RNA–Protein interactions for RNA: ENST00000476126.1

SP140-209, Transcript of SP140 nuclear body protein, humanhuman

TSL 3

Gene SP140, Length 463 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-209ENST00000476126 GBA2Q9HCG7 927 aaPredicted RBP8.68□□□□□ -1.02
SP140-209ENST00000476126 JAG2Q9Y219 1238 aa8.68□□□□□ -1.02
SP140-209ENST00000476126 ASTN2O75129 1339 aaPredicted RBP8.68□□□□□ -1.02
SP140-209ENST00000476126 LAMB1P07942 1786 aa8.68□□□□□ -1.02
SP140-209ENST00000476126 GYG1P46976 350 aa8.67□□□□□ -1.02
SP140-209ENST00000476126 MAP2K1Q02750 393 aaPredicted RBP8.67□□□□□ -1.02
SP140-209ENST00000476126 UBE4AQ14139 1066 aa8.67□□□□□ -1.02
SP140-209ENST00000476126 LRRC24Q50LG9 513 aa8.67□□□□□ -1.02
SP140-209ENST00000476126 DLK2Q6UY11 383 aa8.67□□□□□ -1.02
SP140-209ENST00000476126 C15orf52Q6ZUT6 534 aaKnown RBP8.67□□□□□ -1.02
SP140-209ENST00000476126 SAPCD2Q86UD0 394 aa8.67□□□□□ -1.02
SP140-209ENST00000476126 KLHDC4Q8TBB5 520 aa8.67□□□□□ -1.02
SP140-209ENST00000476126 DOCK2Q92608 1830 aa8.67□□□□□ -1.02
SP140-209ENST00000476126 CDCA5Q96FF9 252 aa8.67□□□□□ -1.02
SP140-209ENST00000476126 GMLQ99445 158 aa8.67□□□□□ -1.02
SP140-209ENST00000476126 PITPNM2Q9BZ72 1349 aa8.67□□□□□ -1.02
SP140-209ENST00000476126 HDAC5Q9UQL6 1122 aa8.67□□□□□ -1.02
SP140-209ENST00000476126 COL1A1P02452 1464 aaPredicted RBP8.66□□□□□ -1.02
SP140-209ENST00000476126 IRS2Q9Y4H2 1338 aa8.66□□□□□ -1.02
SP140-209ENST00000476126 WNT10BO00744 389 aa8.66□□□□□ -1.02
SP140-209ENST00000476126 FOXN1O15353 648 aa8.66□□□□□ -1.02
SP140-209ENST00000476126 IPO8O15397 1037 aaKnown RBP8.66□□□□□ -1.02
SP140-209ENST00000476126 MYO1BO43795 1136 aa8.66□□□□□ -1.02
SP140-209ENST00000476126 IL1R1P14778 569 aa8.66□□□□□ -1.02
SP140-209ENST00000476126 HIBADHP31937 336 aaKnown RBP8.66□□□□□ -1.02
SP140-209ENST00000476126 NF2P35240 595 aa8.66□□□□□ -1.02
SP140-209ENST00000476126 MMP14P50281 582 aa8.66□□□□□ -1.02
SP140-209ENST00000476126 RBM5P52756 815 aaKnown RBP eCLIP8.66□□□□□ -1.02
SP140-209ENST00000476126 TTLL12Q14166 644 aaPredicted RBP8.66□□□□□ -1.02
SP140-209ENST00000476126 DLGAP5Q15398 846 aa8.66□□□□□ -1.02
SP140-209ENST00000476126 NBPF9Q3BBW0 867 aa8.66□□□□□ -1.02
SP140-209ENST00000476126 CAVIN4Q5BKX8 364 aa8.66□□□□□ -1.02
SP140-209ENST00000476126 APOBEC3FQ8IUX4 373 aaKnown RBP8.66□□□□□ -1.02
SP140-209ENST00000476126 SIL1Q9H173 461 aa8.66□□□□□ -1.02
SP140-209ENST00000476126 SCAF8Q9UPN6 1271 aaKnown RBP8.66□□□□□ -1.02
SP140-209ENST00000476126 LRRFIP2Q9Y608 721 aaKnown RBP8.66□□□□□ -1.02
SP140-209ENST00000476126 MYO5AQ9Y4I1 1855 aaKnown RBP8.66□□□□□ -1.02
SP140-209ENST00000476126 AOC2O75106 756 aa8.65□□□□□ -1.02
SP140-209ENST00000476126 PDE8BO95263 885 aa8.65□□□□□ -1.02
SP140-209ENST00000476126 IFIT1P09914 478 aaKnown RBP8.65□□□□□ -1.02
SP140-209ENST00000476126 CTCFP49711 727 aaPredicted RBP8.65□□□□□ -1.02
SP140-209ENST00000476126 BRPF1P55201 1214 aaPredicted RBP8.65□□□□□ -1.02
SP140-209ENST00000476126 CHAF1AQ13111 956 aaPredicted RBP8.65□□□□□ -1.02
SP140-209ENST00000476126 PUM3Q15397 648 aaKnown RBP8.65□□□□□ -1.02
SP140-209ENST00000476126 MFSD14BQ5SR56 506 aa8.65□□□□□ -1.02
SP140-209ENST00000476126 COL13A1Q5TAT6 717 aaPredicted RBP8.65□□□□□ -1.02
SP140-209ENST00000476126 TNS4Q8IZW8 715 aa8.65□□□□□ -1.02
SP140-209ENST00000476126 CLUAP1Q96AJ1 413 aa8.65□□□□□ -1.02
SP140-209ENST00000476126 HHIPL1Q96JK4 782 aa8.65□□□□□ -1.02
SP140-209ENST00000476126 MEIS3Q99687 375 aa8.65□□□□□ -1.02
SP140-209ENST00000476126 IQSEC3Q9UPP2 1182 aaPredicted RBP8.65□□□□□ -1.02
SP140-209ENST00000476126 RIPOR2Q9Y4F9 1068 aa8.65□□□□□ -1.02
SP140-209ENST00000476126 MAST2Q6P0Q8 1798 aa8.65□□□□□ -1.02
SP140-209ENST00000476126 ZBED9Q6R2W3 1325 aa8.64□□□□□ -1.03
SP140-209ENST00000476126 EYA2O00167 538 aa8.64□□□□□ -1.03
SP140-209ENST00000476126 BCAR3O75815 825 aa8.64□□□□□ -1.03
SP140-209ENST00000476126 GNAI3P08754 354 aa8.64□□□□□ -1.03
SP140-209ENST00000476126 SLC5A1P13866 664 aa8.64□□□□□ -1.03
SP140-209ENST00000476126 ZNF157P51786 506 aaPredicted RBP8.64□□□□□ -1.03
SP140-209ENST00000476126 FKBP1AP62942 108 aaKnown RBP8.64□□□□□ -1.03
SP140-209ENST00000476126 NOGQ13253 232 aa8.64□□□□□ -1.03
SP140-209ENST00000476126 CFAP100Q494V2 611 aa8.64□□□□□ -1.03
SP140-209ENST00000476126 IFFO2Q5TF58 517 aa8.64□□□□□ -1.03
SP140-209ENST00000476126 ZKSCAN2Q63HK3 967 aa8.64□□□□□ -1.03
SP140-209ENST00000476126 RGMBQ6NW40 437 aa8.64□□□□□ -1.03
SP140-209ENST00000476126 ATF7IPQ6VMQ6 1270 aa8.64□□□□□ -1.03
SP140-209ENST00000476126 FTSJ3Q8IY81 847 aaKnown RBP8.64□□□□□ -1.03
SP140-209ENST00000476126 CERS5Q8N5B7 392 aa8.64□□□□□ -1.03
SP140-209ENST00000476126 ARHGAP45Q92619 1136 aa8.64□□□□□ -1.03
SP140-209ENST00000476126 VEZTQ9HBM0 779 aa8.64□□□□□ -1.03
SP140-209ENST00000476126 TTF2Q9UNY4 1162 aaKnown RBP8.64□□□□□ -1.03
SP140-209ENST00000476126 FAM205AQ6ZU69 1335 aa8.63□□□□□ -1.03
SP140-209ENST00000476126 CLRN2A0PK11 232 aa8.63□□□□□ -1.03
SP140-209ENST00000476126 TRIM27P14373 513 aa8.63□□□□□ -1.03
SP140-209ENST00000476126 MAP2K2P36507 400 aa8.63□□□□□ -1.03
SP140-209ENST00000476126 LBX1P52954 281 aa8.63□□□□□ -1.03
SP140-209ENST00000476126 PTPN12Q05209 780 aaKnown RBP8.63□□□□□ -1.03
SP140-209ENST00000476126 PRAMEF18Q5VWM3 479 aa8.63□□□□□ -1.03
SP140-209ENST00000476126 INTS3Q68E01 1043 aaKnown RBP8.63□□□□□ -1.03
SP140-209ENST00000476126 VGLL2Q8N8G2 317 aa8.63□□□□□ -1.03
SP140-209ENST00000476126 TDRD7Q8NHU6 1098 aaKnown RBP8.63□□□□□ -1.03
SP140-209ENST00000476126 FAM84BQ96KN1 310 aaPredicted RBP8.63□□□□□ -1.03
SP140-209ENST00000476126 WBP1LQ9NX94 342 aa8.63□□□□□ -1.03
SP140-209ENST00000476126 CDK5RAP2Q96SN8 1893 aa8.63□□□□□ -1.03
SP140-209ENST00000476126 ATAD5Q96QE3 1844 aa8.62□□□□□ -1.03
SP140-209ENST00000476126 SRGAP3O43295 1099 aa8.62□□□□□ -1.03
SP140-209ENST00000476126 CAPN15O75808 1086 aa8.62□□□□□ -1.03
SP140-209ENST00000476126 RFX5P48382 616 aaPredicted RBP8.62□□□□□ -1.03
SP140-209ENST00000476126 FKBP1BP68106 108 aa8.62□□□□□ -1.03
SP140-209ENST00000476126 PRKG1Q13976 671 aa8.62□□□□□ -1.03
SP140-209ENST00000476126 ATP2B3Q16720 1220 aa8.62□□□□□ -1.03
SP140-209ENST00000476126 TBC1D22AQ8WUA7 517 aa8.62□□□□□ -1.03
SP140-209ENST00000476126 LPIN2Q92539 896 aa8.62□□□□□ -1.03
SP140-209ENST00000476126 CCDC102AQ96A19 550 aa8.62□□□□□ -1.03
SP140-209ENST00000476126 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.62□□□□□ -1.03
SP140-209ENST00000476126 CEP126Q9P2H0 1117 aa8.62□□□□□ -1.03
SP140-209ENST00000476126 TSKSQ9UJT2 592 aa8.62□□□□□ -1.03
SP140-209ENST00000476126 FBXO3Q9UK99 471 aa8.62□□□□□ -1.03
SP140-209ENST00000476126 PA2G4Q9UQ80 394 aaKnown RBP8.62□□□□□ -1.03
SP140-209ENST00000476126 TNNQ9UQP3 1299 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms