RNA–Protein interactions for RNA: ENST00000475255.5

SEMA4D-217, Transcript of semaphorin 4D, humanhuman

TSL 1 (best)

Gene SEMA4D, Length 3,053 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-217ENST00000475255 LLPHQ9BRT6 129 aaKnown RBP15.93■□□□□ 0.14
SEMA4D-217ENST00000475255 CHMP4AQ9BY43 222 aa15.93■□□□□ 0.14
SEMA4D-217ENST00000475255 COPRSQ9NQ92 184 aa15.93■□□□□ 0.14
SEMA4D-217ENST00000475255 DENND2AQ9ULE3 1009 aa15.93■□□□□ 0.14
SEMA4D-217ENST00000475255 PNMA6AP0CW24 399 aaPredicted RBP15.92■□□□□ 0.14
SEMA4D-217ENST00000475255 FANCCQ00597 558 aa15.92■□□□□ 0.14
SEMA4D-217ENST00000475255 FKBP4Q02790 459 aaKnown RBP eCLIP15.92■□□□□ 0.14
SEMA4D-217ENST00000475255 ZNF790Q6PG37 636 aa15.92■□□□□ 0.14
SEMA4D-217ENST00000475255 C8orf76Q96K31 380 aa15.92■□□□□ 0.14
SEMA4D-217ENST00000475255 METTL22Q9BUU2 404 aaPredicted RBP15.92■□□□□ 0.14
SEMA4D-217ENST00000475255 PAG1Q9NWQ8 432 aa15.92■□□□□ 0.14
SEMA4D-217ENST00000475255 NEDD4P46934 1319 aa15.92■□□□□ 0.14
SEMA4D-217ENST00000475255 SPTLC2O15270 562 aa15.92■□□□□ 0.14
SEMA4D-217ENST00000475255 H2AFXP16104 143 aaPredicted RBP15.92■□□□□ 0.14
SEMA4D-217ENST00000475255 PLA2G4AP47712 749 aa15.92■□□□□ 0.14
SEMA4D-217ENST00000475255 NCAPHQ15003 741 aa15.92■□□□□ 0.14
SEMA4D-217ENST00000475255 ADALQ6DHV7 355 aa15.92■□□□□ 0.14
SEMA4D-217ENST00000475255 NEK11Q8NG66 645 aa15.92■□□□□ 0.14
SEMA4D-217ENST00000475255 M0R2C6 588 aa15.91■□□□□ 0.14
SEMA4D-217ENST00000475255 ZC3H6P61129 1189 aaKnown RBP15.91■□□□□ 0.14
SEMA4D-217ENST00000475255 IRX5P78411 483 aaPredicted RBP15.91■□□□□ 0.14
SEMA4D-217ENST00000475255 ORC3Q9UBD5 711 aaPredicted RBP15.91■□□□□ 0.14
SEMA4D-217ENST00000475255 TULP1O00294 542 aaPredicted RBP15.91■□□□□ 0.14
SEMA4D-217ENST00000475255 GYS2P54840 703 aa15.91■□□□□ 0.14
SEMA4D-217ENST00000475255 UBXN4Q92575 508 aa15.91■□□□□ 0.14
SEMA4D-217ENST00000475255 CCDC34Q96HJ3 373 aa15.91■□□□□ 0.14
SEMA4D-217ENST00000475255 L2HGDHQ9H9P8 463 aa15.91■□□□□ 0.14
SEMA4D-217ENST00000475255 MROH7-TTC4A0A0A0MT08 1334 aa15.91■□□□□ 0.14
SEMA4D-217ENST00000475255 MAST3O60307 1309 aa15.91■□□□□ 0.14
SEMA4D-217ENST00000475255 KLF18A0A0U1RQI7 1052 aa15.91■□□□□ 0.14
SEMA4D-217ENST00000475255 WDHD1O75717 1129 aaPredicted RBP15.91■□□□□ 0.14
SEMA4D-217ENST00000475255 SERPINC1P01008 464 aa15.91■□□□□ 0.14
SEMA4D-217ENST00000475255 CFAP100Q494V2 611 aa15.91■□□□□ 0.14
SEMA4D-217ENST00000475255 KDM3BQ7LBC6 1761 aa15.9■□□□□ 0.14
SEMA4D-217ENST00000475255 GOLGA8BA8MQT2 603 aa15.9■□□□□ 0.14
SEMA4D-217ENST00000475255 GCP02774 474 aa15.9■□□□□ 0.14
SEMA4D-217ENST00000475255 PFKFB1P16118 471 aa15.9■□□□□ 0.14
SEMA4D-217ENST00000475255 BMS1Q14692 1282 aaKnown RBP15.9■□□□□ 0.14
SEMA4D-217ENST00000475255 WASHC4Q2M389 1173 aa15.9■□□□□ 0.14
SEMA4D-217ENST00000475255 LRRC24Q50LG9 513 aa15.9■□□□□ 0.14
SEMA4D-217ENST00000475255 SPECC1Q5M775 1068 aa15.9■□□□□ 0.14
SEMA4D-217ENST00000475255 MNS1Q8NEH6 495 aa15.9■□□□□ 0.14
SEMA4D-217ENST00000475255 ZSWIM4Q9H7M6 989 aa15.9■□□□□ 0.14
SEMA4D-217ENST00000475255 FAM53CQ9NYF3 392 aa15.9■□□□□ 0.14
SEMA4D-217ENST00000475255 RTEL1Q9NZ71 1219 aa15.9■□□□□ 0.14
SEMA4D-217ENST00000475255 SALL1Q9NSC2 1324 aa15.9■□□□□ 0.14
SEMA4D-217ENST00000475255 PNOCQ13519 176 aa15.9■□□□□ 0.14
SEMA4D-217ENST00000475255 GNL2Q13823 731 aaKnown RBP15.9■□□□□ 0.14
SEMA4D-217ENST00000475255 AMOTQ4VCS5 1084 aa15.9■□□□□ 0.14
SEMA4D-217ENST00000475255 CLIC6Q96NY7 704 aa15.9■□□□□ 0.14
SEMA4D-217ENST00000475255 CCDC93Q567U6 631 aa15.89■□□□□ 0.13
SEMA4D-217ENST00000475255 NKX2-3Q8TAU0 364 aa15.89■□□□□ 0.13
SEMA4D-217ENST00000475255 OSBP2Q969R2 916 aa15.89■□□□□ 0.13
SEMA4D-217ENST00000475255 MED1Q15648 1581 aaPredicted RBP15.89■□□□□ 0.13
SEMA4D-217ENST00000475255 UBE2Q2LH0YL09 131 aa15.89■□□□□ 0.13
SEMA4D-217ENST00000475255 UBASH3AP57075 661 aa15.89■□□□□ 0.13
SEMA4D-217ENST00000475255 ETF1P62495 437 aaKnown RBP15.89■□□□□ 0.13
SEMA4D-217ENST00000475255 MYSM1Q5VVJ2 828 aa15.89■□□□□ 0.13
SEMA4D-217ENST00000475255 PDILTQ8N807 584 aa15.89■□□□□ 0.13
SEMA4D-217ENST00000475255 CCDC150Q8NCX0 1101 aa15.89■□□□□ 0.13
SEMA4D-217ENST00000475255 ORAI2Q96SN7 254 aa15.89■□□□□ 0.13
SEMA4D-217ENST00000475255 CCDC66A2RUB6 948 aa15.88■□□□□ 0.13
SEMA4D-217ENST00000475255 HNRNPH2P55795 449 aaKnown RBP15.88■□□□□ 0.13
SEMA4D-217ENST00000475255 SYNE3Q6ZMZ3 975 aa15.88■□□□□ 0.13
SEMA4D-217ENST00000475255 PUS3Q9BZE2 481 aaKnown RBP15.88■□□□□ 0.13
SEMA4D-217ENST00000475255 HSD3B7Q9H2F3 369 aa15.88■□□□□ 0.13
SEMA4D-217ENST00000475255 MARF1Q9Y4F3 1742 aaKnown RBP15.88■□□□□ 0.13
SEMA4D-217ENST00000475255 LTN1O94822 1766 aa15.88■□□□□ 0.13
SEMA4D-217ENST00000475255 CPLX1O14810 134 aa15.88■□□□□ 0.13
SEMA4D-217ENST00000475255 HMGB1P09429 215 aaKnown RBP15.88■□□□□ 0.13
SEMA4D-217ENST00000475255 ST5P78524 1137 aa15.88■□□□□ 0.13
SEMA4D-217ENST00000475255 PI16Q6UXB8 463 aa15.88■□□□□ 0.13
SEMA4D-217ENST00000475255 NLRP12P59046 1061 aa15.88■□□□□ 0.13
SEMA4D-217ENST00000475255 TIGD1Q96MW7 591 aa15.88■□□□□ 0.13
SEMA4D-217ENST00000475255 IMPACTQ9P2X3 320 aa15.88■□□□□ 0.13
SEMA4D-217ENST00000475255 HEG1Q9ULI3 1381 aa15.88■□□□□ 0.13
SEMA4D-217ENST00000475255 FOXN1O15353 648 aa15.87■□□□□ 0.13
SEMA4D-217ENST00000475255 IFIT1P09914 478 aaKnown RBP15.87■□□□□ 0.13
SEMA4D-217ENST00000475255 TEX35Q5T0J7 233 aa15.87■□□□□ 0.13
SEMA4D-217ENST00000475255 TMCO3Q6UWJ1 677 aa15.87■□□□□ 0.13
SEMA4D-217ENST00000475255 NLRP2Q9NX02 1062 aa15.87■□□□□ 0.13
SEMA4D-217ENST00000475255 PALLDQ8WX93 1383 aa15.87■□□□□ 0.13
SEMA4D-217ENST00000475255 PRC1O43663 620 aa15.87■□□□□ 0.13
SEMA4D-217ENST00000475255 TRIM65Q6PJ69 517 aa15.87■□□□□ 0.13
SEMA4D-217ENST00000475255 FANCLQ9NW38 375 aa15.87■□□□□ 0.13
SEMA4D-217ENST00000475255 KIF2AO00139 706 aaPredicted RBP15.86■□□□□ 0.13
SEMA4D-217ENST00000475255 SASH3O75995 380 aa15.86■□□□□ 0.13
SEMA4D-217ENST00000475255 ZMYM1Q5SVZ6 1142 aa15.86■□□□□ 0.13
SEMA4D-217ENST00000475255 AXDND1Q5T1B0 1012 aaPredicted RBP15.86■□□□□ 0.13
SEMA4D-217ENST00000475255 WDR24Q96S15 920 aa15.86■□□□□ 0.13
SEMA4D-217ENST00000475255 DESI2Q9BSY9 194 aa15.86■□□□□ 0.13
SEMA4D-217ENST00000475255 PSDA5PKW4 1024 aaPredicted RBP15.86■□□□□ 0.13
SEMA4D-217ENST00000475255 EVCP57679 992 aa15.86■□□□□ 0.13
SEMA4D-217ENST00000475255 ANO1Q5XXA6 986 aa15.86■□□□□ 0.13
SEMA4D-217ENST00000475255 FBXO18Q8NFZ0 1043 aa15.86■□□□□ 0.13
SEMA4D-217ENST00000475255 NCAPD2Q15021 1401 aa15.86■□□□□ 0.13
SEMA4D-217ENST00000475255 SH3TC1Q8TE82 1336 aa15.86■□□□□ 0.13
SEMA4D-217ENST00000475255 TAF3Q5VWG9 929 aa15.86■□□□□ 0.13
SEMA4D-217ENST00000475255 ATG9AQ7Z3C6 839 aa15.86■□□□□ 0.13
SEMA4D-217ENST00000475255 PHKBQ93100 1093 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms