RNA–Protein interactions for RNA: ENST00000474283.1

LDLRAP1-204, Transcript of low density lipoprotein receptor adaptor protein 1, humanhuman

TSL 3

Gene LDLRAP1, Length 913 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAP1-204ENST00000474283 KIAA2012Q0VF49 1180 aa16.61■□□□□ 0.25
LDLRAP1-204ENST00000474283 LRRFIP1Q32MZ4 808 aaKnown RBP16.61■□□□□ 0.25
LDLRAP1-204ENST00000474283 FBXO33Q7Z6M2 555 aa16.61■□□□□ 0.25
LDLRAP1-204ENST00000474283 IL27Q8NEV9 243 aa16.61■□□□□ 0.25
LDLRAP1-204ENST00000474283 RUFY2Q8WXA3 655 aa16.61■□□□□ 0.25
LDLRAP1-204ENST00000474283 DBNDD1Q9H9R9 158 aa16.61■□□□□ 0.25
LDLRAP1-204ENST00000474283 GNL3LQ9NVN8 582 aaKnown RBP16.61■□□□□ 0.25
LDLRAP1-204ENST00000474283 SALL3Q9BXA9 1300 aa16.61■□□□□ 0.25
LDLRAP1-204ENST00000474283 COL4A5P29400 1685 aa16.6■□□□□ 0.25
LDLRAP1-204ENST00000474283 GRIN3BO60391 1043 aa16.6■□□□□ 0.25
LDLRAP1-204ENST00000474283 UQCRFS1P1P0C7P4 283 aa16.6■□□□□ 0.25
LDLRAP1-204ENST00000474283 UTRNP46939 3433 aa16.6■□□□□ 0.25
LDLRAP1-204ENST00000474283 MYH2Q9UKX2 1941 aa16.59■□□□□ 0.25
LDLRAP1-204ENST00000474283 EPB41L2O43491 1005 aaKnown RBP16.59■□□□□ 0.25
LDLRAP1-204ENST00000474283 ECE2O60344 883 aa16.59■□□□□ 0.25
LDLRAP1-204ENST00000474283 SDSP20132 328 aa16.59■□□□□ 0.25
LDLRAP1-204ENST00000474283 NIM1KQ8IY84 436 aa16.59■□□□□ 0.25
LDLRAP1-204ENST00000474283 FBXW7Q969H0 707 aa16.59■□□□□ 0.25
LDLRAP1-204ENST00000474283 COA1Q9GZY4 146 aa16.59■□□□□ 0.25
LDLRAP1-204ENST00000474283 VPS33BQ9H267 617 aa16.59■□□□□ 0.25
LDLRAP1-204ENST00000474283 CD209Q9NNX6 404 aa16.59■□□□□ 0.25
LDLRAP1-204ENST00000474283 ATP5JP18859 108 aa16.58■□□□□ 0.24
LDLRAP1-204ENST00000474283 CHAF1AQ13111 956 aaPredicted RBP16.58■□□□□ 0.24
LDLRAP1-204ENST00000474283 BECN1Q14457 450 aa16.58■□□□□ 0.24
LDLRAP1-204ENST00000474283 JDP2Q8WYK2 163 aa16.58■□□□□ 0.24
LDLRAP1-204ENST00000474283 BOLA2Q9H3K6 86 aa16.58■□□□□ 0.24
LDLRAP1-204ENST00000474283 SNRKQ9NRH2 765 aa16.58■□□□□ 0.24
LDLRAP1-204ENST00000474283 GSPT1P15170 499 aaKnown RBP16.57■□□□□ 0.24
LDLRAP1-204ENST00000474283 LMNB1P20700 586 aa16.57■□□□□ 0.24
LDLRAP1-204ENST00000474283 MCCP23508 829 aa16.57■□□□□ 0.24
LDLRAP1-204ENST00000474283 ARID4AP29374 1257 aaPredicted RBP16.57■□□□□ 0.24
LDLRAP1-204ENST00000474283 MCAMP43121 646 aa16.57■□□□□ 0.24
LDLRAP1-204ENST00000474283 PRELPP51888 382 aa16.57■□□□□ 0.24
LDLRAP1-204ENST00000474283 RASGRF1Q13972 1273 aa16.57■□□□□ 0.24
LDLRAP1-204ENST00000474283 SCARF1Q14162 830 aa16.57■□□□□ 0.24
LDLRAP1-204ENST00000474283 RILPL2Q969X0 211 aa16.57■□□□□ 0.24
LDLRAP1-204ENST00000474283 EVI5LQ96CN4 794 aa16.57■□□□□ 0.24
LDLRAP1-204ENST00000474283 DNAJC2Q99543 621 aaKnown RBP16.57■□□□□ 0.24
LDLRAP1-204ENST00000474283 JAG2Q9Y219 1238 aa16.57■□□□□ 0.24
LDLRAP1-204ENST00000474283 MAST2Q6P0Q8 1798 aa16.56■□□□□ 0.24
LDLRAP1-204ENST00000474283 COL1A1P02452 1464 aaPredicted RBP16.56■□□□□ 0.24
LDLRAP1-204ENST00000474283 MAP4K4O95819 1239 aaPredicted RBP16.56■□□□□ 0.24
LDLRAP1-204ENST00000474283 IL1R1P14778 569 aa16.56■□□□□ 0.24
LDLRAP1-204ENST00000474283 PI16Q6UXB8 463 aa16.56■□□□□ 0.24
LDLRAP1-204ENST00000474283 TBC1D9Q6ZT07 1266 aa16.56■□□□□ 0.24
LDLRAP1-204ENST00000474283 TDRD7Q8NHU6 1098 aaKnown RBP16.56■□□□□ 0.24
LDLRAP1-204ENST00000474283 PI4K2BQ8TCG2 481 aa16.56■□□□□ 0.24
LDLRAP1-204ENST00000474283 RNF181Q9P0P0 153 aa16.56■□□□□ 0.24
LDLRAP1-204ENST00000474283 DENND2AQ9ULE3 1009 aa16.56■□□□□ 0.24
LDLRAP1-204ENST00000474283 NDUFB9Q9Y6M9 179 aa16.56■□□□□ 0.24
LDLRAP1-204ENST00000474283 RFX7Q2KHR2 1363 aa16.55■□□□□ 0.24
LDLRAP1-204ENST00000474283 SEMA3EO15041 775 aa16.55■□□□□ 0.24
LDLRAP1-204ENST00000474283 MFAP1P55081 439 aaKnown RBP16.55■□□□□ 0.24
LDLRAP1-204ENST00000474283 PODNQ7Z5L7 613 aa16.55■□□□□ 0.24
LDLRAP1-204ENST00000474283 SPATA5Q8NB90 893 aa16.55■□□□□ 0.24
LDLRAP1-204ENST00000474283 ZNF512BQ96KM6 892 aaPredicted RBP16.55■□□□□ 0.24
LDLRAP1-204ENST00000474283 HMG20BQ9P0W2 317 aa16.55■□□□□ 0.24
LDLRAP1-204ENST00000474283 YDJCA8MPS7 323 aa16.54■□□□□ 0.24
LDLRAP1-204ENST00000474283 ZAP70P43403 619 aa16.54■□□□□ 0.24
LDLRAP1-204ENST00000474283 GTF2IP78347 998 aa16.54■□□□□ 0.24
LDLRAP1-204ENST00000474283 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.54■□□□□ 0.24
LDLRAP1-204ENST00000474283 TBC1D32Q96NH3 1257 aa16.54■□□□□ 0.24
LDLRAP1-204ENST00000474283 C22orf23Q9BZE7 217 aa16.54■□□□□ 0.24
LDLRAP1-204ENST00000474283 KCNQ5Q9NR82 932 aa16.54■□□□□ 0.24
LDLRAP1-204ENST00000474283 DIAPH3Q9NSV4 1193 aa16.54■□□□□ 0.24
LDLRAP1-204ENST00000474283 ZNRF3Q9ULT6 936 aa16.54■□□□□ 0.24
