RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 PPP2R3BQ9Y5P8 575 aa18.24■□□□□ 0.51
ATG9A-220ENST00000475339 ZNF646O15015 1829 aaPredicted RBP18.23■□□□□ 0.51
ATG9A-220ENST00000475339 GJB1P08034 283 aa18.23■□□□□ 0.51
ATG9A-220ENST00000475339 KIF22Q14807 665 aa18.23■□□□□ 0.51
ATG9A-220ENST00000475339 DLGAP5Q15398 846 aa18.23■□□□□ 0.51
ATG9A-220ENST00000475339 GPR153Q6NV75 609 aa18.23■□□□□ 0.51
ATG9A-220ENST00000475339 TXNRD3Q86VQ6 643 aa18.23■□□□□ 0.51
ATG9A-220ENST00000475339 PLEKHF1Q96S99 279 aa18.23■□□□□ 0.51
ATG9A-220ENST00000475339 COA1Q9GZY4 146 aa18.23■□□□□ 0.51
ATG9A-220ENST00000475339 CLRN2A0PK11 232 aa18.22■□□□□ 0.51
ATG9A-220ENST00000475339 EVI5O60447 810 aa18.22■□□□□ 0.51
ATG9A-220ENST00000475339 CCL5P13501 91 aa18.22■□□□□ 0.51
ATG9A-220ENST00000475339 TRIM28Q13263 835 aaKnown RBP18.22■□□□□ 0.51
ATG9A-220ENST00000475339 KRT24Q2M2I5 525 aa18.22■□□□□ 0.51
ATG9A-220ENST00000475339 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.22■□□□□ 0.51
ATG9A-220ENST00000475339 ZBTB38Q8NAP3 1195 aaPredicted RBP18.22■□□□□ 0.51
ATG9A-220ENST00000475339 MTMR10Q9NXD2 777 aa18.22■□□□□ 0.51
ATG9A-220ENST00000475339 FARP2O94887 1054 aaPredicted RBP18.21■□□□□ 0.51
ATG9A-220ENST00000475339 GNRH1P01148 92 aa18.21■□□□□ 0.51
ATG9A-220ENST00000475339 JARID2Q92833 1246 aaPredicted RBP18.21■□□□□ 0.51
ATG9A-220ENST00000475339 RNF208Q9H0X6 261 aa18.21■□□□□ 0.51
ATG9A-220ENST00000475339 ZNF804BA4D1E1 1349 aa18.21■□□□□ 0.51
ATG9A-220ENST00000475339 TLR2O60603 784 aa18.2■□□□□ 0.5
ATG9A-220ENST00000475339 GTF2A2P52657 109 aa18.2■□□□□ 0.5
ATG9A-220ENST00000475339 PRMT2P55345 433 aa18.2■□□□□ 0.5
ATG9A-220ENST00000475339 GTF2IP78347 998 aa18.2■□□□□ 0.5
ATG9A-220ENST00000475339 PNNQ9H307 717 aaKnown RBP18.2■□□□□ 0.5
ATG9A-220ENST00000475339 VEZTQ9HBM0 779 aa18.2■□□□□ 0.5
ATG9A-220ENST00000475339 ANP32CO43423 234 aa18.19■□□□□ 0.5
ATG9A-220ENST00000475339 HSP90B1P14625 803 aaKnown RBP18.19■□□□□ 0.5
ATG9A-220ENST00000475339 CTGFP29279 349 aa18.19■□□□□ 0.5
ATG9A-220ENST00000475339 GRK4P32298 578 aa18.19■□□□□ 0.5
ATG9A-220ENST00000475339 CCT4P50991 539 aaKnown RBP18.19■□□□□ 0.5
ATG9A-220ENST00000475339 MINPP1Q9UNW1 487 aa18.19■□□□□ 0.5
ATG9A-220ENST00000475339 AOX1Q06278 1338 aa18.19■□□□□ 0.5
ATG9A-220ENST00000475339 MAPK8IP3Q9UPT6 1336 aa18.19■□□□□ 0.5
ATG9A-220ENST00000475339 PDE8AO60658 829 aa18.18■□□□□ 0.5
ATG9A-220ENST00000475339 KLRK1P26718 216 aa18.18■□□□□ 0.5
ATG9A-220ENST00000475339 RASA3Q14644 834 aa18.18■□□□□ 0.5
ATG9A-220ENST00000475339 WDR43Q15061 677 aaKnown RBP eCLIP18.18■□□□□ 0.5
ATG9A-220ENST00000475339 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.18■□□□□ 0.5
ATG9A-220ENST00000475339 MTMR14Q8NCE2 650 aa18.18■□□□□ 0.5
ATG9A-220ENST00000475339 U2AF1L4Q8WU68 220 aaKnown RBP18.18■□□□□ 0.5
ATG9A-220ENST00000475339 PRMT6Q96LA8 375 aaPredicted RBP18.18■□□□□ 0.5
ATG9A-220ENST00000475339 SRRDQ9UH36 339 aa18.18■□□□□ 0.5
ATG9A-220ENST00000475339 RIPOR2Q9Y4F9 1068 aa18.18■□□□□ 0.5
ATG9A-220ENST00000475339 MYO1BO43795 1136 aa18.17■□□□□ 0.5
ATG9A-220ENST00000475339 WDHD1O75717 1129 aaPredicted RBP18.17■□□□□ 0.5
ATG9A-220ENST00000475339 RAET1EQ8TD07 263 aa18.17■□□□□ 0.5
ATG9A-220ENST00000475339 BABAM1Q9NWV8 329 aa18.17■□□□□ 0.5
ATG9A-220ENST00000475339 BIN2Q9UBW5 565 aaPredicted RBP18.17■□□□□ 0.5
ATG9A-220ENST00000475339 SPDYE2BA6NHP3 402 aa18.16■□□□□ 0.5
ATG9A-220ENST00000475339 F8W031 263 aaPredicted RBP18.16■□□□□ 0.5
ATG9A-220ENST00000475339 SPDYE6P0CI01 402 aa18.16■□□□□ 0.5
ATG9A-220ENST00000475339 VGLL4Q14135 290 aa18.16■□□□□ 0.5
ATG9A-220ENST00000475339 CFAP100Q494V2 611 aa18.16■□□□□ 0.5
ATG9A-220ENST00000475339 CERS5Q8N5B7 392 aa18.16■□□□□ 0.5
ATG9A-220ENST00000475339 TRIM47Q96LD4 638 aa18.16■□□□□ 0.5
ATG9A-220ENST00000475339 GDF15Q99988 308 aa18.16■□□□□ 0.5
ATG9A-220ENST00000475339 PRDM6Q9NQX0 595 aa18.16■□□□□ 0.5
ATG9A-220ENST00000475339 BMP8BP34820 402 aa18.15■□□□□ 0.5
ATG9A-220ENST00000475339 PSMC4P43686 418 aa18.15■□□□□ 0.5
ATG9A-220ENST00000475339 HDGFL1Q5TGJ6 251 aa18.15■□□□□ 0.5
ATG9A-220ENST00000475339 CDC5LQ99459 802 aaKnown RBP18.15■□□□□ 0.5
ATG9A-220ENST00000475339 BSDC1Q9NW68 430 aaPredicted RBP18.15■□□□□ 0.5
ATG9A-220ENST00000475339 OTOFQ9HC10 1997 aa18.15■□□□□ 0.5
ATG9A-220ENST00000475339 BTBD19C9JJ37 291 aa18.14■□□□□ 0.49
ATG9A-220ENST00000475339 PCCAP05165 728 aaPredicted RBP18.14■□□□□ 0.49
ATG9A-220ENST00000475339 OSBPP22059 807 aa18.14■□□□□ 0.49
ATG9A-220ENST00000475339 CDAN1Q8IWY9 1227 aa18.14■□□□□ 0.49
ATG9A-220ENST00000475339 UNC93B1Q9H1C4 597 aa18.14■□□□□ 0.49
ATG9A-220ENST00000475339 SPTBN5Q9NRC6 3674 aaKnown RBP18.14■□□□□ 0.49
ATG9A-220ENST00000475339 SGPL1O95470 568 aa18.13■□□□□ 0.49
ATG9A-220ENST00000475339 HOXD10P28358 340 aa18.13■□□□□ 0.49
ATG9A-220ENST00000475339 BCAMP50895 628 aa18.13■□□□□ 0.49
ATG9A-220ENST00000475339 UBXN2AP68543 259 aa18.13■□□□□ 0.49
ATG9A-220ENST00000475339 LRIT3Q3SXY7 679 aa18.13■□□□□ 0.49
ATG9A-220ENST00000475339 RIC3Q7Z5B4 369 aa18.13■□□□□ 0.49
ATG9A-220ENST00000475339 DBF4Q9UBU7 674 aaPredicted RBP18.13■□□□□ 0.49
ATG9A-220ENST00000475339 CPA4Q9UI42 421 aa18.13■□□□□ 0.49
ATG9A-220ENST00000475339 LEMD3Q9Y2U8 911 aa18.13■□□□□ 0.49
ATG9A-220ENST00000475339 FMNL1O95466 1100 aaPredicted RBP18.12■□□□□ 0.49
ATG9A-220ENST00000475339 MAP3K9P80192 1104 aa18.12■□□□□ 0.49
ATG9A-220ENST00000475339 C17orf99Q6UX52 265 aa18.12■□□□□ 0.49
ATG9A-220ENST00000475339 MYD88Q99836 296 aa18.12■□□□□ 0.49
ATG9A-220ENST00000475339 MYPNQ86TC9 1320 aa18.12■□□□□ 0.49
ATG9A-220ENST00000475339 CETPP11597 493 aa18.11■□□□□ 0.49
ATG9A-220ENST00000475339 RIPK4P57078 832 aa18.11■□□□□ 0.49
ATG9A-220ENST00000475339 ZCCHC17Q9NP64 241 aaKnown RBP18.11■□□□□ 0.49
ATG9A-220ENST00000475339 HYPKQ9NX55 129 aa18.11■□□□□ 0.49
ATG9A-220ENST00000475339 CSADQ9Y600 493 aa18.11■□□□□ 0.49
ATG9A-220ENST00000475339 TTC28Q96AY4 2481 aa18.11■□□□□ 0.49
ATG9A-220ENST00000475339 TFRCP02786 760 aaKnown RBP18.1■□□□□ 0.49
ATG9A-220ENST00000475339 RBM5P52756 815 aaKnown RBP eCLIP18.1■□□□□ 0.49
ATG9A-220ENST00000475339 CTSWP56202 376 aa18.1■□□□□ 0.49
ATG9A-220ENST00000475339 CCDC191Q8NCU4 936 aa18.1■□□□□ 0.49
ATG9A-220ENST00000475339 HELBQ8NG08 1087 aaPredicted RBP18.1■□□□□ 0.49
ATG9A-220ENST00000475339 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.1■□□□□ 0.49
ATG9A-220ENST00000475339 GREM2Q9H772 168 aa18.1■□□□□ 0.49
ATG9A-220ENST00000475339 CD209Q9NNX6 404 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms