RNA–Protein interactions for RNA: ENST00000474412.1

VPS50-211, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-211ENST00000474412 STAG2Q8N3U4 1231 aa10.02□□□□□ -0.81
VPS50-211ENST00000474412 NGLY1Q96IV0 654 aa10.02□□□□□ -0.81
VPS50-211ENST00000474412 C2orf49Q9BVC5 232 aaPredicted RBP10.02□□□□□ -0.81
VPS50-211ENST00000474412 NDFIP2Q9NV92 336 aa10.02□□□□□ -0.81
VPS50-211ENST00000474412 GPC6Q9Y625 555 aaPredicted RBP10.02□□□□□ -0.81
VPS50-211ENST00000474412 RALGAPBQ86X10 1494 aa10.02□□□□□ -0.81
VPS50-211ENST00000474412 USP54Q70EL1 1684 aa10.02□□□□□ -0.81
VPS50-211ENST00000474412 THSD7AQ9UPZ6 1657 aa10.02□□□□□ -0.81
VPS50-211ENST00000474412 TNS1Q9HBL0 1735 aaKnown RBP10.02□□□□□ -0.81
VPS50-211ENST00000474412 SBNO1A3KN83 1393 aa10.01□□□□□ -0.81
VPS50-211ENST00000474412 EIF3AQ14152 1382 aaKnown RBP10.01□□□□□ -0.81
VPS50-211ENST00000474412 KHNYNO15037 678 aaKnown RBP10.01□□□□□ -0.81
VPS50-211ENST00000474412 ATG7O95352 703 aa10.01□□□□□ -0.81
VPS50-211ENST00000474412 SRPK2P78362 688 aaKnown RBP10.01□□□□□ -0.81
VPS50-211ENST00000474412 ELOAQ14241 798 aaKnown RBP10.01□□□□□ -0.81
VPS50-211ENST00000474412 C1orf53Q5VUE5 145 aa10.01□□□□□ -0.81
VPS50-211ENST00000474412 ZNF385CQ66K41 422 aaPredicted RBP10.01□□□□□ -0.81
VPS50-211ENST00000474412 KRT28Q7Z3Y7 464 aa10.01□□□□□ -0.81
VPS50-211ENST00000474412 WHAMMQ8TF30 809 aa10.01□□□□□ -0.81
VPS50-211ENST00000474412 C1orf115Q9H7X2 142 aa10.01□□□□□ -0.81
VPS50-211ENST00000474412 ZMIZ1Q9ULJ6 1067 aa10.01□□□□□ -0.81
VPS50-211ENST00000474412 MYOM1P52179 1685 aa10□□□□□ -0.81
VPS50-211ENST00000474412 BMP4P12644 408 aa10□□□□□ -0.81
VPS50-211ENST00000474412 MAP2K3P46734 347 aa10□□□□□ -0.81
VPS50-211ENST00000474412 MAP3K10Q02779 954 aa10□□□□□ -0.81
VPS50-211ENST00000474412 NEUROD1Q13562 356 aa10□□□□□ -0.81
VPS50-211ENST00000474412 ALDH16A1Q8IZ83 802 aa10□□□□□ -0.81
VPS50-211ENST00000474412 STK32AQ8WU08 396 aa10□□□□□ -0.81
VPS50-211ENST00000474412 COL18A1P39060 1754 aa10□□□□□ -0.81
VPS50-211ENST00000474412 FAM157BP0CG42 384 aa9.99□□□□□ -0.81
VPS50-211ENST00000474412 MAPTP10636 758 aaKnown RBP9.99□□□□□ -0.81
VPS50-211ENST00000474412 NBPF8Q3BBV2 869 aa9.99□□□□□ -0.81
VPS50-211ENST00000474412 VTI1AQ96AJ9 217 aa9.99□□□□□ -0.81
VPS50-211ENST00000474412 USP21Q9UK80 565 aa9.99□□□□□ -0.81
VPS50-211ENST00000474412 PPIP5K1Q6PFW1 1433 aa9.99□□□□□ -0.81
VPS50-211ENST00000474412 WEE1P30291 646 aa9.98□□□□□ -0.81
VPS50-211ENST00000474412 CTBSQ01459 385 aa9.98□□□□□ -0.81
VPS50-211ENST00000474412 SWI5Q1ZZU3 235 aa9.98□□□□□ -0.81
VPS50-211ENST00000474412 SAMD5Q5TGI4 173 aa9.98□□□□□ -0.81
VPS50-211ENST00000474412 LYPD4Q6UWN0 246 aa9.98□□□□□ -0.81
VPS50-211ENST00000474412 HSH2DQ96JZ2 352 aa9.98□□□□□ -0.81
VPS50-211ENST00000474412 ANKIB1Q9P2G1 1089 aa9.98□□□□□ -0.81
VPS50-211ENST00000474412 POLR3AO14802 1390 aaPredicted RBP9.98□□□□□ -0.81
VPS50-211ENST00000474412 ARHGEF10O15013 1369 aa9.98□□□□□ -0.81
VPS50-211ENST00000474412 ROCK2O75116 1388 aaKnown RBP9.98□□□□□ -0.81
VPS50-211ENST00000474412 RGPD1P0DJD0 1748 aa9.97□□□□□ -0.81
VPS50-211ENST00000474412 CD33P20138 364 aa9.97□□□□□ -0.81
VPS50-211ENST00000474412 RXRBP28702 533 aa9.97□□□□□ -0.81
VPS50-211ENST00000474412 TNP2Q05952 138 aa9.97□□□□□ -0.81
VPS50-211ENST00000474412 QTRT2Q9H974 415 aaKnown RBP9.97□□□□□ -0.81
VPS50-211ENST00000474412 KIF20BQ96Q89 1820 aa9.97□□□□□ -0.81
VPS50-211ENST00000474412 CENPJQ9HC77 1338 aaPredicted RBP9.97□□□□□ -0.81
VPS50-211ENST00000474412 GPRASP1Q5JY77 1395 aa9.97□□□□□ -0.81
VPS50-211ENST00000474412 SLIT3O75094 1523 aa9.97□□□□□ -0.81
VPS50-211ENST00000474412 PRMT3O60678 531 aa9.96□□□□□ -0.82
VPS50-211ENST00000474412 CELA2BP08218 269 aaPredicted RBP9.96□□□□□ -0.82
VPS50-211ENST00000474412 C7orf43Q8WVR3 580 aa9.96□□□□□ -0.82
VPS50-211ENST00000474412 ACDQ96AP0 544 aa9.96□□□□□ -0.82
VPS50-211ENST00000474412 NUDT16Q96DE0 195 aaKnown RBP9.96□□□□□ -0.82
VPS50-211ENST00000474412 PRIMPOLQ96LW4 560 aa9.96□□□□□ -0.82
VPS50-211ENST00000474412 CDK19Q9BWU1 502 aa9.96□□□□□ -0.82
VPS50-211ENST00000474412 OXCT2Q9BYC2 517 aaPredicted RBP9.96□□□□□ -0.82
VPS50-211ENST00000474412 LRRC37A3O60309 1634 aa9.96□□□□□ -0.82
VPS50-211ENST00000474412 PARP4Q9UKK3 1724 aaKnown RBP9.96□□□□□ -0.82
VPS50-211ENST00000474412 RGPD2P0DJD1 1756 aa9.96□□□□□ -0.82
VPS50-211ENST00000474412 SBF2Q86WG5 1849 aa9.96□□□□□ -0.82
VPS50-211ENST00000474412 EP400Q96L91 3159 aa9.96□□□□□ -0.82
VPS50-211ENST00000474412 RBM6P78332 1123 aaKnown RBP9.95□□□□□ -0.82
VPS50-211ENST00000474412 HIF1AQ16665 826 aa9.95□□□□□ -0.82
VPS50-211ENST00000474412 RTN1Q16799 776 aa9.95□□□□□ -0.82
VPS50-211ENST00000474412 TMEM164Q5U3C3 297 aa9.95□□□□□ -0.82
VPS50-211ENST00000474412 KLRG1Q96E93 195 aa9.95□□□□□ -0.82
VPS50-211ENST00000474412 SUSD3Q96L08 255 aa9.95□□□□□ -0.82
VPS50-211ENST00000474412 TIMELESSQ9UNS1 1208 aa9.95□□□□□ -0.82
VPS50-211ENST00000474412 USP6P35125 1406 aa9.94□□□□□ -0.82
VPS50-211ENST00000474412 TONSLQ96HA7 1378 aa9.94□□□□□ -0.82
VPS50-211ENST00000474412 ACEP12821 1306 aa9.94□□□□□ -0.82
VPS50-211ENST00000474412 C2CD2LO14523 706 aa9.94□□□□□ -0.82
VPS50-211ENST00000474412 BCRP11274 1271 aa9.94□□□□□ -0.82
VPS50-211ENST00000474412 TRIM26Q12899 539 aaPredicted RBP9.94□□□□□ -0.82
VPS50-211ENST00000474412 NGDNQ8NEJ9 315 aaKnown RBP9.94□□□□□ -0.82
VPS50-211ENST00000474412 CEP63Q96MT8 703 aa9.94□□□□□ -0.82
VPS50-211ENST00000474412 ENAMQ9NRM1 1142 aa9.94□□□□□ -0.82
VPS50-211ENST00000474412 MARK1Q9P0L2 795 aa9.94□□□□□ -0.82
VPS50-211ENST00000474412 TRPC5Q9UL62 973 aaPredicted RBP9.94□□□□□ -0.82
VPS50-211ENST00000474412 CAMTA1Q9Y6Y1 1673 aa9.93□□□□□ -0.82
VPS50-211ENST00000474412 CD163L1Q9NR16 1453 aa9.93□□□□□ -0.82
VPS50-211ENST00000474412 EFSO43281 561 aa9.93□□□□□ -0.82
VPS50-211ENST00000474412 LAMC2Q13753 1193 aa9.93□□□□□ -0.82
VPS50-211ENST00000474412 NUTM2GQ5VZR2 741 aa9.93□□□□□ -0.82
VPS50-211ENST00000474412 ZNF280CQ8ND82 737 aa9.93□□□□□ -0.82
VPS50-211ENST00000474412 GDF2Q9UK05 429 aaPredicted RBP9.93□□□□□ -0.82
VPS50-211ENST00000474412 NFAT5O94916 1531 aa9.92□□□□□ -0.82
VPS50-211ENST00000474412 SSH2Q76I76 1423 aa9.92□□□□□ -0.82
VPS50-211ENST00000474412 FAM182BQ5T319 152 aa9.92□□□□□ -0.82
VPS50-211ENST00000474412 GOLGA6L1Q8N7Z2 621 aa9.92□□□□□ -0.82
VPS50-211ENST00000474412 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.92□□□□□ -0.82
VPS50-211ENST00000474412 PRR12Q9ULL5 1215 aa9.92□□□□□ -0.82
VPS50-211ENST00000474412 ADAMTS8Q9UP79 889 aa9.92□□□□□ -0.82
VPS50-211ENST00000474412 RREB1Q92766 1687 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 146.4 ms