LDLRAP1-204ENST00000474283 GOLIM4O00461 696 aa16.53■□□□□ 0.24
LDLRAP1-204ENST00000474283 RAD17O75943 681 aa16.53■□□□□ 0.24
LDLRAP1-204ENST00000474283 C9orf131Q5VYM1 1079 aa16.53■□□□□ 0.24
LDLRAP1-204ENST00000474283 TTLL5Q6EMB2 1281 aa16.53■□□□□ 0.24
LDLRAP1-204ENST00000474283 KIAA1211Q6ZU35 1233 aa16.53■□□□□ 0.24
LDLRAP1-204ENST00000474283 IPO9Q96P70 1041 aaKnown RBP16.53■□□□□ 0.24
LDLRAP1-204ENST00000474283 HAUS7Q99871 368 aa16.53■□□□□ 0.24
LDLRAP1-204ENST00000474283 ADAMTSL1Q8N6G6 1762 aa16.53■□□□□ 0.24
LDLRAP1-204ENST00000474283 EDC3Q96F86 508 aaKnown RBP16.52■□□□□ 0.24
LDLRAP1-204ENST00000474283 PAG1Q9NWQ8 432 aa16.52■□□□□ 0.24
LDLRAP1-204ENST00000474283 ABCF2Q9UG63 623 aa16.52■□□□□ 0.24
LDLRAP1-204ENST00000474283 RAD50Q92878 1312 aa16.51■□□□□ 0.23
LDLRAP1-204ENST00000474283 USP17L3A6NCW0 530 aa16.51■□□□□ 0.23
LDLRAP1-204ENST00000474283 USP17L4A6NCW7 530 aa16.51■□□□□ 0.23
LDLRAP1-204ENST00000474283 CYP2E1P05181 493 aaPredicted RBP16.51■□□□□ 0.23
LDLRAP1-204ENST00000474283 EIF6P56537 245 aaKnown RBP16.51■□□□□ 0.23
LDLRAP1-204ENST00000474283 USP17L1Q7RTZ2 530 aa16.51■□□□□ 0.23
LDLRAP1-204ENST00000474283 WDR66Q8TBY9 1149 aa16.51■□□□□ 0.23
LDLRAP1-204ENST00000474283 PDS5AQ29RF7 1337 aaKnown RBP16.5■□□□□ 0.23
LDLRAP1-204ENST00000474283 FAM205AQ6ZU69 1335 aa16.5■□□□□ 0.23
LDLRAP1-204ENST00000474283 ECM29Q5VYK3 1845 aa16.5■□□□□ 0.23
LDLRAP1-204ENST00000474283 RBM25P49756 843 aaKnown RBP16.5■□□□□ 0.23
LDLRAP1-204ENST00000474283 MFSD14BQ5SR56 506 aa16.5■□□□□ 0.23
LDLRAP1-204ENST00000474283 CIAPIN1Q6FI81 312 aa16.5■□□□□ 0.23
LDLRAP1-204ENST00000474283 ERICH6Q7L0X2 663 aa16.5■□□□□ 0.23
LDLRAP1-204ENST00000474283 MXD3Q9BW11 206 aa16.5■□□□□ 0.23
LDLRAP1-204ENST00000474283 ANTXR1Q9H6X2 564 aa16.5■□□□□ 0.23
LDLRAP1-204ENST00000474283 PSMD14O00487 310 aa16.49■□□□□ 0.23
LDLRAP1-204ENST00000474283 CXCL9Q07325 125 aa16.49■□□□□ 0.23
LDLRAP1-204ENST00000474283 TTF1Q15361 905 aaPredicted RBP16.49■□□□□ 0.23
LDLRAP1-204ENST00000474283 STRIP1Q5VSL9 837 aa16.49■□□□□ 0.23
LDLRAP1-204ENST00000474283 ZGPATQ8N5A5 531 aaKnown RBP16.49■□□□□ 0.23
LDLRAP1-204ENST00000474283 ZNF784Q8NCA9 323 aaPredicted RBP16.49■□□□□ 0.23
LDLRAP1-204ENST00000474283 TBC1D22AQ8WUA7 517 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms