RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 PSMD1Q99460 953 aa4.82□□□□□ -1.64
USP16-205ENST00000474835 EIF3CQ99613 913 aaKnown RBP4.82□□□□□ -1.64
USP16-205ENST00000474835 USP44Q9H0E7 712 aa4.82□□□□□ -1.64
USP16-205ENST00000474835 SETD1BQ9UPS6 1966 aaKnown RBP4.82□□□□□ -1.64
USP16-205ENST00000474835 FLT4P35916 1363 aa4.82□□□□□ -1.64
USP16-205ENST00000474835 PLEKHG1Q9ULL1 1385 aa4.82□□□□□ -1.64
USP16-205ENST00000474835 MYBP10242 640 aa4.81□□□□□ -1.64
USP16-205ENST00000474835 ARHGAP25P42331 645 aa4.81□□□□□ -1.64
USP16-205ENST00000474835 SLC5A9Q2M3M2 681 aa4.81□□□□□ -1.64
USP16-205ENST00000474835 NAA16Q6N069 864 aaPredicted RBP4.81□□□□□ -1.64
USP16-205ENST00000474835 RTF1Q92541 710 aaKnown RBP4.81□□□□□ -1.64
USP16-205ENST00000474835 PNKPQ96T60 521 aa4.81□□□□□ -1.64
USP16-205ENST00000474835 C1orf115Q9H7X2 142 aa4.81□□□□□ -1.64
USP16-205ENST00000474835 MKRN1Q9UHC7 482 aaKnown RBP4.81□□□□□ -1.64
USP16-205ENST00000474835 ATP1B4Q9UN42 357 aaPredicted RBP4.81□□□□□ -1.64
USP16-205ENST00000474835 USP16Q9Y5T5 823 aa4.81□□□□□ -1.64
USP16-205ENST00000474835 C5orf60A6NFR6 353 aa4.81□□□□□ -1.64
USP16-205ENST00000474835 GSDMDP57764 484 aa4.81□□□□□ -1.64
USP16-205ENST00000474835 TWISTNBQ3B726 338 aaPredicted RBP4.81□□□□□ -1.64
USP16-205ENST00000474835 TC2NQ8N9U0 490 aa4.81□□□□□ -1.64
USP16-205ENST00000474835 RNF214Q8ND24 703 aa4.81□□□□□ -1.64
USP16-205ENST00000474835 ZSCAN31Q96LW9 406 aaPredicted RBP4.81□□□□□ -1.64
USP16-205ENST00000474835 TEX13AQ9BXU3 409 aaPredicted RBP4.81□□□□□ -1.64
USP16-205ENST00000474835 CXorf56Q9H5V9 222 aa4.81□□□□□ -1.64
USP16-205ENST00000474835 TAF6LQ9Y6J9 622 aa4.81□□□□□ -1.64
USP16-205ENST00000474835 LTBP4Q8N2S1 1624 aa4.81□□□□□ -1.64
USP16-205ENST00000474835 CCDC196A0A1B0GTZ2 297 aa4.81□□□□□ -1.64
USP16-205ENST00000474835 EXOC5O00471 708 aa4.81□□□□□ -1.64
USP16-205ENST00000474835 BIN1O00499 593 aa4.81□□□□□ -1.64
USP16-205ENST00000474835 PTH1RQ03431 593 aa4.81□□□□□ -1.64
USP16-205ENST00000474835 MAP3K11Q16584 847 aa4.81□□□□□ -1.64
USP16-205ENST00000474835 EFCAB2Q5VUJ9 269 aa4.81□□□□□ -1.64
USP16-205ENST00000474835 PAXIP1Q6ZW49 1069 aaPredicted RBP4.81□□□□□ -1.64
USP16-205ENST00000474835 VSTM4Q8IW00 320 aa4.81□□□□□ -1.64
USP16-205ENST00000474835 CCDC112Q8NEF3 446 aa4.81□□□□□ -1.64
USP16-205ENST00000474835 ATL2Q8NHH9 583 aa4.81□□□□□ -1.64
USP16-205ENST00000474835 LLPHQ9BRT6 129 aaKnown RBP4.81□□□□□ -1.64
USP16-205ENST00000474835 GDPD2Q9HCC8 539 aa4.81□□□□□ -1.64
USP16-205ENST00000474835 COL5A3P25940 1745 aaPredicted RBP4.8□□□□□ -1.64
USP16-205ENST00000474835 GOLIM4O00461 696 aa4.8□□□□□ -1.64
USP16-205ENST00000474835 TBC1D8BQ0IIM8 1120 aa4.8□□□□□ -1.64
USP16-205ENST00000474835 PDIA5Q14554 519 aa4.8□□□□□ -1.64
USP16-205ENST00000474835 RGL3Q3MIN7 710 aa4.8□□□□□ -1.64
USP16-205ENST00000474835 GORABQ5T7V8 394 aa4.8□□□□□ -1.64
USP16-205ENST00000474835 CCDC30Q5VVM6 783 aa4.8□□□□□ -1.64
USP16-205ENST00000474835 NEK11Q8NG66 645 aa4.8□□□□□ -1.64
USP16-205ENST00000474835 GTF3C6Q969F1 213 aa4.8□□□□□ -1.64
USP16-205ENST00000474835 SGSM3Q96HU1 749 aa4.8□□□□□ -1.64
USP16-205ENST00000474835 MPHOSPH8Q99549 860 aa4.8□□□□□ -1.64
USP16-205ENST00000474835 MAP3K14Q99558 947 aa4.8□□□□□ -1.64
USP16-205ENST00000474835 IRF6O14896 467 aa4.8□□□□□ -1.64
USP16-205ENST00000474835 DIAPH1O60610 1272 aaKnown RBP4.8□□□□□ -1.64
USP16-205ENST00000474835 RAB11FIP3O75154 756 aa4.8□□□□□ -1.64
USP16-205ENST00000474835 TXLNAP40222 546 aa4.8□□□□□ -1.64
USP16-205ENST00000474835 NEK4P51957 841 aa4.8□□□□□ -1.64
USP16-205ENST00000474835 SMC1AQ14683 1233 aaKnown RBP4.8□□□□□ -1.64
USP16-205ENST00000474835 LACTB2Q53H82 288 aaPredicted RBP4.8□□□□□ -1.64
USP16-205ENST00000474835 SAMD1Q6SPF0 538 aaPredicted RBP4.8□□□□□ -1.64
USP16-205ENST00000474835 ITIH6Q6UXX5 1313 aa4.8□□□□□ -1.64
USP16-205ENST00000474835 WDR19Q8NEZ3 1342 aa4.8□□□□□ -1.64
USP16-205ENST00000474835 A0A1B0GUL7 405 aa4.8□□□□□ -1.64
USP16-205ENST00000474835 TARSL2A2RTX5 802 aaKnown RBP4.8□□□□□ -1.64
USP16-205ENST00000474835 CCDC69A6NI79 296 aa4.8□□□□□ -1.64
USP16-205ENST00000474835 CTAGE5O15320 804 aa4.8□□□□□ -1.64
USP16-205ENST00000474835 CUTAO60888 179 aa4.8□□□□□ -1.64
USP16-205ENST00000474835 PPFIA4O75335 1185 aa4.8□□□□□ -1.64
USP16-205ENST00000474835 PAEPP09466 180 aa4.8□□□□□ -1.64
USP16-205ENST00000474835 TPM1P09493 284 aa4.8□□□□□ -1.64
USP16-205ENST00000474835 OAS2P29728 719 aaKnown RBP4.8□□□□□ -1.64
USP16-205ENST00000474835 TNNT2P45379 298 aaPredicted RBP4.8□□□□□ -1.64
USP16-205ENST00000474835 IDI1Q13907 227 aa4.8□□□□□ -1.64
USP16-205ENST00000474835 ZC3H12AQ5D1E8 599 aaKnown RBP4.8□□□□□ -1.64
USP16-205ENST00000474835 CD302Q8IX05 232 aa4.8□□□□□ -1.64
USP16-205ENST00000474835 CCDC150Q8NCX0 1101 aa4.8□□□□□ -1.64
USP16-205ENST00000474835 AENQ8WTP8 325 aaKnown RBP4.8□□□□□ -1.64
USP16-205ENST00000474835 C16orf45Q96MC5 204 aaPredicted RBP4.8□□□□□ -1.64
USP16-205ENST00000474835 PARD6BQ9BYG5 372 aa4.8□□□□□ -1.64
USP16-205ENST00000474835 RTEL1Q9NZ71 1219 aa4.8□□□□□ -1.64
USP16-205ENST00000474835 SLIT2O94813 1529 aa4.8□□□□□ -1.64
USP16-205ENST00000474835 PRR36Q9H6K5 1346 aa4.8□□□□□ -1.64
USP16-205ENST00000474835 LRRC10BA6NIK2 292 aa4.79□□□□□ -1.64
USP16-205ENST00000474835 LRRIQ3A6PVS8 624 aaPredicted RBP4.79□□□□□ -1.64
USP16-205ENST00000474835 TUBB4BP68371 445 aa4.79□□□□□ -1.64
USP16-205ENST00000474835 LMNB2Q03252 620 aa4.79□□□□□ -1.64
USP16-205ENST00000474835 TUBB2AQ13885 445 aa4.79□□□□□ -1.64
USP16-205ENST00000474835 PTPAQ15257 358 aa4.79□□□□□ -1.64
USP16-205ENST00000474835 KRBA2Q6ZNG9 492 aa4.79□□□□□ -1.64
USP16-205ENST00000474835 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.79□□□□□ -1.64
USP16-205ENST00000474835 RASGRP2Q7LDG7 609 aa4.79□□□□□ -1.64
USP16-205ENST00000474835 ARHGEF25Q86VW2 580 aa4.79□□□□□ -1.64
USP16-205ENST00000474835 PIK3R5Q8WYR1 880 aa4.79□□□□□ -1.64
USP16-205ENST00000474835 MIEF2Q96C03 454 aa4.79□□□□□ -1.64
USP16-205ENST00000474835 CFAP53Q96M91 514 aa4.79□□□□□ -1.64
USP16-205ENST00000474835 WDR24Q96S15 920 aa4.79□□□□□ -1.64
USP16-205ENST00000474835 TUBB2BQ9BVA1 445 aa4.79□□□□□ -1.64
USP16-205ENST00000474835 EBF2Q9HAK2 575 aa4.79□□□□□ -1.64
USP16-205ENST00000474835 FOXD4L1Q9NU39 408 aa4.79□□□□□ -1.64
USP16-205ENST00000474835 MROH7-TTC4A0A0A0MT08 1334 aa4.79□□□□□ -1.64
USP16-205ENST00000474835 QSER1Q2KHR3 1735 aa4.79□□□□□ -1.64
USP16-205ENST00000474835 FDPSP14324 419 aaKnown RBP4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms