC9-223	ENST00000476135	ECE2	O60344	883 aa		9.62	□□□□□ -0.87
HDAC9-223	ENST00000476135	DIAPH1	O60610	1272 aa	Known RBP	9.62	□□□□□ -0.87
HDAC9-223	ENST00000476135	GRAP	Q13588	217 aa		9.62	□□□□□ -0.87
HDAC9-223	ENST00000476135	TTLL12	Q14166	644 aa	Predicted RBP	9.62	□□□□□ -0.87
HDAC9-223	ENST00000476135	SLC4A8	Q2Y0W8	1093 aa		9.62	□□□□□ -0.87
HDAC9-223	ENST00000476135	SPRYD7	Q5W111	196 aa		9.62	□□□□□ -0.87
HDAC9-223	ENST00000476135	DDX46	Q7L014	1031 aa	Known RBP	9.62	□□□□□ -0.87
HDAC9-223	ENST00000476135	GRAPL	Q8TC17	118 aa	Predicted RBP	9.62	□□□□□ -0.87
HDAC9-223	ENST00000476135	CD99L2	Q8TCZ2	262 aa		9.62	□□□□□ -0.87
HDAC9-223	ENST00000476135	KCNQ5	Q9NR82	932 aa		9.62	□□□□□ -0.87
HDAC9-223	ENST00000476135	NF2	P35240	595 aa		9.61	□□□□□ -0.87
HDAC9-223	ENST00000476135	GIGYF2	Q6Y7W6	1299 aa	Known RBP	9.61	□□□□□ -0.87
HDAC9-223	ENST00000476135	TTLL7	Q6ZT98	887 aa		9.61	□□□□□ -0.87
HDAC9-223	ENST00000476135	DPF3	Q92784	378 aa		9.61	□□□□□ -0.87
HDAC9-223	ENST00000476135	TATDN2	Q93075	761 aa		9.61	□□□□□ -0.87
HDAC9-223	ENST00000476135	PTPN12	Q05209	780 aa	Known RBP	9.6	□□□□□ -0.87
HDAC9-223	ENST00000476135	SLC9C1	Q4G0N8	1177 aa		9.6	□□□□□ -0.87
HDAC9-223	ENST00000476135	ARMC9	Q7Z3E5	817 aa		9.6	□□□□□ -0.87
HDAC9-223	ENST00000476135	NGEF	Q8N5V2	710 aa		9.6	□□□□□ -0.87
HDAC9-223	ENST00000476135	AGBL3	Q8NEM8	1001 aa		9.6	□□□□□ -0.87
HDAC9-223	ENST00000476135	EYA3	Q99504	573 aa		9.6	□□□□□ -0.87
HDAC9-223	ENST00000476135	POLR3GL	Q9BT43	218 aa		9.6	□□□□□ -0.87
HDAC9-223	ENST00000476135	UTP14A	Q9BVJ6	771 aa	Known RBP	9.6	□□□□□ -0.87
HDAC9-223	ENST00000476135	PNMA3	Q9UL41	463 aa		9.6	□□□□□ -0.87
HDAC9-223	ENST00000476135	STXBP5L	Q9Y2K9	1186 aa		9.6	□□□□□ -0.87
HDAC9-223	ENST00000476135	SCN9A	Q15858	1988 aa		9.6	□□□□□ -0.87
HDAC9-223	ENST00000476135	TAF1	P21675	1872 aa		9.59	□□□□□ -0.87
HDAC9-223	ENST00000476135	PSME4	Q14997	1843 aa		9.59	□□□□□ -0.87
HDAC9-223	ENST00000476135	C6orf229	H3BNL8	230 aa		9.59	□□□□□ -0.87
HDAC9-223	ENST00000476135	SOX1	O00570	391 aa	Predicted RBP	9.59	□□□□□ -0.87
HDAC9-223	ENST00000476135	SP3	Q02447	781 aa		9.59	□□□□□ -0.87
HDAC9-223	ENST00000476135	KCNC4	Q03721	635 aa		9.59	□□□□□ -0.87
HDAC9-223	ENST00000476135	ARHGEF6	Q15052	776 aa		9.59	□□□□□ -0.87
HDAC9-223	ENST00000476135	LDLRAD1	Q5T700	205 aa		9.59	□□□□□ -0.87
HDAC9-223	ENST00000476135	ZBTB3	Q9H5J0	574 aa		9.59	□□□□□ -0.87
HDAC9-223	ENST00000476135	MYOZ2	Q9NPC6	264 aa		9.59	□□□□□ -0.87
HDAC9-223	ENST00000476135	WTIP	A6NIX2	430 aa	Predicted RBP	9.58	□□□□□ -0.88
HDAC9-223	ENST00000476135	IGF2BP3	O00425	579 aa	Known RBP eCLIP	9.58	□□□□□ -0.88
HDAC9-223	ENST00000476135	ZBTB48	P10074	688 aa	Predicted RBP	9.58	□□□□□ -0.88
HDAC9-223	ENST00000476135	PRAMEF18	Q5VWM3	479 aa		9.58	□□□□□ -0.88
HDAC9-223	ENST00000476135	OTUD7B	Q6GQQ9	843 aa		9.58	□□□□□ -0.88
HDAC9-223	ENST00000476135	RSBN1L	Q6PCB5	846 aa	Predicted RBP	9.58	□□□□□ -0.88
HDAC9-223	ENST00000476135	HTATIP2	Q9BUP3	242 aa		9.58	□□□□□ -0.88
HDAC9-223	ENST00000476135	NPDC1	Q9NQX5	325 aa	Predicted RBP	9.58	□□□□□ -0.88
HDAC9-223	ENST00000476135	POLL	Q9UGP5	575 aa		9.58	□□□□□ -0.88
HDAC9-223	ENST00000476135	NSFL1C	Q9UNZ2	370 aa	Known RBP	9.58	□□□□□ -0.88
HDAC9-223	ENST00000476135	NR2E3	Q9Y5X4	410 aa		9.58	□□□□□ -0.88
HDAC9-223	ENST00000476135	ZNF646	O15015	1829 aa	Predicted RBP	9.58	□□□□□ -0.88
HDAC9-223	ENST00000476135	USP17L8	P0C7I0	530 aa		9.57	□□□□□ -0.88
HDAC9-223	ENST00000476135	PPP4C	P60510	307 aa		9.57	□□□□□ -0.88
HDAC9-223	ENST00000476135	CAP1	Q01518	475 aa		9.57	□□□□□ -0.88
HDAC9-223	ENST00000476135	CRHR2	Q13324	411 aa		9.57	□□□□□ -0.88
HDAC9-223	ENST00000476135	NUDT18	Q6ZVK8	323 aa		9.57	□□□□□ -0.88
HDAC9-223	ENST00000476135	KCNV2	Q8TDN2	545 aa		9.57	□□□□□ -0.88
HDAC9-223	ENST00000476135	GML	Q99445	158 aa		9.57	□□□□□ -0.88
HDAC9-223	ENST00000476135	PRDM6	Q9NQX0	595 aa		9.57	□□□□□ -0.88
HDAC9-223	ENST00000476135	RRP7A	Q9Y3A4	280 aa	Known RBP	9.57	□□□□□ -0.88

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