RNA–Protein interactions for RNA: ENST00000475540.1

SMC5-203, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-203ENST00000475540 CARD10Q9BWT7 1032 aa11.54□□□□□ -0.56
SMC5-203ENST00000475540 OSGEPQ9NPF4 335 aa11.54□□□□□ -0.56
SMC5-203ENST00000475540 GRIA4P48058 902 aa11.53□□□□□ -0.56
SMC5-203ENST00000475540 ADGRE1Q14246 886 aa11.53□□□□□ -0.56
SMC5-203ENST00000475540 SUZ12Q15022 739 aaKnown RBP11.53□□□□□ -0.56
SMC5-203ENST00000475540 VN1R5Q7Z5H4 357 aa11.53□□□□□ -0.56
SMC5-203ENST00000475540 MRPL18Q9H0U6 180 aaKnown RBP11.53□□□□□ -0.56
SMC5-203ENST00000475540 TRAK1Q9UPV9 953 aa11.53□□□□□ -0.56
SMC5-203ENST00000475540 ATP2B2Q01814 1243 aa11.52□□□□□ -0.57
SMC5-203ENST00000475540 MBTPS1Q14703 1052 aa11.52□□□□□ -0.57
SMC5-203ENST00000475540 SPRED3Q2MJR0 410 aa11.52□□□□□ -0.57
SMC5-203ENST00000475540 KLHDC7BQ96G42 594 aa11.52□□□□□ -0.57
SMC5-203ENST00000475540 SOX1O00570 391 aaPredicted RBP11.51□□□□□ -0.57
SMC5-203ENST00000475540 PROCP04070 461 aa11.51□□□□□ -0.57
SMC5-203ENST00000475540 C19orf57Q0VDD7 668 aa11.51□□□□□ -0.57
SMC5-203ENST00000475540 ALG1LQ6GMV1 187 aa11.51□□□□□ -0.57
SMC5-203ENST00000475540 ANKRD33BA6NCL7 494 aa11.5□□□□□ -0.57
SMC5-203ENST00000475540 CCDC27Q2M243 656 aa11.5□□□□□ -0.57
SMC5-203ENST00000475540 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.5□□□□□ -0.57
SMC5-203ENST00000475540 TXNRD3Q86VQ6 643 aa11.5□□□□□ -0.57
SMC5-203ENST00000475540 FBF1Q8TES7 1133 aa11.5□□□□□ -0.57
SMC5-203ENST00000475540 CLEC4MQ9H2X3 399 aaPredicted RBP11.5□□□□□ -0.57
SMC5-203ENST00000475540 GRM2Q14416 872 aa11.49□□□□□ -0.57
SMC5-203ENST00000475540 TMEM130Q8N3G9 435 aa11.49□□□□□ -0.57
SMC5-203ENST00000475540 WFDC12Q8WWY7 111 aa11.49□□□□□ -0.57
SMC5-203ENST00000475540 TMEM238LA0A1B0GVL6 79 aa11.48□□□□□ -0.57
SMC5-203ENST00000475540 EIF4EBP3O60516 100 aaPredicted RBP11.48□□□□□ -0.57
SMC5-203ENST00000475540 P4HBP07237 508 aaKnown RBP11.48□□□□□ -0.57
SMC5-203ENST00000475540 ESRRAP11474 423 aaPredicted RBP11.48□□□□□ -0.57
SMC5-203ENST00000475540 FOXD4L6Q3SYB3 417 aaPredicted RBP11.48□□□□□ -0.57
SMC5-203ENST00000475540 PRPF40BQ6NWY9 871 aaKnown RBP11.48□□□□□ -0.57
SMC5-203ENST00000475540 PI16Q6UXB8 463 aa11.48□□□□□ -0.57
SMC5-203ENST00000475540 FOXD4L3Q6VB84 417 aaPredicted RBP11.48□□□□□ -0.57
SMC5-203ENST00000475540 TM4SF5O14894 197 aa11.47□□□□□ -0.57
SMC5-203ENST00000475540 ITPKAP23677 461 aa11.47□□□□□ -0.57
SMC5-203ENST00000475540 IREB2P48200 963 aaKnown RBP11.47□□□□□ -0.57
SMC5-203ENST00000475540 PTPN12Q05209 780 aaKnown RBP11.47□□□□□ -0.57
SMC5-203ENST00000475540 PCDH1Q08174 1060 aa11.47□□□□□ -0.57
SMC5-203ENST00000475540 COL19A1Q14993 1142 aa11.47□□□□□ -0.57
SMC5-203ENST00000475540 DUOXA2Q1HG44 320 aa11.47□□□□□ -0.57
SMC5-203ENST00000475540 BCO2Q9BYV7 579 aa11.47□□□□□ -0.57
SMC5-203ENST00000475540 SOX17Q9H6I2 414 aaPredicted RBP11.47□□□□□ -0.57
SMC5-203ENST00000475540 AKTIPQ9H8T0 292 aa11.47□□□□□ -0.57
SMC5-203ENST00000475540 ABCB6Q9NP58 842 aa11.47□□□□□ -0.57
SMC5-203ENST00000475540 KCNK4Q9NYG8 393 aa11.47□□□□□ -0.57
SMC5-203ENST00000475540 WWC3Q9ULE0 1092 aa11.47□□□□□ -0.57
SMC5-203ENST00000475540 DDX3YO15523 660 aaKnown RBP11.46□□□□□ -0.57
SMC5-203ENST00000475540 LDHBP07195 334 aaKnown RBP11.46□□□□□ -0.57
SMC5-203ENST00000475540 HGSNATQ68CP4 663 aa11.46□□□□□ -0.57
SMC5-203ENST00000475540 ZFYVE1Q9HBF4 777 aa11.46□□□□□ -0.57
SMC5-203ENST00000475540 F8W735 103 aaPredicted RBP11.45□□□□□ -0.58
SMC5-203ENST00000475540 NLRP12P59046 1061 aa11.45□□□□□ -0.58
SMC5-203ENST00000475540 FGD1P98174 961 aa11.45□□□□□ -0.58
SMC5-203ENST00000475540 GLIS3Q8NEA6 775 aa11.45□□□□□ -0.58
SMC5-203ENST00000475540 SETDB2Q96T68 719 aa11.45□□□□□ -0.58
SMC5-203ENST00000475540 ALX3O95076 343 aa11.44□□□□□ -0.58
SMC5-203ENST00000475540 NOS3P29474 1203 aa11.44□□□□□ -0.58
SMC5-203ENST00000475540 FCGRTP55899 365 aa11.44□□□□□ -0.58
SMC5-203ENST00000475540 GSTM4Q03013 218 aa11.44□□□□□ -0.58
SMC5-203ENST00000475540 DOC2BQ14184 412 aa11.44□□□□□ -0.58
SMC5-203ENST00000475540 ZNF423Q2M1K9 1284 aa11.44□□□□□ -0.58
SMC5-203ENST00000475540 EAPPQ56P03 285 aaPredicted RBP11.44□□□□□ -0.58
SMC5-203ENST00000475540 NXPE4Q6UWF7 544 aa11.44□□□□□ -0.58
SMC5-203ENST00000475540 DTHD1Q6ZMT9 781 aa11.44□□□□□ -0.58
SMC5-203ENST00000475540 ACAD11Q709F0 780 aa11.44□□□□□ -0.58
SMC5-203ENST00000475540 DDX54Q8TDD1 881 aaKnown RBP11.44□□□□□ -0.58
SMC5-203ENST00000475540 ZNF576Q9H609 170 aa11.44□□□□□ -0.58
SMC5-203ENST00000475540 GIPC1O14908 333 aa11.43□□□□□ -0.58
SMC5-203ENST00000475540 ADAM11O75078 769 aa11.43□□□□□ -0.58
SMC5-203ENST00000475540 DNAJC14Q6Y2X3 702 aaPredicted RBP11.43□□□□□ -0.58
SMC5-203ENST00000475540 ZC3HAV1Q7Z2W4 902 aaKnown RBP11.43□□□□□ -0.58
SMC5-203ENST00000475540 FOXD4L4Q8WXT5 416 aaPredicted RBP11.43□□□□□ -0.58
SMC5-203ENST00000475540 SPG7Q9UQ90 795 aa11.43□□□□□ -0.58
SMC5-203ENST00000475540 WISP1O95388 367 aa11.42□□□□□ -0.58
SMC5-203ENST00000475540 XRCC5P13010 732 aaKnown RBP11.42□□□□□ -0.58
SMC5-203ENST00000475540 ERCC3P19447 782 aa11.42□□□□□ -0.58
SMC5-203ENST00000475540 RPS26P11Q5JNZ5 115 aaPredicted RBP11.42□□□□□ -0.58
SMC5-203ENST00000475540 AGGF1Q8N302 714 aaeCLIP11.41□□□□□ -0.58
SMC5-203ENST00000475540 SRCIN1Q9C0H9 1055 aa11.41□□□□□ -0.58
SMC5-203ENST00000475540 B3GALT4O96024 378 aa11.4□□□□□ -0.58
SMC5-203ENST00000475540 KIAA1211Q6ZU35 1233 aa11.4□□□□□ -0.58
SMC5-203ENST00000475540 UBASH3BQ8TF42 649 aa11.4□□□□□ -0.58
SMC5-203ENST00000475540 FRMD6Q96NE9 622 aa11.4□□□□□ -0.58
SMC5-203ENST00000475540 TPSG1Q9NRR2 321 aa11.4□□□□□ -0.58
SMC5-203ENST00000475540 PRPF40AO75400 957 aaKnown RBP11.39□□□□□ -0.59
SMC5-203ENST00000475540 CYP11A1P05108 521 aa11.39□□□□□ -0.59
SMC5-203ENST00000475540 GLB1P16278 677 aa11.39□□□□□ -0.59
SMC5-203ENST00000475540 NPAS4Q8IUM7 802 aa11.39□□□□□ -0.59
SMC5-203ENST00000475540 TP53INP1Q96A56 240 aa11.39□□□□□ -0.59
SMC5-203ENST00000475540 USP26Q9BXU7 913 aa11.39□□□□□ -0.59
SMC5-203ENST00000475540 AKAP2Q9Y2D5 859 aa11.39□□□□□ -0.59
SMC5-203ENST00000475540 TMCO4Q5TGY1 634 aa11.38□□□□□ -0.59
SMC5-203ENST00000475540 RUSC1Q9BVN2 902 aa11.38□□□□□ -0.59
SMC5-203ENST00000475540 OSBPL7Q9BZF2 842 aa11.38□□□□□ -0.59
SMC5-203ENST00000475540 RNF208Q9H0X6 261 aa11.38□□□□□ -0.59
SMC5-203ENST00000475540 FURINP09958 794 aa11.37□□□□□ -0.59
SMC5-203ENST00000475540 GSTT1P30711 240 aa11.37□□□□□ -0.59
SMC5-203ENST00000475540 MEGF10Q96KG7 1140 aa11.37□□□□□ -0.59
SMC5-203ENST00000475540 CEP41Q9BYV8 373 aa11.37□□□□□ -0.59
SMC5-203ENST00000475540 ZNF157P51786 506 aaPredicted RBP11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms