RNA–Protein interactions for RNA: ENST00000474323.5

SAMM50-203, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 2,368 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-203ENST00000474323 HOXB7P09629 217 aa16.86■□□□□ 0.29
SAMM50-203ENST00000474323 IL2RBP14784 551 aa16.86■□□□□ 0.29
SAMM50-203ENST00000474323 TSGA10IPQ3SY00 556 aa16.86■□□□□ 0.29
SAMM50-203ENST00000474323 ATL3Q6DD88 541 aa16.86■□□□□ 0.29
SAMM50-203ENST00000474323 TMC6Q7Z403 805 aa16.86■□□□□ 0.29
SAMM50-203ENST00000474323 C10orf67Q8IYJ2 551 aa16.86■□□□□ 0.29
SAMM50-203ENST00000474323 ZCRB1Q8TBF4 217 aaKnown RBP16.86■□□□□ 0.29
SAMM50-203ENST00000474323 SYTL4Q96C24 671 aaPredicted RBP16.86■□□□□ 0.29
SAMM50-203ENST00000474323 BPIFA3Q9BQP9 254 aa16.86■□□□□ 0.29
SAMM50-203ENST00000474323 ZCCHC17Q9NP64 241 aaKnown RBP16.86■□□□□ 0.29
SAMM50-203ENST00000474323 ATG3Q9NT62 314 aa16.86■□□□□ 0.29
SAMM50-203ENST00000474323 ADD1P35611 737 aaKnown RBP16.85■□□□□ 0.29
SAMM50-203ENST00000474323 SRLQ86TD4 932 aa16.85■□□□□ 0.29
SAMM50-203ENST00000474323 GPR161Q8N6U8 529 aaKnown RBP16.85■□□□□ 0.29
SAMM50-203ENST00000474323 GOLPH3LQ9H4A5 285 aa16.85■□□□□ 0.29
SAMM50-203ENST00000474323 STK3Q13188 491 aa16.85■□□□□ 0.29
SAMM50-203ENST00000474323 ZNF790Q6PG37 636 aa16.85■□□□□ 0.29
SAMM50-203ENST00000474323 TRIM65Q6PJ69 517 aa16.85■□□□□ 0.29
SAMM50-203ENST00000474323 REXO1L1PQ8IX06 675 aa16.85■□□□□ 0.29
SAMM50-203ENST00000474323 XPO4Q9C0E2 1151 aaKnown RBP16.85■□□□□ 0.29
SAMM50-203ENST00000474323 HMG20BQ9P0W2 317 aa16.85■□□□□ 0.29
SAMM50-203ENST00000474323 TRIM66O15016 1216 aa16.84■□□□□ 0.29
SAMM50-203ENST00000474323 URI1O94763 535 aaPredicted RBP16.84■□□□□ 0.29
SAMM50-203ENST00000474323 COL9A3Q14050 684 aaPredicted RBP16.84■□□□□ 0.29
SAMM50-203ENST00000474323 ARFGAP3Q9NP61 516 aa16.84■□□□□ 0.29
SAMM50-203ENST00000474323 PLEKHG2Q9H7P9 1386 aa16.84■□□□□ 0.29
SAMM50-203ENST00000474323 PHLPP1O60346 1717 aa16.84■□□□□ 0.29
SAMM50-203ENST00000474323 PCDH11XQ9BZA7 1347 aa16.84■□□□□ 0.29
SAMM50-203ENST00000474323 PCDH11YQ9BZA8 1340 aa16.84■□□□□ 0.29
SAMM50-203ENST00000474323 SMC2O95347 1197 aa16.84■□□□□ 0.29
SAMM50-203ENST00000474323 TMED8Q6PL24 325 aaPredicted RBP16.84■□□□□ 0.29
SAMM50-203ENST00000474323 GOLGA6L1Q8N7Z2 621 aa16.84■□□□□ 0.29
SAMM50-203ENST00000474323 TCEANC2Q96MN5 208 aa16.84■□□□□ 0.29
SAMM50-203ENST00000474323 CARD6Q9BX69 1037 aa16.84■□□□□ 0.29
SAMM50-203ENST00000474323 GEMIN8Q9NWZ8 242 aaKnown RBP16.84■□□□□ 0.29
SAMM50-203ENST00000474323 IFNKQ9P0W0 207 aa16.84■□□□□ 0.29
SAMM50-203ENST00000474323 LCMT1Q9UIC8 334 aa16.84■□□□□ 0.29
SAMM50-203ENST00000474323 JAK2O60674 1132 aa16.83■□□□□ 0.28
SAMM50-203ENST00000474323 EVCP57679 992 aa16.83■□□□□ 0.28
SAMM50-203ENST00000474323 OS9Q13438 667 aaPredicted RBP16.83■□□□□ 0.28
SAMM50-203ENST00000474323 CERS3Q8IU89 383 aa16.83■□□□□ 0.28
SAMM50-203ENST00000474323 RGS22Q8NE09 1264 aa16.83■□□□□ 0.28
SAMM50-203ENST00000474323 ADAM21Q9UKJ8 722 aa16.83■□□□□ 0.28
SAMM50-203ENST00000474323 HEG1Q9ULI3 1381 aa16.83■□□□□ 0.28
SAMM50-203ENST00000474323 DDX11Q96FC9 970 aa16.82■□□□□ 0.28
SAMM50-203ENST00000474323 RRP15Q9Y3B9 282 aaKnown RBP16.82■□□□□ 0.28
SAMM50-203ENST00000474323 PARP3Q9Y6F1 533 aa16.82■□□□□ 0.28
SAMM50-203ENST00000474323 IFIT2P09913 472 aaKnown RBP16.82■□□□□ 0.28
SAMM50-203ENST00000474323 ACTN2P35609 894 aa16.82■□□□□ 0.28
SAMM50-203ENST00000474323 CABP4P57796 275 aa16.82■□□□□ 0.28
SAMM50-203ENST00000474323 CEBPZQ03701 1054 aaKnown RBP16.82■□□□□ 0.28
SAMM50-203ENST00000474323 NMIQ13287 307 aaPredicted RBP16.82■□□□□ 0.28
SAMM50-203ENST00000474323 NAA16Q6N069 864 aaPredicted RBP16.82■□□□□ 0.28
SAMM50-203ENST00000474323 FAM227BQ96M60 508 aa16.82■□□□□ 0.28
SAMM50-203ENST00000474323 COL22A1Q8NFW1 1626 aaPredicted RBP16.81■□□□□ 0.28
SAMM50-203ENST00000474323 A0A087WWV3 80 aa16.81■□□□□ 0.28
SAMM50-203ENST00000474323 ADAMTS2O95450 1211 aa16.81■□□□□ 0.28
SAMM50-203ENST00000474323 KRT32Q14532 448 aa16.81■□□□□ 0.28
SAMM50-203ENST00000474323 NOM1Q5C9Z4 860 aaKnown RBP16.81■□□□□ 0.28
SAMM50-203ENST00000474323 MPHOSPH8Q99549 860 aa16.81■□□□□ 0.28
SAMM50-203ENST00000474323 COL14A1Q05707 1796 aaKnown RBP16.81■□□□□ 0.28
SAMM50-203ENST00000474323 TOM1O60784 492 aa16.81■□□□□ 0.28
SAMM50-203ENST00000474323 IVLP07476 585 aa16.81■□□□□ 0.28
SAMM50-203ENST00000474323 NBPF7P0C2Y1 421 aaPredicted RBP16.81■□□□□ 0.28
SAMM50-203ENST00000474323 ICE2Q659A1 982 aa16.81■□□□□ 0.28
SAMM50-203ENST00000474323 FCHSD1Q86WN1 690 aa16.81■□□□□ 0.28
SAMM50-203ENST00000474323 ZNF396Q96N95 335 aaPredicted RBP16.81■□□□□ 0.28
SAMM50-203ENST00000474323 FUT8Q9BYC5 575 aa16.81■□□□□ 0.28
SAMM50-203ENST00000474323 DBF4Q9UBU7 674 aaPredicted RBP16.81■□□□□ 0.28
SAMM50-203ENST00000474323 COL16A1Q07092 1604 aaPredicted RBP16.81■□□□□ 0.28
SAMM50-203ENST00000474323 GTF2A1P52655 376 aaPredicted RBP16.8■□□□□ 0.28
SAMM50-203ENST00000474323 ZRSR1Q15695 479 aaKnown RBP16.8■□□□□ 0.28
SAMM50-203ENST00000474323 PROSER3Q2NL68 480 aa16.8■□□□□ 0.28
SAMM50-203ENST00000474323 JAKMIP3Q5VZ66 844 aa16.8■□□□□ 0.28
SAMM50-203ENST00000474323 ERC1Q8IUD2 1116 aa16.8■□□□□ 0.28
SAMM50-203ENST00000474323 TTC5Q8N0Z6 440 aa16.8■□□□□ 0.28
SAMM50-203ENST00000474323 FSIP1Q8NA03 581 aa16.8■□□□□ 0.28
SAMM50-203ENST00000474323 ZNF496Q96IT1 587 aaPredicted RBP16.8■□□□□ 0.28
SAMM50-203ENST00000474323 LLPHQ9BRT6 129 aaKnown RBP16.8■□□□□ 0.28
SAMM50-203ENST00000474323 MRC1P22897 1456 aa16.8■□□□□ 0.28
SAMM50-203ENST00000474323 LMAN1P49257 510 aa16.8■□□□□ 0.28
SAMM50-203ENST00000474323 CCDC34Q96HJ3 373 aa16.8■□□□□ 0.28
SAMM50-203ENST00000474323 SDF4Q9BRK5 362 aa16.8■□□□□ 0.28
SAMM50-203ENST00000474323 ZSCAN12O43309 604 aa16.79■□□□□ 0.28
SAMM50-203ENST00000474323 MTX1Q13505 466 aa16.79■□□□□ 0.28
SAMM50-203ENST00000474323 FMR1NBQ8N0W7 255 aaPredicted RBP16.79■□□□□ 0.28
SAMM50-203ENST00000474323 SMARCC2Q8TAQ2 1214 aa16.79■□□□□ 0.28
SAMM50-203ENST00000474323 RABGGTAQ92696 567 aa16.79■□□□□ 0.28
SAMM50-203ENST00000474323 TMX1Q9H3N1 280 aa16.79■□□□□ 0.28
SAMM50-203ENST00000474323 BRMS1Q9HCU9 246 aa16.79■□□□□ 0.28
SAMM50-203ENST00000474323 KIAA1468Q9P260 1216 aa16.79■□□□□ 0.28
SAMM50-203ENST00000474323 SHANK3Q9BYB0 1731 aa16.79■□□□□ 0.28
SAMM50-203ENST00000474323 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.79■□□□□ 0.28
SAMM50-203ENST00000474323 MAP3K9P80192 1104 aa16.79■□□□□ 0.28
SAMM50-203ENST00000474323 RSRC2Q7L4I2 434 aaKnown RBP16.79■□□□□ 0.28
SAMM50-203ENST00000474323 C5P01031 1676 aa16.78■□□□□ 0.28
SAMM50-203ENST00000474323 PI4KAP2A4QPH2 592 aa16.78■□□□□ 0.28
SAMM50-203ENST00000474323 NUTM2BA6NNL0 878 aaPredicted RBP16.78■□□□□ 0.28
SAMM50-203ENST00000474323 NUTM2EB1AL46 878 aaPredicted RBP16.78■□□□□ 0.28
SAMM50-203ENST00000474323 FANCGO15287 622 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms