RNA–Protein interactions for RNA: ENST00000475184.5

ITGB1-211, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-211ENST00000475184 ERO1AQ96HE7 468 aa20.4■□□□□ 0.86
ITGB1-211ENST00000475184 TRIOBPQ9H2D6 2365 aa20.39■□□□□ 0.86
ITGB1-211ENST00000475184 DDX10Q13206 875 aaKnown RBP20.39■□□□□ 0.85
ITGB1-211ENST00000475184 CERS5Q8N5B7 392 aa20.39■□□□□ 0.85
ITGB1-211ENST00000475184 MTMR14Q8NCE2 650 aa20.39■□□□□ 0.85
ITGB1-211ENST00000475184 CD209Q9NNX6 404 aa20.39■□□□□ 0.85
ITGB1-211ENST00000475184 UNCXA6NJT0 531 aa20.38■□□□□ 0.85
ITGB1-211ENST00000475184 CHRNDQ07001 517 aa20.38■□□□□ 0.85
ITGB1-211ENST00000475184 CRHR2Q13324 411 aa20.38■□□□□ 0.85
ITGB1-211ENST00000475184 CD99L2Q8TCZ2 262 aa20.38■□□□□ 0.85
ITGB1-211ENST00000475184 PLA2G12BQ9BX93 195 aa20.38■□□□□ 0.85
ITGB1-211ENST00000475184 STK31Q9BXU1 1019 aa20.38■□□□□ 0.85
ITGB1-211ENST00000475184 PTPN22Q9Y2R2 807 aa20.38■□□□□ 0.85
ITGB1-211ENST00000475184 MYO1BO43795 1136 aa20.37■□□□□ 0.85
ITGB1-211ENST00000475184 SUPT20HL1Q3ZLR7 823 aa20.37■□□□□ 0.85
ITGB1-211ENST00000475184 OTUD7BQ6GQQ9 843 aa20.37■□□□□ 0.85
ITGB1-211ENST00000475184 ARMC5Q96C12 935 aa20.37■□□□□ 0.85
ITGB1-211ENST00000475184 PCDHAC2Q9Y5I4 1007 aa20.37■□□□□ 0.85
ITGB1-211ENST00000475184 IRS2Q9Y4H2 1338 aa20.36■□□□□ 0.85
ITGB1-211ENST00000475184 CLRN2A0PK11 232 aa20.36■□□□□ 0.85
ITGB1-211ENST00000475184 IREB2P48200 963 aaKnown RBP20.36■□□□□ 0.85
ITGB1-211ENST00000475184 GCKRQ14397 625 aa20.36■□□□□ 0.85
ITGB1-211ENST00000475184 SPDYE2BA6NHP3 402 aa20.35■□□□□ 0.85
ITGB1-211ENST00000475184 F8W031 263 aaPredicted RBP20.35■□□□□ 0.85
ITGB1-211ENST00000475184 SPDYE6P0CI01 402 aa20.35■□□□□ 0.85
ITGB1-211ENST00000475184 GJA5P36382 358 aa20.35■□□□□ 0.85
ITGB1-211ENST00000475184 CFAP100Q494V2 611 aa20.35■□□□□ 0.85
ITGB1-211ENST00000475184 EFCC1Q9HA90 598 aa20.35■□□□□ 0.85
ITGB1-211ENST00000475184 VEZTQ9HBM0 779 aa20.35■□□□□ 0.85
ITGB1-211ENST00000475184 SNAP23O00161 211 aa20.34■□□□□ 0.85
ITGB1-211ENST00000475184 CSF1RP07333 972 aa20.34■□□□□ 0.85
ITGB1-211ENST00000475184 CASP7P55210 303 aa20.34■□□□□ 0.85
ITGB1-211ENST00000475184 NBPF12Q5TAG4 269 aaPredicted RBP20.34■□□□□ 0.85
ITGB1-211ENST00000475184 C15orf52Q6ZUT6 534 aaKnown RBP20.34■□□□□ 0.85
ITGB1-211ENST00000475184 G2E3Q7L622 706 aa20.34■□□□□ 0.85
ITGB1-211ENST00000475184 ARAP2Q8WZ64 1704 aa20.33■□□□□ 0.85
ITGB1-211ENST00000475184 TAF5LO75529 589 aa20.33■□□□□ 0.85
ITGB1-211ENST00000475184 EN2P19622 333 aaPredicted RBP20.33■□□□□ 0.85
ITGB1-211ENST00000475184 SP3Q02447 781 aa20.33■□□□□ 0.85
ITGB1-211ENST00000475184 ANKRD13AQ8IZ07 590 aa20.33■□□□□ 0.85
ITGB1-211ENST00000475184 TSR2Q969E8 191 aaKnown RBP20.33■□□□□ 0.85
ITGB1-211ENST00000475184 PRMT6Q96LA8 375 aaPredicted RBP20.33■□□□□ 0.85
ITGB1-211ENST00000475184 AOX1Q06278 1338 aa20.32■□□□□ 0.84
ITGB1-211ENST00000475184 TESPA1A2RU30 521 aaPredicted RBP20.32■□□□□ 0.84
ITGB1-211ENST00000475184 USP2O75604 605 aaPredicted RBP20.32■□□□□ 0.84
ITGB1-211ENST00000475184 IL1R1P14778 569 aa20.32■□□□□ 0.84
ITGB1-211ENST00000475184 FKBP1AP62942 108 aaKnown RBP20.32■□□□□ 0.84
ITGB1-211ENST00000475184 ZNF804AQ7Z570 1209 aa20.32■□□□□ 0.84
ITGB1-211ENST00000475184 HELBQ8NG08 1087 aaPredicted RBP20.32■□□□□ 0.84
ITGB1-211ENST00000475184 PTPN18Q99952 460 aa20.32■□□□□ 0.84
ITGB1-211ENST00000475184 MYH16Q9H6N6 1097 aa20.32■□□□□ 0.84
ITGB1-211ENST00000475184 ANKRD18BA2A2Z9 1011 aa20.31■□□□□ 0.84
ITGB1-211ENST00000475184 SLC4A2P04920 1241 aa20.31■□□□□ 0.84
ITGB1-211ENST00000475184 CAP1Q01518 475 aa20.31■□□□□ 0.84
ITGB1-211ENST00000475184 RASA3Q14644 834 aa20.31■□□□□ 0.84
ITGB1-211ENST00000475184 RBM5P52756 815 aaKnown RBP eCLIP20.3■□□□□ 0.84
ITGB1-211ENST00000475184 TWISTNBQ3B726 338 aaPredicted RBP20.3■□□□□ 0.84
ITGB1-211ENST00000475184 JAG2Q9Y219 1238 aa20.3■□□□□ 0.84
ITGB1-211ENST00000475184 FXR1P51114 621 aaKnown RBP eCLIP20.29■□□□□ 0.84
ITGB1-211ENST00000475184 FLIIQ13045 1269 aa20.29■□□□□ 0.84
ITGB1-211ENST00000475184 LINS1Q8NG48 757 aa20.29■□□□□ 0.84
ITGB1-211ENST00000475184 OPTNQ96CV9 577 aa20.29■□□□□ 0.84
ITGB1-211ENST00000475184 ZNF333Q96JL9 665 aa20.29■□□□□ 0.84
ITGB1-211ENST00000475184 TMEM106CQ9BVX2 250 aa20.29■□□□□ 0.84
ITGB1-211ENST00000475184 PRKRIP1Q9H875 184 aaPredicted RBP20.29■□□□□ 0.84
ITGB1-211ENST00000475184 ELP3Q9H9T3 547 aa20.29■□□□□ 0.84
ITGB1-211ENST00000475184 SZT2Q5T011 3432 aa20.29■□□□□ 0.84
ITGB1-211ENST00000475184 ZSWIM8A7E2V4 1837 aa20.28■□□□□ 0.84
ITGB1-211ENST00000475184 IFIT5Q13325 482 aaKnown RBP20.28■□□□□ 0.84
ITGB1-211ENST00000475184 TNFAIP1Q13829 316 aa20.28■□□□□ 0.84
ITGB1-211ENST00000475184 DNAAF4Q8WXU2 420 aa20.28■□□□□ 0.84
ITGB1-211ENST00000475184 MS4A4AQ96JQ5 239 aa20.28■□□□□ 0.84
ITGB1-211ENST00000475184 FKBP5Q13451 457 aaPredicted RBP20.27■□□□□ 0.84
ITGB1-211ENST00000475184 SLC9C1Q4G0N8 1177 aa20.27■□□□□ 0.84
ITGB1-211ENST00000475184 CHMP3Q9Y3E7 222 aa20.27■□□□□ 0.84
ITGB1-211ENST00000475184 RANBP2P49792 3224 aaKnown RBP20.27■□□□□ 0.84
ITGB1-211ENST00000475184 ARHGEF6Q15052 776 aa20.26■□□□□ 0.83
ITGB1-211ENST00000475184 SPDYE2Q495Y8 402 aa20.26■□□□□ 0.83
ITGB1-211ENST00000475184 NBPF11Q86T75 865 aa20.26■□□□□ 0.83
ITGB1-211ENST00000475184 BRI3BPQ8WY22 251 aa20.26■□□□□ 0.83
ITGB1-211ENST00000475184 FOXO4P98177 505 aa20.25■□□□□ 0.83
ITGB1-211ENST00000475184 TAF1CQ15572 869 aaPredicted RBP20.25■□□□□ 0.83
ITGB1-211ENST00000475184 ZNF70Q9UC06 446 aaPredicted RBP20.25■□□□□ 0.83
ITGB1-211ENST00000475184 PTCH2Q9Y6C5 1203 aa20.25■□□□□ 0.83
ITGB1-211ENST00000475184 FAM205AQ6ZU69 1335 aa20.25■□□□□ 0.83
ITGB1-211ENST00000475184 CCL15-CCL14A0A0B4J2E2 113 aa20.24■□□□□ 0.83
ITGB1-211ENST00000475184 CCL15Q16663 113 aa20.24■□□□□ 0.83
ITGB1-211ENST00000475184 MFSD14BQ5SR56 506 aa20.24■□□□□ 0.83
ITGB1-211ENST00000475184 PPP1R3FQ6ZSY5 799 aaPredicted RBP20.24■□□□□ 0.83
ITGB1-211ENST00000475184 CDAN1Q8IWY9 1227 aa20.24■□□□□ 0.83
ITGB1-211ENST00000475184 CNKSR2Q8WXI2 1034 aa20.24■□□□□ 0.83
ITGB1-211ENST00000475184 TEPSINQ96N21 525 aa20.24■□□□□ 0.83
ITGB1-211ENST00000475184 ZFYVE28Q9HCC9 887 aa20.24■□□□□ 0.83
ITGB1-211ENST00000475184 SERPINA10Q9UK55 444 aa20.24■□□□□ 0.83
ITGB1-211ENST00000475184 GTF2A2P52657 109 aa20.23■□□□□ 0.83
ITGB1-211ENST00000475184 VGLL4Q14135 290 aa20.23■□□□□ 0.83
ITGB1-211ENST00000475184 SLC4A8Q2Y0W8 1093 aa20.23■□□□□ 0.83
ITGB1-211ENST00000475184 TDRD3Q9H7E2 651 aaKnown RBP20.23■□□□□ 0.83
ITGB1-211ENST00000475184 TTF2Q9UNY4 1162 aaKnown RBP20.23■□□□□ 0.83
ITGB1-211ENST00000475184 COLQQ9Y215 455 aaPredicted RBP20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms