RNA–Protein interactions for RNA: ENST00000475411.5

CBWD1-212, Transcript of COBW domain containing 1, humanhuman

TSL 2

Gene CBWD1, Length 4,534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-212ENST00000475411 RAB34Q9BZG1 259 aa6.53□□□□□ -1.36
CBWD1-212ENST00000475411 HMG20BQ9P0W2 317 aa6.53□□□□□ -1.36
CBWD1-212ENST00000475411 MED1Q15648 1581 aaPredicted RBP6.53□□□□□ -1.36
CBWD1-212ENST00000475411 KNDC1Q76NI1 1749 aa6.53□□□□□ -1.36
CBWD1-212ENST00000475411 USP42Q9H9J4 1324 aaKnown RBP6.53□□□□□ -1.36
CBWD1-212ENST00000475411 A0A1B0GUL7 405 aa6.53□□□□□ -1.36
CBWD1-212ENST00000475411 IFIT3O14879 490 aaKnown RBP6.53□□□□□ -1.36
CBWD1-212ENST00000475411 USP17L8P0C7I0 530 aa6.53□□□□□ -1.36
CBWD1-212ENST00000475411 KRT24Q2M2I5 525 aa6.53□□□□□ -1.36
CBWD1-212ENST00000475411 GOPCQ9HD26 462 aa6.53□□□□□ -1.36
CBWD1-212ENST00000475411 STX8Q9UNK0 236 aa6.53□□□□□ -1.36
CBWD1-212ENST00000475411 TRIM35Q9UPQ4 493 aa6.53□□□□□ -1.36
CBWD1-212ENST00000475411 CDHR2Q9BYE9 1310 aa6.53□□□□□ -1.36
CBWD1-212ENST00000475411 SOCS7O14512 581 aa6.53□□□□□ -1.36
CBWD1-212ENST00000475411 ZBED4O75132 1171 aa6.53□□□□□ -1.36
CBWD1-212ENST00000475411 MAP4K4O95819 1239 aaPredicted RBP6.53□□□□□ -1.36
CBWD1-212ENST00000475411 HOXD10P28358 340 aa6.53□□□□□ -1.36
CBWD1-212ENST00000475411 PLCB2Q00722 1185 aa6.53□□□□□ -1.36
CBWD1-212ENST00000475411 CHRNDQ07001 517 aa6.53□□□□□ -1.36
CBWD1-212ENST00000475411 TSPYL6Q8N831 410 aa6.53□□□□□ -1.36
CBWD1-212ENST00000475411 CEP89Q96ST8 783 aa6.53□□□□□ -1.36
CBWD1-212ENST00000475411 USP40Q9NVE5 1235 aa6.53□□□□□ -1.36
CBWD1-212ENST00000475411 SLC12A7Q9Y666 1083 aa6.53□□□□□ -1.36
CBWD1-212ENST00000475411 COL14A1Q05707 1796 aaKnown RBP6.53□□□□□ -1.36
CBWD1-212ENST00000475411 CALM1P0DP23 149 aa6.52□□□□□ -1.37
CBWD1-212ENST00000475411 CALM2P0DP24 149 aa6.52□□□□□ -1.37
CBWD1-212ENST00000475411 CALM3P0DP25 149 aa6.52□□□□□ -1.37
CBWD1-212ENST00000475411 RPS12P25398 132 aaKnown RBP6.52□□□□□ -1.37
CBWD1-212ENST00000475411 RBM10P98175 930 aaKnown RBP6.52□□□□□ -1.37
CBWD1-212ENST00000475411 TFCP2Q12800 502 aa6.52□□□□□ -1.37
CBWD1-212ENST00000475411 PRPF40BQ6NWY9 871 aaKnown RBP6.52□□□□□ -1.37
CBWD1-212ENST00000475411 KIAA0825Q8IV33 1275 aa6.52□□□□□ -1.37
CBWD1-212ENST00000475411 MAGEB6Q8N7X4 407 aa6.52□□□□□ -1.37
CBWD1-212ENST00000475411 NCOA7Q8NI08 942 aa6.52□□□□□ -1.37
CBWD1-212ENST00000475411 RTL9Q8NET4 1388 aa6.52□□□□□ -1.37
CBWD1-212ENST00000475411 RNF113AO15541 343 aaKnown RBP6.52□□□□□ -1.37
CBWD1-212ENST00000475411 IGSF3O75054 1194 aa6.52□□□□□ -1.37
CBWD1-212ENST00000475411 BAG4O95429 457 aaKnown RBP6.52□□□□□ -1.37
CBWD1-212ENST00000475411 PRKG1Q13976 671 aa6.52□□□□□ -1.37
CBWD1-212ENST00000475411 SLC10A4Q96EP9 437 aa6.52□□□□□ -1.37
CBWD1-212ENST00000475411 C22orf23Q9BZE7 217 aa6.52□□□□□ -1.37
CBWD1-212ENST00000475411 BMP2KQ9NSY1 1161 aaPredicted RBP6.52□□□□□ -1.37
CBWD1-212ENST00000475411 CIAO1O76071 339 aa6.52□□□□□ -1.37
CBWD1-212ENST00000475411 USP14P54578 494 aa6.52□□□□□ -1.37
CBWD1-212ENST00000475411 RABEP1Q15276 862 aa6.52□□□□□ -1.37
CBWD1-212ENST00000475411 TBC1D9BQ66K14 1250 aa6.52□□□□□ -1.37
CBWD1-212ENST00000475411 LINC00116Q8NCU8 138 aa6.52□□□□□ -1.37
CBWD1-212ENST00000475411 CCDC148Q8NFR7 591 aa6.52□□□□□ -1.37
CBWD1-212ENST00000475411 XAGE2Q96GT9 111 aa6.52□□□□□ -1.37
CBWD1-212ENST00000475411 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.52□□□□□ -1.37
CBWD1-212ENST00000475411 BSDC1Q9NW68 430 aaPredicted RBP6.52□□□□□ -1.37
CBWD1-212ENST00000475411 ZNRF3Q9ULT6 936 aa6.52□□□□□ -1.37
CBWD1-212ENST00000475411 ARHGEF28Q8N1W1 1705 aaKnown RBP6.52□□□□□ -1.37
CBWD1-212ENST00000475411 RAD17O75943 681 aa6.51□□□□□ -1.37
CBWD1-212ENST00000475411 ZNF396Q96N95 335 aaPredicted RBP6.51□□□□□ -1.37
CBWD1-212ENST00000475411 GPHNQ9NQX3 736 aaPredicted RBP6.51□□□□□ -1.37
CBWD1-212ENST00000475411 FMN2Q9NZ56 1722 aa6.51□□□□□ -1.37
CBWD1-212ENST00000475411 RAD50Q92878 1312 aa6.51□□□□□ -1.37
CBWD1-212ENST00000475411 DPEP1P16444 411 aa6.51□□□□□ -1.37
CBWD1-212ENST00000475411 CCDC184Q52MB2 194 aa6.51□□□□□ -1.37
CBWD1-212ENST00000475411 TEX35Q5T0J7 233 aa6.51□□□□□ -1.37
CBWD1-212ENST00000475411 SUCLG2Q96I99 432 aa6.51□□□□□ -1.37
CBWD1-212ENST00000475411 TSPYL1Q9H0U9 437 aa6.51□□□□□ -1.37
CBWD1-212ENST00000475411 BRD2P25440 801 aaKnown RBP6.51□□□□□ -1.37
CBWD1-212ENST00000475411 EIF5P55010 431 aaKnown RBP6.51□□□□□ -1.37
CBWD1-212ENST00000475411 TNNI3KQ59H18 835 aa6.51□□□□□ -1.37
CBWD1-212ENST00000475411 SUSD4Q5VX71 490 aa6.51□□□□□ -1.37
CBWD1-212ENST00000475411 SPATA5Q8NB90 893 aa6.51□□□□□ -1.37
CBWD1-212ENST00000475411 TANGO6Q9C0B7 1094 aa6.51□□□□□ -1.37
CBWD1-212ENST00000475411 DBNDD1Q9H9R9 158 aa6.51□□□□□ -1.37
CBWD1-212ENST00000475411 FPGT-TNNI3KV9GXZ4 949 aa6.51□□□□□ -1.37
CBWD1-212ENST00000475411 NRKQ7Z2Y5 1582 aa6.51□□□□□ -1.37
CBWD1-212ENST00000475411 AHDC1Q5TGY3 1603 aaPredicted RBP6.51□□□□□ -1.37
CBWD1-212ENST00000475411 VPS37CA5D8V6 355 aaPredicted RBP6.51□□□□□ -1.37
CBWD1-212ENST00000475411 TAF5LO75529 589 aa6.51□□□□□ -1.37
CBWD1-212ENST00000475411 GPS2Q13227 327 aa6.51□□□□□ -1.37
CBWD1-212ENST00000475411 TMEM266Q2M3C6 531 aa6.51□□□□□ -1.37
CBWD1-212ENST00000475411 UPF1Q92900 1129 aaKnown RBP eCLIP6.51□□□□□ -1.37
CBWD1-212ENST00000475411 GLT8D2Q9H1C3 349 aa6.51□□□□□ -1.37
CBWD1-212ENST00000475411 RGS12O14924 1447 aa6.5□□□□□ -1.37
CBWD1-212ENST00000475411 A0A0G2JLW4 131 aa6.5□□□□□ -1.37
CBWD1-212ENST00000475411 SPDYE4A6NLX3 237 aa6.5□□□□□ -1.37
CBWD1-212ENST00000475411 GOLGA8AA7E2F4 631 aa6.5□□□□□ -1.37
CBWD1-212ENST00000475411 GOLGA8BA8MQT2 603 aa6.5□□□□□ -1.37
CBWD1-212ENST00000475411 VEGFAP15692 232 aaPredicted RBP6.5□□□□□ -1.37
CBWD1-212ENST00000475411 CHMP4BP1P59074 171 aa6.5□□□□□ -1.37
CBWD1-212ENST00000475411 RAB3GAP1Q15042 981 aa6.5□□□□□ -1.37
CBWD1-212ENST00000475411 COL23A1Q86Y22 540 aaPredicted RBP6.5□□□□□ -1.37
CBWD1-212ENST00000475411 CEP131Q9UPN4 1083 aa6.5□□□□□ -1.37
CBWD1-212ENST00000475411 NOD1Q9Y239 953 aa6.5□□□□□ -1.37
CBWD1-212ENST00000475411 PXDNQ92626 1479 aa6.5□□□□□ -1.37
CBWD1-212ENST00000475411 WTAPQ15007 396 aa6.5□□□□□ -1.37
CBWD1-212ENST00000475411 MCMDC2Q4G0Z9 681 aa6.5□□□□□ -1.37
CBWD1-212ENST00000475411 TMEM67Q5HYA8 995 aa6.5□□□□□ -1.37
CBWD1-212ENST00000475411 PRR5LQ6MZQ0 368 aa6.5□□□□□ -1.37
CBWD1-212ENST00000475411 GADL1Q6ZQY3 521 aa6.5□□□□□ -1.37
CBWD1-212ENST00000475411 G2E3Q7L622 706 aa6.5□□□□□ -1.37
CBWD1-212ENST00000475411 DDX11Q96FC9 970 aa6.5□□□□□ -1.37
CBWD1-212ENST00000475411 DHX36Q9H2U1 1008 aaKnown RBP6.5□□□□□ -1.37
CBWD1-212ENST00000475411 ARPP21Q9UBL0 812 aaPredicted RBP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms